RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 CNPY2Q9Y2B0 182 aa20.74■□□□□ 0.91
COL6A1-204ENST00000486023 DIS3Q9Y2L1 958 aaKnown RBP20.74■□□□□ 0.91
COL6A1-204ENST00000486023 ZNF536O15090 1300 aa20.74■□□□□ 0.91
COL6A1-204ENST00000486023 SEPT4O43236 478 aa20.73■□□□□ 0.91
COL6A1-204ENST00000486023 PLA2G6O60733 806 aa20.73■□□□□ 0.91
COL6A1-204ENST00000486023 IGHA2P01877 340 aa20.73■□□□□ 0.91
COL6A1-204ENST00000486023 PDHBP11177 359 aa20.73■□□□□ 0.91
COL6A1-204ENST00000486023 ATN1P54259 1190 aaPredicted RBP20.73■□□□□ 0.91
COL6A1-204ENST00000486023 UBAC1Q9BSL1 405 aa20.73■□□□□ 0.91
COL6A1-204ENST00000486023 ZHX1Q9UKY1 873 aaPredicted RBP20.73■□□□□ 0.91
COL6A1-204ENST00000486023 ZMYND8Q9ULU4 1186 aaPredicted RBP20.73■□□□□ 0.91
COL6A1-204ENST00000486023 PARP14Q460N5 1801 aa20.72■□□□□ 0.91
COL6A1-204ENST00000486023 POTEB2H3BUK9 544 aa20.72■□□□□ 0.91
COL6A1-204ENST00000486023 TRDNQ13061 729 aa20.72■□□□□ 0.91
COL6A1-204ENST00000486023 MUM1L1Q5H9M0 696 aa20.72■□□□□ 0.91
COL6A1-204ENST00000486023 NSMFQ6X4W1 530 aa20.72■□□□□ 0.91
COL6A1-204ENST00000486023 DGKHQ86XP1 1220 aa20.72■□□□□ 0.91
COL6A1-204ENST00000486023 ARRDC4Q8NCT1 418 aa20.72■□□□□ 0.91
COL6A1-204ENST00000486023 UBA5Q9GZZ9 404 aa20.72■□□□□ 0.91
COL6A1-204ENST00000486023 CPVLQ9H3G5 476 aa20.72■□□□□ 0.91
COL6A1-204ENST00000486023 CNNM2Q9H8M5 875 aa20.72■□□□□ 0.91
COL6A1-204ENST00000486023 PFASO15067 1338 aa20.72■□□□□ 0.91
COL6A1-204ENST00000486023 RAD50Q92878 1312 aa20.72■□□□□ 0.91
COL6A1-204ENST00000486023 SYN1P17600 705 aa20.71■□□□□ 0.91
COL6A1-204ENST00000486023 CNTN2Q02246 1040 aa20.71■□□□□ 0.91
COL6A1-204ENST00000486023 ZNF543Q08ER8 600 aa20.71■□□□□ 0.91
COL6A1-204ENST00000486023 CCDC178Q5BJE1 867 aa20.71■□□□□ 0.91
COL6A1-204ENST00000486023 CENPQQ7L2Z9 268 aaPredicted RBP20.71■□□□□ 0.91
COL6A1-204ENST00000486023 PNMA1Q8ND90 353 aa20.71■□□□□ 0.91
COL6A1-204ENST00000486023 PCDH10Q9P2E7 1040 aa20.71■□□□□ 0.91
COL6A1-204ENST00000486023 TNKSO95271 1327 aa20.71■□□□□ 0.91
COL6A1-204ENST00000486023 CEP290O15078 2479 aa20.7■□□□□ 0.9
COL6A1-204ENST00000486023 DNAJC25-GNG10A0A024R161 153 aa20.7■□□□□ 0.9
COL6A1-204ENST00000486023 KBTBD13C9JR72 458 aa20.7■□□□□ 0.9
COL6A1-204ENST00000486023 SGSM2O43147 1006 aa20.7■□□□□ 0.9
COL6A1-204ENST00000486023 SNAI1O95863 264 aaPredicted RBP20.7■□□□□ 0.9
COL6A1-204ENST00000486023 RARBP10826 455 aa20.7■□□□□ 0.9
COL6A1-204ENST00000486023 TKFCQ3LXA3 575 aa20.7■□□□□ 0.9
COL6A1-204ENST00000486023 HABP4Q5JVS0 413 aaKnown RBP20.7■□□□□ 0.9
COL6A1-204ENST00000486023 KIAA1211Q6ZU35 1233 aa20.7■□□□□ 0.9
COL6A1-204ENST00000486023 FERMT2Q96AC1 680 aa20.7■□□□□ 0.9
COL6A1-204ENST00000486023 LENG1Q96BZ8 264 aaPredicted RBP20.7■□□□□ 0.9
COL6A1-204ENST00000486023 RANBP17Q9H2T7 1088 aaKnown RBP20.7■□□□□ 0.9
COL6A1-204ENST00000486023 A1CFQ9NQ94 594 aaKnown RBP20.7■□□□□ 0.9
COL6A1-204ENST00000486023 U3KPZ7 1027 aaPredicted RBP20.7■□□□□ 0.9
COL6A1-204ENST00000486023 DNM1LO00429 736 aa20.69■□□□□ 0.9
COL6A1-204ENST00000486023 DHX16O60231 1041 aaKnown RBP20.69■□□□□ 0.9
COL6A1-204ENST00000486023 ICAM1P05362 532 aa20.69■□□□□ 0.9
COL6A1-204ENST00000486023 ZNF865P0CJ78 1059 aaPredicted RBP20.69■□□□□ 0.9
COL6A1-204ENST00000486023 COL6A1P12109 1028 aa20.69■□□□□ 0.9
COL6A1-204ENST00000486023 LRRC26Q2I0M4 334 aa20.69■□□□□ 0.9
COL6A1-204ENST00000486023 BTNL9Q6UXG8 535 aa20.69■□□□□ 0.9
COL6A1-204ENST00000486023 CYB5R4Q7L1T6 521 aa20.69■□□□□ 0.9
COL6A1-204ENST00000486023 ENAHQ8N8S7 591 aaPredicted RBP20.69■□□□□ 0.9
COL6A1-204ENST00000486023 CCDC136Q96JN2 1154 aa20.69■□□□□ 0.9
COL6A1-204ENST00000486023 VAT1LQ9HCJ6 419 aa20.69■□□□□ 0.9
COL6A1-204ENST00000486023 XPNPEP3Q9NQH7 507 aa20.69■□□□□ 0.9
COL6A1-204ENST00000486023 ZNF236Q9UL36 1845 aa20.69■□□□□ 0.9
COL6A1-204ENST00000486023 PGK1P00558 417 aa20.68■□□□□ 0.9
COL6A1-204ENST00000486023 CYP21A2P08686 494 aa20.68■□□□□ 0.9
COL6A1-204ENST00000486023 IFIT1BQ5T764 474 aaKnown RBP20.68■□□□□ 0.9
COL6A1-204ENST00000486023 CHST3Q7LGC8 479 aa20.68■□□□□ 0.9
COL6A1-204ENST00000486023 CCDC144CPQ8IYA2 1237 aa20.68■□□□□ 0.9
COL6A1-204ENST00000486023 PURBQ96QR8 312 aaKnown RBP20.68■□□□□ 0.9
COL6A1-204ENST00000486023 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.68■□□□□ 0.9
COL6A1-204ENST00000486023 NRBP1Q9UHY1 535 aa20.68■□□□□ 0.9
COL6A1-204ENST00000486023 DDX49Q9Y6V7 483 aaKnown RBP20.68■□□□□ 0.9
COL6A1-204ENST00000486023 PTPDC1A2A3K4 754 aa20.67■□□□□ 0.9
COL6A1-204ENST00000486023 AKR1A1P14550 325 aa20.67■□□□□ 0.9
COL6A1-204ENST00000486023 ADCYAP1R1P41586 468 aa20.67■□□□□ 0.9
COL6A1-204ENST00000486023 ACVR2BQ13705 512 aa20.67■□□□□ 0.9
COL6A1-204ENST00000486023 USH1GQ495M9 461 aa20.67■□□□□ 0.9
COL6A1-204ENST00000486023 ARMCX2Q7L311 632 aa20.67■□□□□ 0.9
COL6A1-204ENST00000486023 RALYLQ86SE5 291 aaKnown RBP20.67■□□□□ 0.9
COL6A1-204ENST00000486023 MSL3Q8N5Y2 521 aaKnown RBP20.67■□□□□ 0.9
COL6A1-204ENST00000486023 FAM184BQ9ULE4 1060 aa20.67■□□□□ 0.9
COL6A1-204ENST00000486023 TAF6LQ9Y6J9 622 aa20.67■□□□□ 0.9
COL6A1-204ENST00000486023 SYNGAP1Q96PV0 1343 aa20.67■□□□□ 0.9
COL6A1-204ENST00000486023 SOWAHBA6NEL2 793 aa20.66■□□□□ 0.9
COL6A1-204ENST00000486023 SNHG28P0DPA3 235 aa20.66■□□□□ 0.9
COL6A1-204ENST00000486023 BAATQ14032 418 aaPredicted RBP20.66■□□□□ 0.9
COL6A1-204ENST00000486023 LRRC41Q15345 812 aa20.66■□□□□ 0.9
COL6A1-204ENST00000486023 GPATCH4Q5T3I0 446 aaKnown RBP20.66■□□□□ 0.9
COL6A1-204ENST00000486023 MAMDC4Q6UXC1 1216 aa20.66■□□□□ 0.9
COL6A1-204ENST00000486023 NOL8Q76FK4 1167 aaKnown RBP20.66■□□□□ 0.9
COL6A1-204ENST00000486023 EEPD1Q7L9B9 569 aa20.66■□□□□ 0.9
COL6A1-204ENST00000486023 ZNF467Q7Z7K2 595 aaPredicted RBP20.66■□□□□ 0.9
COL6A1-204ENST00000486023 FAM133AQ8N9E0 248 aa20.66■□□□□ 0.9
COL6A1-204ENST00000486023 FGD4Q96M96 766 aa20.66■□□□□ 0.9
COL6A1-204ENST00000486023 RBM27Q9P2N5 1060 aaKnown RBP20.66■□□□□ 0.9
COL6A1-204ENST00000486023 RBM8AQ9Y5S9 174 aaKnown RBP20.66■□□□□ 0.9
COL6A1-204ENST00000486023 ZNFX1Q9P2E3 1918 aaKnown RBP20.65■□□□□ 0.9
COL6A1-204ENST00000486023 E7EWF7 191 aa20.65■□□□□ 0.9
COL6A1-204ENST00000486023 NFIBO00712 420 aa20.65■□□□□ 0.9
COL6A1-204ENST00000486023 IFIT3O14879 490 aaKnown RBP20.65■□□□□ 0.9
COL6A1-204ENST00000486023 PARP1P09874 1014 aaKnown RBP20.65■□□□□ 0.9
COL6A1-204ENST00000486023 CALML3P27482 149 aa20.65■□□□□ 0.9
COL6A1-204ENST00000486023 NT5C2P49902 561 aa20.65■□□□□ 0.9
COL6A1-204ENST00000486023 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.65■□□□□ 0.9
COL6A1-204ENST00000486023 RNF180Q86T96 592 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms