RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 CTNND1O60716 968 aaKnown RBP13.24□□□□□ -0.29
PRKCB-207ENST00000486868 SLURP2P0DP57 97 aa13.24□□□□□ -0.29
PRKCB-207ENST00000486868 CLK2P49760 499 aaKnown RBP13.24□□□□□ -0.29
PRKCB-207ENST00000486868 JAG1P78504 1218 aa13.24□□□□□ -0.29
PRKCB-207ENST00000486868 SEMA3FQ13275 785 aa13.24□□□□□ -0.29
PRKCB-207ENST00000486868 KIF4BQ2VIQ3 1234 aa13.24□□□□□ -0.29
PRKCB-207ENST00000486868 CT47A1Q5JQC4 288 aaPredicted RBP13.24□□□□□ -0.29
PRKCB-207ENST00000486868 SYDE2Q5VT97 1194 aa13.24□□□□□ -0.29
PRKCB-207ENST00000486868 DCAF15Q66K64 600 aa13.24□□□□□ -0.29
PRKCB-207ENST00000486868 KCTD1Q719H9 257 aa13.24□□□□□ -0.29
PRKCB-207ENST00000486868 FAM160B2Q86V87 743 aa13.24□□□□□ -0.29
PRKCB-207ENST00000486868 CNNM3Q8NE01 707 aa13.24□□□□□ -0.29
PRKCB-207ENST00000486868 CHURC1Q8WUH1 139 aa13.24□□□□□ -0.29
PRKCB-207ENST00000486868 CUL5Q93034 780 aa13.24□□□□□ -0.29
PRKCB-207ENST00000486868 AK8Q96MA6 479 aa13.24□□□□□ -0.29
PRKCB-207ENST00000486868 NAT10Q9H0A0 1025 aaKnown RBP13.24□□□□□ -0.29
PRKCB-207ENST00000486868 CSRNP2Q9H175 543 aa13.24□□□□□ -0.29
PRKCB-207ENST00000486868 CPVLQ9H3G5 476 aa13.24□□□□□ -0.29
PRKCB-207ENST00000486868 VCPKMTQ9H867 229 aa13.24□□□□□ -0.29
PRKCB-207ENST00000486868 MYH8P13535 1937 aa13.23□□□□□ -0.29
PRKCB-207ENST00000486868 A0A1W2PRG0 241 aa13.23□□□□□ -0.29
PRKCB-207ENST00000486868 GCFC2P16383 781 aaKnown RBP13.23□□□□□ -0.29
PRKCB-207ENST00000486868 ATP2B1P20020 1258 aa13.23□□□□□ -0.29
PRKCB-207ENST00000486868 ZNF165P49910 485 aa13.23□□□□□ -0.29
PRKCB-207ENST00000486868 NLRP12P59046 1061 aa13.23□□□□□ -0.29
PRKCB-207ENST00000486868 MDM2Q00987 491 aaPredicted RBP13.23□□□□□ -0.29
PRKCB-207ENST00000486868 AP3B2Q13367 1082 aa13.23□□□□□ -0.29
PRKCB-207ENST00000486868 ZRSR1Q15695 479 aaKnown RBP13.23□□□□□ -0.29
PRKCB-207ENST00000486868 QRICH1Q2TAL8 776 aa13.23□□□□□ -0.29
PRKCB-207ENST00000486868 ANO6Q4KMQ2 910 aa13.23□□□□□ -0.29
PRKCB-207ENST00000486868 NOM1Q5C9Z4 860 aaKnown RBP13.23□□□□□ -0.29
PRKCB-207ENST00000486868 NT5DC1Q5TFE4 455 aa13.23□□□□□ -0.29
PRKCB-207ENST00000486868 TRIML1Q8N9V2 468 aa13.23□□□□□ -0.29
PRKCB-207ENST00000486868 RNF214Q8ND24 703 aa13.23□□□□□ -0.29
PRKCB-207ENST00000486868 AMNQ9BXJ7 453 aa13.23□□□□□ -0.29
PRKCB-207ENST00000486868 GPRC5DQ9NZD1 345 aa13.23□□□□□ -0.29
PRKCB-207ENST00000486868 ZNF112Q9UJU3 913 aa13.23□□□□□ -0.29
PRKCB-207ENST00000486868 PITPNM2Q9BZ72 1349 aa13.22□□□□□ -0.29
PRKCB-207ENST00000486868 WNT7AO00755 349 aa13.22□□□□□ -0.29
PRKCB-207ENST00000486868 SLC26A4O43511 780 aa13.22□□□□□ -0.29
PRKCB-207ENST00000486868 PPP1R11O60927 126 aaPredicted RBP13.22□□□□□ -0.29
PRKCB-207ENST00000486868 FOSP01100 380 aaPredicted RBP13.22□□□□□ -0.29
PRKCB-207ENST00000486868 SLFN14P0C7P3 912 aa13.22□□□□□ -0.29
PRKCB-207ENST00000486868 MCM7P33993 719 aa13.22□□□□□ -0.29
PRKCB-207ENST00000486868 GRIN1Q05586 938 aa13.22□□□□□ -0.29
PRKCB-207ENST00000486868 CDC37Q16543 378 aaPredicted RBP13.22□□□□□ -0.29
PRKCB-207ENST00000486868 INF2Q27J81 1249 aa13.22□□□□□ -0.29
PRKCB-207ENST00000486868 LONRF3Q496Y0 759 aa13.22□□□□□ -0.29
PRKCB-207ENST00000486868 PPP4R3AQ6IN85 833 aa13.22□□□□□ -0.29
PRKCB-207ENST00000486868 MOXD1Q6UVY6 613 aa13.22□□□□□ -0.29
PRKCB-207ENST00000486868 DTHD1Q6ZMT9 781 aa13.22□□□□□ -0.29
PRKCB-207ENST00000486868 SH3RF1Q7Z6J0 888 aa13.22□□□□□ -0.29
PRKCB-207ENST00000486868 CEP57L1Q8IYX8 460 aa13.22□□□□□ -0.29
PRKCB-207ENST00000486868 SPATA20Q8TB22 786 aa13.22□□□□□ -0.29
PRKCB-207ENST00000486868 RASGRP4Q8TDF6 673 aa13.22□□□□□ -0.29
PRKCB-207ENST00000486868 LPAR1Q92633 364 aa13.22□□□□□ -0.29
PRKCB-207ENST00000486868 COA7Q96BR5 231 aa13.22□□□□□ -0.29
PRKCB-207ENST00000486868 CCSER1Q9C0I3 900 aa13.22□□□□□ -0.29
PRKCB-207ENST00000486868 PSTPIP2Q9H939 334 aa13.22□□□□□ -0.29
PRKCB-207ENST00000486868 CBX8Q9HC52 389 aa13.22□□□□□ -0.29
PRKCB-207ENST00000486868 PNMA2Q9UL42 364 aa13.22□□□□□ -0.29
PRKCB-207ENST00000486868 GJA3Q9Y6H8 435 aa13.22□□□□□ -0.29
PRKCB-207ENST00000486868 ZNF541Q9H0D2 1346 aa13.21□□□□□ -0.29
PRKCB-207ENST00000486868 TMEM232C9JQI7 657 aa13.21□□□□□ -0.29
PRKCB-207ENST00000486868 ADAMTS3O15072 1205 aa13.21□□□□□ -0.29
PRKCB-207ENST00000486868 POLR2DO15514 142 aaKnown RBP13.21□□□□□ -0.29
PRKCB-207ENST00000486868 ACTN4O43707 911 aaKnown RBP13.21□□□□□ -0.29
PRKCB-207ENST00000486868 SLC16A2P36021 539 aa13.21□□□□□ -0.29
PRKCB-207ENST00000486868 TXLNAP40222 546 aa13.21□□□□□ -0.29
PRKCB-207ENST00000486868 SARSP49591 514 aaKnown RBP13.21□□□□□ -0.29
PRKCB-207ENST00000486868 USP11P51784 963 aa13.21□□□□□ -0.29
PRKCB-207ENST00000486868 STAT2P52630 851 aa13.21□□□□□ -0.29
PRKCB-207ENST00000486868 IQCB1Q15051 598 aa13.21□□□□□ -0.29
PRKCB-207ENST00000486868 SHROOM1Q2M3G4 852 aaPredicted RBP13.21□□□□□ -0.29
PRKCB-207ENST00000486868 ARHGAP27Q6ZUM4 889 aa13.21□□□□□ -0.29
PRKCB-207ENST00000486868 FBXO11Q86XK2 927 aa13.21□□□□□ -0.29
PRKCB-207ENST00000486868 IQUBQ8NA54 791 aa13.21□□□□□ -0.29
PRKCB-207ENST00000486868 TBCKQ8TEA7 893 aa13.21□□□□□ -0.29
PRKCB-207ENST00000486868 SYMPKQ92797 1274 aaKnown RBP13.21□□□□□ -0.29
PRKCB-207ENST00000486868 ZNF341Q9BYN7 854 aa13.21□□□□□ -0.29
PRKCB-207ENST00000486868 FHDC1Q9C0D6 1143 aaPredicted RBP13.21□□□□□ -0.29
PRKCB-207ENST00000486868 KIAA1683Q9H0B3 1180 aa13.21□□□□□ -0.29
PRKCB-207ENST00000486868 DEFB129Q9H1M3 183 aa13.21□□□□□ -0.29
PRKCB-207ENST00000486868 CUEDC2Q9H467 287 aa13.21□□□□□ -0.29
PRKCB-207ENST00000486868 HACL1Q9UJ83 578 aa13.21□□□□□ -0.29
PRKCB-207ENST00000486868 FEM1BQ9UK73 627 aa13.21□□□□□ -0.29
PRKCB-207ENST00000486868 PCDHA1Q9Y5I3 950 aa13.21□□□□□ -0.29
PRKCB-207ENST00000486868 CYP3A7-CYP3A51PA0A087WV96 503 aa13.2□□□□□ -0.3
PRKCB-207ENST00000486868 SHTN1A0MZ66 631 aa13.2□□□□□ -0.3
PRKCB-207ENST00000486868 VWA3AA6NCI4 1184 aa13.2□□□□□ -0.3
PRKCB-207ENST00000486868 PIK3CDO00329 1044 aa13.2□□□□□ -0.3
PRKCB-207ENST00000486868 NEMFO60524 1076 aa13.2□□□□□ -0.3
PRKCB-207ENST00000486868 MYL1P05976 194 aa13.2□□□□□ -0.3
PRKCB-207ENST00000486868 OR52Z1P0C646 297 aa13.2□□□□□ -0.3
PRKCB-207ENST00000486868 FDX1P10109 184 aa13.2□□□□□ -0.3
PRKCB-207ENST00000486868 CYP3A7P24462 503 aa13.2□□□□□ -0.3
PRKCB-207ENST00000486868 POSTNQ15063 836 aa13.2□□□□□ -0.3
PRKCB-207ENST00000486868 SAMD7Q7Z3H4 446 aa13.2□□□□□ -0.3
PRKCB-207ENST00000486868 ACER1Q8TDN7 264 aa13.2□□□□□ -0.3
PRKCB-207ENST00000486868 WDR18Q9BV38 432 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms