RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 GMCL1Q96IK5 515 aa15.17■□□□□ 0.02
SSR4-211ENST00000486204 ZSCAN10Q96SZ4 725 aaPredicted RBP15.17■□□□□ 0.02
SSR4-211ENST00000486204 BTBD7Q9P203 1132 aa15.17■□□□□ 0.02
SSR4-211ENST00000486204 ADAMTS5Q9UNA0 930 aa15.17■□□□□ 0.02
SSR4-211ENST00000486204 ATP11BQ9Y2G3 1177 aa15.17■□□□□ 0.02
SSR4-211ENST00000486204 TTC28Q96AY4 2481 aa15.16■□□□□ 0.02
SSR4-211ENST00000486204 RAD21O60216 631 aa15.16■□□□□ 0.02
SSR4-211ENST00000486204 FLOT1O75955 427 aa15.16■□□□□ 0.02
SSR4-211ENST00000486204 REC8O95072 547 aa15.16■□□□□ 0.02
SSR4-211ENST00000486204 MAPK4P31152 587 aa15.16■□□□□ 0.02
SSR4-211ENST00000486204 HSPA4P34932 840 aa15.16■□□□□ 0.02
SSR4-211ENST00000486204 GRIN2CQ14957 1233 aa15.16■□□□□ 0.02
SSR4-211ENST00000486204 TSGA10IPQ3SY00 556 aa15.16■□□□□ 0.02
SSR4-211ENST00000486204 CCAR1Q8IX12 1150 aaKnown RBP15.16■□□□□ 0.02
SSR4-211ENST00000486204 ATG4CQ96DT6 458 aa15.16■□□□□ 0.02
SSR4-211ENST00000486204 PRDM5Q9NQX1 630 aaPredicted RBP15.16■□□□□ 0.02
SSR4-211ENST00000486204 PPP1R9AQ9ULJ8 1098 aa15.16■□□□□ 0.02
SSR4-211ENST00000486204 MCM3APO60318 1980 aa15.15■□□□□ 0.02
SSR4-211ENST00000486204 EPB41L2O43491 1005 aaKnown RBP15.15■□□□□ 0.02
SSR4-211ENST00000486204 SNHG28P0DPA3 235 aa15.15■□□□□ 0.02
SSR4-211ENST00000486204 ERVK-9P63128 1117 aa15.15■□□□□ 0.02
SSR4-211ENST00000486204 ERVK-24P63145 666 aa15.15■□□□□ 0.02
SSR4-211ENST00000486204 TRDNQ13061 729 aa15.15■□□□□ 0.02
SSR4-211ENST00000486204 Q3C1V9 767 aa15.15■□□□□ 0.02
SSR4-211ENST00000486204 CCDC178Q5BJE1 867 aa15.15■□□□□ 0.02
SSR4-211ENST00000486204 MORN1Q5T089 497 aa15.15■□□□□ 0.02
SSR4-211ENST00000486204 RALYLQ86SE5 291 aaKnown RBP15.15■□□□□ 0.02
SSR4-211ENST00000486204 ATXN2LQ8WWM7 1075 aaKnown RBP15.15■□□□□ 0.02
SSR4-211ENST00000486204 PAGR1Q9BTK6 254 aa15.15■□□□□ 0.02
SSR4-211ENST00000486204 DDX20Q9UHI6 824 aaKnown RBP15.15■□□□□ 0.02
SSR4-211ENST00000486204 RABGAP1Q9Y3P9 1069 aa15.15■□□□□ 0.02
SSR4-211ENST00000486204 GTF3C3Q9Y5Q9 886 aa15.15■□□□□ 0.02
SSR4-211ENST00000486204 FRMPD3Q5JV73 1810 aa15.15■□□□□ 0.02
SSR4-211ENST00000486204 DNM1LO00429 736 aa15.14■□□□□ 0.01
SSR4-211ENST00000486204 PDHBP11177 359 aa15.14■□□□□ 0.01
SSR4-211ENST00000486204 BMP3P12645 472 aa15.14■□□□□ 0.01
SSR4-211ENST00000486204 MCCP23508 829 aa15.14■□□□□ 0.01
SSR4-211ENST00000486204 ADCK5Q3MIX3 580 aa15.14■□□□□ 0.01
SSR4-211ENST00000486204 RNF20Q5VTR2 975 aa15.14■□□□□ 0.01
SSR4-211ENST00000486204 CHST3Q7LGC8 479 aa15.14■□□□□ 0.01
SSR4-211ENST00000486204 GPR142Q7Z601 462 aa15.14■□□□□ 0.01
SSR4-211ENST00000486204 PLEKHH3Q7Z736 793 aa15.14■□□□□ 0.01
SSR4-211ENST00000486204 PNMA1Q8ND90 353 aa15.14■□□□□ 0.01
SSR4-211ENST00000486204 REPS2Q8NFH8 660 aa15.14■□□□□ 0.01
SSR4-211ENST00000486204 DCAF4Q8WV16 495 aa15.14■□□□□ 0.01
SSR4-211ENST00000486204 APBA2Q99767 749 aa15.14■□□□□ 0.01
SSR4-211ENST00000486204 SLF1Q9BQI6 1058 aa15.14■□□□□ 0.01
SSR4-211ENST00000486204 UBAC1Q9BSL1 405 aa15.14■□□□□ 0.01
SSR4-211ENST00000486204 SENP2Q9HC62 589 aa15.14■□□□□ 0.01
SSR4-211ENST00000486204 HOXC10Q9NYD6 342 aa15.14■□□□□ 0.01
SSR4-211ENST00000486204 CNGA1P29973 690 aa15.13■□□□□ 0.01
SSR4-211ENST00000486204 SLC1A4P43007 532 aa15.13■□□□□ 0.01
SSR4-211ENST00000486204 MFSD14CQ5VZR4 134 aa15.13■□□□□ 0.01
SSR4-211ENST00000486204 KCTD1Q719H9 257 aa15.13■□□□□ 0.01
SSR4-211ENST00000486204 ADAMTS19Q8TE59 1207 aa15.13■□□□□ 0.01
SSR4-211ENST00000486204 CHMP4CQ96CF2 233 aa15.13■□□□□ 0.01
SSR4-211ENST00000486204 ASB2Q96Q27 587 aa15.13■□□□□ 0.01
SSR4-211ENST00000486204 USP26Q9BXU7 913 aa15.13■□□□□ 0.01
SSR4-211ENST00000486204 PORCNQ9H237 461 aa15.13■□□□□ 0.01
SSR4-211ENST00000486204 FEM1BQ9UK73 627 aa15.13■□□□□ 0.01
SSR4-211ENST00000486204 ZNF214Q9UL59 606 aaPredicted RBP15.13■□□□□ 0.01
SSR4-211ENST00000486204 TMEM232C9JQI7 657 aa15.12■□□□□ 0.01
SSR4-211ENST00000486204 VWA5AO00534 786 aa15.12■□□□□ 0.01
SSR4-211ENST00000486204 MSCO60682 206 aa15.12■□□□□ 0.01
SSR4-211ENST00000486204 PLA2G6O60733 806 aa15.12■□□□□ 0.01
SSR4-211ENST00000486204 STAT2P52630 851 aa15.12■□□□□ 0.01
SSR4-211ENST00000486204 TMEM132BQ14DG7 1078 aa15.12■□□□□ 0.01
SSR4-211ENST00000486204 SLC39A5Q6ZMH5 540 aa15.12■□□□□ 0.01
SSR4-211ENST00000486204 MB21D1Q8N884 522 aa15.12■□□□□ 0.01
SSR4-211ENST00000486204 PRPF38AQ8NAV1 312 aaKnown RBP15.12■□□□□ 0.01
SSR4-211ENST00000486204 IGDCC4Q8TDY8 1250 aa15.12■□□□□ 0.01
SSR4-211ENST00000486204 PPM1EQ8WY54 764 aa15.12■□□□□ 0.01
SSR4-211ENST00000486204 RNPC3Q96LT9 517 aaKnown RBP15.12■□□□□ 0.01
SSR4-211ENST00000486204 MTA3Q9BTC8 594 aa15.12■□□□□ 0.01
SSR4-211ENST00000486204 CWC22Q9HCG8 908 aaKnown RBP15.12■□□□□ 0.01
SSR4-211ENST00000486204 GPHNQ9NQX3 736 aaPredicted RBP15.12■□□□□ 0.01
SSR4-211ENST00000486204 MTMR7Q9Y216 660 aa15.12■□□□□ 0.01
SSR4-211ENST00000486204 SNX14Q9Y5W7 946 aa15.12■□□□□ 0.01
SSR4-211ENST00000486204 LTBP2Q14767 1821 aa15.12■□□□□ 0.01
SSR4-211ENST00000486204 IFIT3O14879 490 aaKnown RBP15.11■□□□□ 0.01
SSR4-211ENST00000486204 PRC1O43663 620 aa15.11■□□□□ 0.01
SSR4-211ENST00000486204 MCM5P33992 734 aa15.11■□□□□ 0.01
SSR4-211ENST00000486204 ZNF543Q08ER8 600 aa15.11■□□□□ 0.01
SSR4-211ENST00000486204 C8orf34Q49A92 452 aa15.11■□□□□ 0.01
SSR4-211ENST00000486204 GJC2Q5T442 439 aaPredicted RBP15.11■□□□□ 0.01
SSR4-211ENST00000486204 IFIT1BQ5T764 474 aaKnown RBP15.11■□□□□ 0.01
SSR4-211ENST00000486204 TTBK2Q6IQ55 1244 aa15.11■□□□□ 0.01
SSR4-211ENST00000486204 SAMD1Q6SPF0 538 aaPredicted RBP15.11■□□□□ 0.01
SSR4-211ENST00000486204 BTNL9Q6UXG8 535 aa15.11■□□□□ 0.01
SSR4-211ENST00000486204 UHRF1Q96T88 793 aaPredicted RBP15.11■□□□□ 0.01
SSR4-211ENST00000486204 MOV10L1Q9BXT6 1211 aaKnown RBP15.11■□□□□ 0.01
SSR4-211ENST00000486204 SPATC1LQ9H0A9 340 aa15.11■□□□□ 0.01
SSR4-211ENST00000486204 KAT14Q9H8E8 782 aa15.11■□□□□ 0.01
SSR4-211ENST00000486204 LY9Q9HBG7 655 aa15.11■□□□□ 0.01
SSR4-211ENST00000486204 FRMPD2Q68DX3 1309 aaPredicted RBP15.11■□□□□ 0.01
SSR4-211ENST00000486204 LRRC37A2A6NM11 1700 aa15.1■□□□□ 0.01
SSR4-211ENST00000486204 TRIM43BA6NCK2 446 aa15.1■□□□□ 0.01
SSR4-211ENST00000486204 SH2B2O14492 632 aaPredicted RBP15.1■□□□□ 0.01
SSR4-211ENST00000486204 MAP2K5Q13163 448 aa15.1■□□□□ 0.01
SSR4-211ENST00000486204 WTAPQ15007 396 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms