RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 GJC2Q5T442 439 aaPredicted RBP25.86■■□□□ 1.73
HLA-F-228ENST00000486194 BTNL9Q6UXG8 535 aa25.86■■□□□ 1.73
HLA-F-228ENST00000486194 IQCA1Q86XH1 822 aa25.86■■□□□ 1.73
HLA-F-228ENST00000486194 RUFY2Q8WXA3 655 aa25.86■■□□□ 1.73
HLA-F-228ENST00000486194 PRO3102Q9H379 93 aa25.86■■□□□ 1.73
HLA-F-228ENST00000486194 RNF146Q9NTX7 359 aa25.86■■□□□ 1.73
HLA-F-228ENST00000486194 ZNF536O15090 1300 aa25.86■■□□□ 1.73
HLA-F-228ENST00000486194 RAD50Q92878 1312 aa25.86■■□□□ 1.73
HLA-F-228ENST00000486194 ALPK3Q96L96 1907 aa25.85■■□□□ 1.73
HLA-F-228ENST00000486194 ZNF865P0CJ78 1059 aaPredicted RBP25.85■■□□□ 1.73
HLA-F-228ENST00000486194 DGKHQ86XP1 1220 aa25.85■■□□□ 1.73
HLA-F-228ENST00000486194 AGBL1Q96MI9 1066 aa25.85■■□□□ 1.73
HLA-F-228ENST00000486194 TRERF1Q96PN7 1200 aa25.85■■□□□ 1.73
HLA-F-228ENST00000486194 XPNPEP3Q9NQH7 507 aa25.85■■□□□ 1.73
HLA-F-228ENST00000486194 ZMYND8Q9ULU4 1186 aaPredicted RBP25.85■■□□□ 1.73
HLA-F-228ENST00000486194 PLXNA1Q9UIW2 1896 aa25.85■■□□□ 1.73
HLA-F-228ENST00000486194 NEDD4P46934 1319 aa25.85■■□□□ 1.73
HLA-F-228ENST00000486194 MYCNP04198 464 aaPredicted RBP25.84■■□□□ 1.73
HLA-F-228ENST00000486194 ALAS1P13196 640 aa25.84■■□□□ 1.73
HLA-F-228ENST00000486194 GSPT1P15170 499 aaKnown RBP25.84■■□□□ 1.73
HLA-F-228ENST00000486194 FXR1P51114 621 aaKnown RBP eCLIP25.84■■□□□ 1.73
HLA-F-228ENST00000486194 CCDC174Q6PII3 467 aa25.84■■□□□ 1.73
HLA-F-228ENST00000486194 RNF180Q86T96 592 aa25.84■■□□□ 1.73
HLA-F-228ENST00000486194 PNMA2Q9UL42 364 aa25.84■■□□□ 1.73
HLA-F-228ENST00000486194 FAM184BQ9ULE4 1060 aa25.84■■□□□ 1.73
HLA-F-228ENST00000486194 POTEB2H3BUK9 544 aa25.83■■□□□ 1.73
HLA-F-228ENST00000486194 PDHBP11177 359 aa25.83■■□□□ 1.73
HLA-F-228ENST00000486194 LRRC41Q15345 812 aa25.83■■□□□ 1.73
HLA-F-228ENST00000486194 SYDE2Q5VT97 1194 aa25.83■■□□□ 1.73
HLA-F-228ENST00000486194 RANBP17Q9H2T7 1088 aaKnown RBP25.83■■□□□ 1.73
HLA-F-228ENST00000486194 CNNM2Q9H8M5 875 aa25.83■■□□□ 1.73
HLA-F-228ENST00000486194 CCPG1Q9ULG6 757 aa25.83■■□□□ 1.73
HLA-F-228ENST00000486194 SNAI1O95863 264 aaPredicted RBP25.82■■□□□ 1.72
HLA-F-228ENST00000486194 ICAM1P05362 532 aa25.82■■□□□ 1.72
HLA-F-228ENST00000486194 TAL1P17542 331 aaPredicted RBP25.82■■□□□ 1.72
HLA-F-228ENST00000486194 BMP8BP34820 402 aa25.82■■□□□ 1.72
HLA-F-228ENST00000486194 RASGRP2Q7LDG7 609 aa25.82■■□□□ 1.72
HLA-F-228ENST00000486194 KRT23Q9C075 422 aa25.82■■□□□ 1.72
HLA-F-228ENST00000486194 ABHD16BQ9H3Z7 469 aa25.82■■□□□ 1.72
HLA-F-228ENST00000486194 A1CFQ9NQ94 594 aaKnown RBP25.82■■□□□ 1.72
HLA-F-228ENST00000486194 KDM4AO75164 1064 aa25.81■■□□□ 1.72
HLA-F-228ENST00000486194 SYN1P17600 705 aa25.81■■□□□ 1.72
HLA-F-228ENST00000486194 GPATCH4Q5T3I0 446 aaKnown RBP25.81■■□□□ 1.72
HLA-F-228ENST00000486194 GDF15Q99988 308 aa25.81■■□□□ 1.72
HLA-F-228ENST00000486194 GPCPD1Q9NPB8 672 aa25.81■■□□□ 1.72
HLA-F-228ENST00000486194 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.81■■□□□ 1.72
HLA-F-228ENST00000486194 ZHX1Q9UKY1 873 aaPredicted RBP25.81■■□□□ 1.72
HLA-F-228ENST00000486194 FRMPD2Q68DX3 1309 aaPredicted RBP25.81■■□□□ 1.72
HLA-F-228ENST00000486194 LAMA4Q16363 1823 aa25.8■■□□□ 1.72
HLA-F-228ENST00000486194 SNHG28P0DPA3 235 aa25.8■■□□□ 1.72
HLA-F-228ENST00000486194 SLC16A2P36021 539 aa25.8■■□□□ 1.72
HLA-F-228ENST00000486194 ATN1P54259 1190 aaPredicted RBP25.8■■□□□ 1.72
HLA-F-228ENST00000486194 ZNF543Q08ER8 600 aa25.8■■□□□ 1.72
HLA-F-228ENST00000486194 ACVR2BQ13705 512 aa25.8■■□□□ 1.72
HLA-F-228ENST00000486194 TTBK2Q6IQ55 1244 aa25.8■■□□□ 1.72
HLA-F-228ENST00000486194 FAM133AQ8N9E0 248 aa25.8■■□□□ 1.72
HLA-F-228ENST00000486194 ASB14A6NK59 587 aa25.79■■□□□ 1.72
HLA-F-228ENST00000486194 B4E1Z4 1266 aa25.79■■□□□ 1.72
HLA-F-228ENST00000486194 SNAP25P60880 206 aa25.79■■□□□ 1.72
HLA-F-228ENST00000486194 SLC39A5Q6ZMH5 540 aa25.79■■□□□ 1.72
HLA-F-228ENST00000486194 ARMCX2Q7L311 632 aa25.79■■□□□ 1.72
HLA-F-228ENST00000486194 ZSCAN10Q96SZ4 725 aaPredicted RBP25.79■■□□□ 1.72
HLA-F-228ENST00000486194 ZKSCAN3Q9BRR0 538 aa25.79■■□□□ 1.72
HLA-F-228ENST00000486194 KAT14Q9H8E8 782 aa25.79■■□□□ 1.72
HLA-F-228ENST00000486194 PRKAG2Q9UGJ0 569 aa25.79■■□□□ 1.72
HLA-F-228ENST00000486194 PGK1P00558 417 aa25.78■■□□□ 1.72
HLA-F-228ENST00000486194 ADCYAP1R1P41586 468 aa25.78■■□□□ 1.72
HLA-F-228ENST00000486194 RTP1P59025 263 aa25.78■■□□□ 1.72
HLA-F-228ENST00000486194 CNTN2Q02246 1040 aa25.78■■□□□ 1.72
HLA-F-228ENST00000486194 ANKS1AQ92625 1134 aa25.78■■□□□ 1.72
HLA-F-228ENST00000486194 FGD4Q96M96 766 aa25.78■■□□□ 1.72
HLA-F-228ENST00000486194 PHF24Q9UPV7 400 aa25.78■■□□□ 1.72
HLA-F-228ENST00000486194 DUSP11O75319 330 aaKnown RBP25.77■■□□□ 1.72
HLA-F-228ENST00000486194 CHMLP26374 656 aa25.77■■□□□ 1.72
HLA-F-228ENST00000486194 MAGEA10P43363 369 aaPredicted RBP25.77■■□□□ 1.72
HLA-F-228ENST00000486194 CCDC144CPQ8IYA2 1237 aa25.77■■□□□ 1.72
HLA-F-228ENST00000486194 PNMA1Q8ND90 353 aa25.77■■□□□ 1.72
HLA-F-228ENST00000486194 UBAC1Q9BSL1 405 aa25.77■■□□□ 1.72
HLA-F-228ENST00000486194 TSEN34Q9BSV6 310 aaKnown RBP25.77■■□□□ 1.72
HLA-F-228ENST00000486194 SPC25Q9HBM1 224 aa25.77■■□□□ 1.72
HLA-F-228ENST00000486194 CYP39A1Q9NYL5 469 aa25.77■■□□□ 1.72
HLA-F-228ENST00000486194 ZSWIM5Q9P217 1185 aa25.77■■□□□ 1.72
HLA-F-228ENST00000486194 SNX17Q15036 470 aa25.76■■□□□ 1.71
HLA-F-228ENST00000486194 MUM1L1Q5H9M0 696 aa25.76■■□□□ 1.71
HLA-F-228ENST00000486194 C1orf53Q5VUE5 145 aa25.76■■□□□ 1.71
HLA-F-228ENST00000486194 NSMFQ6X4W1 530 aa25.76■■□□□ 1.71
HLA-F-228ENST00000486194 IL25Q9H293 177 aa25.76■■□□□ 1.71
HLA-F-228ENST00000486194 ATP11BQ9Y2G3 1177 aa25.76■■□□□ 1.71
HLA-F-228ENST00000486194 ADAMTS4O75173 837 aa25.75■■□□□ 1.71
HLA-F-228ENST00000486194 TRDNQ13061 729 aa25.75■■□□□ 1.71
HLA-F-228ENST00000486194 CCDC144BQ3MJ40 725 aa25.75■■□□□ 1.71
HLA-F-228ENST00000486194 FERMT2Q96AC1 680 aa25.75■■□□□ 1.71
HLA-F-228ENST00000486194 LBHD1Q9BQE6 289 aaPredicted RBP25.75■■□□□ 1.71
HLA-F-228ENST00000486194 PCDH10Q9P2E7 1040 aa25.75■■□□□ 1.71
HLA-F-228ENST00000486194 U3KPZ7 1027 aaPredicted RBP25.75■■□□□ 1.71
HLA-F-228ENST00000486194 TNKSO95271 1327 aa25.74■■□□□ 1.71
HLA-F-228ENST00000486194 WDR19Q8NEZ3 1342 aa25.74■■□□□ 1.71
HLA-F-228ENST00000486194 SYNRGQ9UMZ2 1314 aa25.74■■□□□ 1.71
HLA-F-228ENST00000486194 SOWAHBA6NEL2 793 aa25.74■■□□□ 1.71
HLA-F-228ENST00000486194 ENAHQ8N8S7 591 aaPredicted RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms