RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 TTC39BQ5VTQ0 682 aaPredicted RBP8.37□□□□□ -1.07
TMEM39A-209ENST00000486235 MOB2Q70IA6 237 aa8.37□□□□□ -1.07
TMEM39A-209ENST00000486235 ARMC10Q8N2F6 343 aa8.37□□□□□ -1.07
TMEM39A-209ENST00000486235 TBC1D16Q8TBP0 767 aa8.37□□□□□ -1.07
TMEM39A-209ENST00000486235 SH2B1Q9NRF2 756 aaPredicted RBP8.37□□□□□ -1.07
TMEM39A-209ENST00000486235 CHPF2Q9P2E5 772 aa8.37□□□□□ -1.07
TMEM39A-209ENST00000486235 HDAC9Q9UKV0 1011 aa8.37□□□□□ -1.07
TMEM39A-209ENST00000486235 SCAF8Q9UPN6 1271 aaKnown RBP8.37□□□□□ -1.07
TMEM39A-209ENST00000486235 LRRC37AA6NMS7 1700 aa8.37□□□□□ -1.07
TMEM39A-209ENST00000486235 POLR2AP24928 1970 aaKnown RBP8.37□□□□□ -1.07
TMEM39A-209ENST00000486235 DDX3YO15523 660 aaKnown RBP8.36□□□□□ -1.07
TMEM39A-209ENST00000486235 COBLO75128 1261 aa8.36□□□□□ -1.07
TMEM39A-209ENST00000486235 UFL1O94874 794 aa8.36□□□□□ -1.07
TMEM39A-209ENST00000486235 TBC1D8O95759 1140 aa8.36□□□□□ -1.07
TMEM39A-209ENST00000486235 SF3B3Q15393 1217 aaKnown RBP8.36□□□□□ -1.07
TMEM39A-209ENST00000486235 OCLNQ16625 522 aa8.36□□□□□ -1.07
TMEM39A-209ENST00000486235 GPR152Q8TDT2 470 aa8.36□□□□□ -1.07
TMEM39A-209ENST00000486235 ISCA1Q9BUE6 129 aa8.36□□□□□ -1.07
TMEM39A-209ENST00000486235 KRTAP9-9Q9BYP9 154 aa8.36□□□□□ -1.07
TMEM39A-209ENST00000486235 KRTAP9-4Q9BYQ2 154 aa8.36□□□□□ -1.07
TMEM39A-209ENST00000486235 ZC3H12CQ9C0D7 883 aaKnown RBP8.36□□□□□ -1.07
TMEM39A-209ENST00000486235 PNNQ9H307 717 aaKnown RBP8.36□□□□□ -1.07
TMEM39A-209ENST00000486235 LAS1LQ9Y4W2 734 aaKnown RBP8.36□□□□□ -1.07
TMEM39A-209ENST00000486235 OAS3Q9Y6K5 1087 aaKnown RBP8.36□□□□□ -1.07
TMEM39A-209ENST00000486235 UBE2Q2LH0YL09 131 aa8.35□□□□□ -1.07
TMEM39A-209ENST00000486235 IRS4O14654 1257 aaPredicted RBP8.35□□□□□ -1.07
TMEM39A-209ENST00000486235 TNFRSF10BO14763 440 aa8.35□□□□□ -1.07
TMEM39A-209ENST00000486235 SMNDC1O75940 238 aaKnown RBP eCLIP8.35□□□□□ -1.07
TMEM39A-209ENST00000486235 CYP2E1P05181 493 aaPredicted RBP8.35□□□□□ -1.07
TMEM39A-209ENST00000486235 VIL1P09327 827 aaKnown RBP8.35□□□□□ -1.07
TMEM39A-209ENST00000486235 IRAK1P51617 712 aa8.35□□□□□ -1.07
TMEM39A-209ENST00000486235 RPS8P62241 208 aaKnown RBP8.35□□□□□ -1.07
TMEM39A-209ENST00000486235 PRAMEF18Q5VWM3 479 aa8.35□□□□□ -1.07
TMEM39A-209ENST00000486235 TRIM42Q8IWZ5 723 aa8.35□□□□□ -1.07
TMEM39A-209ENST00000486235 CACTIN-AS1Q8N1I8 211 aa8.35□□□□□ -1.07
TMEM39A-209ENST00000486235 PLBD2Q8NHP8 589 aa8.35□□□□□ -1.07
TMEM39A-209ENST00000486235 STK32AQ8WU08 396 aa8.35□□□□□ -1.07
TMEM39A-209ENST00000486235 ZNF296Q8WUU4 475 aaPredicted RBP8.35□□□□□ -1.07
TMEM39A-209ENST00000486235 UTP4Q969X6 686 aaKnown RBP8.35□□□□□ -1.07
TMEM39A-209ENST00000486235 SEC31BQ9NQW1 1179 aa8.35□□□□□ -1.07
TMEM39A-209ENST00000486235 ZMIZ1Q9ULJ6 1067 aa8.35□□□□□ -1.07
TMEM39A-209ENST00000486235 AKAP11Q9UKA4 1901 aa8.35□□□□□ -1.07
TMEM39A-209ENST00000486235 DDX60Q8IY21 1712 aaKnown RBP8.34□□□□□ -1.07
TMEM39A-209ENST00000486235 SCN9AQ15858 1988 aa8.34□□□□□ -1.07
TMEM39A-209ENST00000486235 HMX2A2RU54 273 aa8.34□□□□□ -1.07
TMEM39A-209ENST00000486235 FSCN2O14926 492 aa8.34□□□□□ -1.07
TMEM39A-209ENST00000486235 GSC2O15499 205 aa8.34□□□□□ -1.07
TMEM39A-209ENST00000486235 PAX4O43316 350 aa8.34□□□□□ -1.07
TMEM39A-209ENST00000486235 TMPOP42166 694 aaKnown RBP8.34□□□□□ -1.07
TMEM39A-209ENST00000486235 ZAP70P43403 619 aa8.34□□□□□ -1.07
TMEM39A-209ENST00000486235 ZNF280AP59817 542 aaPredicted RBP8.34□□□□□ -1.07
TMEM39A-209ENST00000486235 LMOD3Q0VAK6 560 aa8.34□□□□□ -1.07
TMEM39A-209ENST00000486235 DUOXA2Q1HG44 320 aa8.34□□□□□ -1.07
TMEM39A-209ENST00000486235 SWI5Q1ZZU3 235 aa8.34□□□□□ -1.07
TMEM39A-209ENST00000486235 KIAA1211Q6ZU35 1233 aa8.34□□□□□ -1.07
TMEM39A-209ENST00000486235 CCDC82Q8N4S0 544 aa8.34□□□□□ -1.07
TMEM39A-209ENST00000486235 UBASH3BQ8TF42 649 aa8.34□□□□□ -1.07
TMEM39A-209ENST00000486235 JARID2Q92833 1246 aaPredicted RBP8.34□□□□□ -1.07
TMEM39A-209ENST00000486235 CEP41Q9BYV8 373 aa8.34□□□□□ -1.07
TMEM39A-209ENST00000486235 C7orf69Q9H7B7 122 aa8.34□□□□□ -1.07
TMEM39A-209ENST00000486235 BABAM1Q9NWV8 329 aa8.34□□□□□ -1.07
TMEM39A-209ENST00000486235 ZBTB39O15060 712 aa8.33□□□□□ -1.08
TMEM39A-209ENST00000486235 ADAMTS4O75173 837 aa8.33□□□□□ -1.08
TMEM39A-209ENST00000486235 EPHA1P21709 976 aa8.33□□□□□ -1.08
TMEM39A-209ENST00000486235 GP2P55259 537 aaKnown RBP8.33□□□□□ -1.08
TMEM39A-209ENST00000486235 FKBP1BP68106 108 aa8.33□□□□□ -1.08
TMEM39A-209ENST00000486235 NFIAQ12857 509 aa8.33□□□□□ -1.08
TMEM39A-209ENST00000486235 ZDHHC13Q8IUH4 622 aa8.33□□□□□ -1.08
TMEM39A-209ENST00000486235 CCDC146Q8IYE0 955 aa8.33□□□□□ -1.08
TMEM39A-209ENST00000486235 AGBL3Q8NEM8 1001 aa8.33□□□□□ -1.08
TMEM39A-209ENST00000486235 MYOZ2Q9NPC6 264 aa8.33□□□□□ -1.08
TMEM39A-209ENST00000486235 PAPPA2Q9BXP8 1791 aa8.33□□□□□ -1.08
TMEM39A-209ENST00000486235 CHL1O00533 1208 aa8.32□□□□□ -1.08
TMEM39A-209ENST00000486235 TM4SF5O14894 197 aa8.32□□□□□ -1.08
TMEM39A-209ENST00000486235 PRKG1Q13976 671 aa8.32□□□□□ -1.08
TMEM39A-209ENST00000486235 PKN2Q16513 984 aaKnown RBP8.32□□□□□ -1.08
TMEM39A-209ENST00000486235 FAM117BQ6P1L5 589 aa8.32□□□□□ -1.08
TMEM39A-209ENST00000486235 NCAPG2Q86XI2 1143 aa8.32□□□□□ -1.08
TMEM39A-209ENST00000486235 KLHDC7BQ96G42 594 aa8.32□□□□□ -1.08
TMEM39A-209ENST00000486235 MXD3Q9BW11 206 aa8.32□□□□□ -1.08
TMEM39A-209ENST00000486235 FAM13BQ9NYF5 915 aa8.32□□□□□ -1.08
TMEM39A-209ENST00000486235 DBF4Q9UBU7 674 aaPredicted RBP8.32□□□□□ -1.08
TMEM39A-209ENST00000486235 FNDC3AQ9Y2H6 1198 aaKnown RBP8.32□□□□□ -1.08
TMEM39A-209ENST00000486235 TNRC18O15417 2968 aaPredicted RBP8.31□□□□□ -1.08
TMEM39A-209ENST00000486235 PITPNM2Q9BZ72 1349 aa8.31□□□□□ -1.08
TMEM39A-209ENST00000486235 WTIPA6NIX2 430 aaPredicted RBP8.31□□□□□ -1.08
TMEM39A-209ENST00000486235 KIAA1324LA8MWY0 1029 aaPredicted RBP8.31□□□□□ -1.08
TMEM39A-209ENST00000486235 ADAM11O75078 769 aa8.31□□□□□ -1.08
TMEM39A-209ENST00000486235 TAL1P17542 331 aaPredicted RBP8.31□□□□□ -1.08
TMEM39A-209ENST00000486235 NBPF9Q3BBW0 867 aa8.31□□□□□ -1.08
TMEM39A-209ENST00000486235 CCDC152Q4G0S7 254 aa8.31□□□□□ -1.08
TMEM39A-209ENST00000486235 FBXO46Q6PJ61 603 aaPredicted RBP8.31□□□□□ -1.08
TMEM39A-209ENST00000486235 ZBTB38Q8NAP3 1195 aaPredicted RBP8.31□□□□□ -1.08
TMEM39A-209ENST00000486235 FOXD4L4Q8WXT5 416 aaPredicted RBP8.31□□□□□ -1.08
TMEM39A-209ENST00000486235 FAM46AQ96IP4 442 aaKnown RBP8.31□□□□□ -1.08
TMEM39A-209ENST00000486235 GMLQ99445 158 aa8.31□□□□□ -1.08
TMEM39A-209ENST00000486235 MYD88Q99836 296 aa8.31□□□□□ -1.08
TMEM39A-209ENST00000486235 PBX4Q9BYU1 374 aa8.31□□□□□ -1.08
TMEM39A-209ENST00000486235 R3HDMLQ9H3Y0 253 aa8.31□□□□□ -1.08
TMEM39A-209ENST00000486235 HYPKQ9NX55 129 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms