RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 NPC1L1Q9UHC9 1359 aa4.94□□□□□ -1.62
PRPF38B-205ENST00000485810 PRR33A8MZF0 331 aa4.94□□□□□ -1.62
PRPF38B-205ENST00000485810 PRRG2O14669 202 aa4.94□□□□□ -1.62
PRPF38B-205ENST00000485810 GIPC1O14908 333 aa4.94□□□□□ -1.62
PRPF38B-205ENST00000485810 S100BP04271 92 aaPredicted RBP4.94□□□□□ -1.62
PRPF38B-205ENST00000485810 GLI1P08151 1106 aa4.94□□□□□ -1.62
PRPF38B-205ENST00000485810 BDNFP23560 247 aa4.94□□□□□ -1.62
PRPF38B-205ENST00000485810 AFMP43652 599 aa4.94□□□□□ -1.62
PRPF38B-205ENST00000485810 HNRNPMP52272 730 aaKnown RBP eCLIP4.94□□□□□ -1.62
PRPF38B-205ENST00000485810 LMOD3Q0VAK6 560 aa4.94□□□□□ -1.62
PRPF38B-205ENST00000485810 MAP3K11Q16584 847 aa4.94□□□□□ -1.62
PRPF38B-205ENST00000485810 TSNAXIP1Q2TAA8 658 aa4.94□□□□□ -1.62
PRPF38B-205ENST00000485810 ZKSCAN2Q63HK3 967 aa4.94□□□□□ -1.62
PRPF38B-205ENST00000485810 SIAH1Q8IUQ4 282 aa4.94□□□□□ -1.62
PRPF38B-205ENST00000485810 PDILTQ8N807 584 aa4.94□□□□□ -1.62
PRPF38B-205ENST00000485810 FAM161BQ96MY7 647 aa4.94□□□□□ -1.62
PRPF38B-205ENST00000485810 TESK2Q96S53 571 aa4.94□□□□□ -1.62
PRPF38B-205ENST00000485810 TSPAN18Q96SJ8 248 aa4.94□□□□□ -1.62
PRPF38B-205ENST00000485810 GTF2IRD1Q9UHL9 959 aa4.94□□□□□ -1.62
PRPF38B-205ENST00000485810 TCEAL9Q9UHQ7 104 aa4.94□□□□□ -1.62
PRPF38B-205ENST00000485810 PPM1HQ9ULR3 514 aa4.94□□□□□ -1.62
PRPF38B-205ENST00000485810 SYCP2Q9BX26 1530 aa4.94□□□□□ -1.62
PRPF38B-205ENST00000485810 WDR7Q9Y4E6 1490 aa4.94□□□□□ -1.62
PRPF38B-205ENST00000485810 NCANO14594 1321 aa4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 PRAMEF27A3QJZ7 478 aa4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 B8ZZF3 427 aa4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 PRC1O43663 620 aa4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 TRIM37O94972 964 aa4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 RECKO95980 971 aa4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 ZSCAN22P10073 491 aaPredicted RBP4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 EIF4BP23588 611 aaKnown RBP4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 POLD1P28340 1107 aa4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 GNA15P30679 374 aa4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 GTF2F1P35269 517 aaKnown RBP eCLIP4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 RRP1P56182 461 aaKnown RBP4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 POU5F1Q01860 360 aaKnown RBP4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 TAGLNQ01995 201 aaKnown RBP4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 SAFB2Q14151 953 aaKnown RBP eCLIP4.93□□□□□ -1.624e-14■□□□□ 8.1
PRPF38B-205ENST00000485810 CCDC96Q2M329 555 aa4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 PLEKHG6Q3KR16 790 aa4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 EAPPQ56P03 285 aaPredicted RBP4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 MEI1Q5TIA1 1274 aa4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 LRFN4Q6PJG9 635 aa4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 TTLL10Q6ZVT0 673 aa4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 HSPA12BQ96MM6 686 aa4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 CARS2Q9HA77 564 aaKnown RBP4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 SPC25Q9HBM1 224 aa4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 ATP13A1Q9HD20 1204 aa4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 GEMIN8Q9NWZ8 242 aaKnown RBP4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 FEZ2Q9UHY8 353 aaPredicted RBP4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 TPX2Q9ULW0 747 aaKnown RBP4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 G3BP2Q9UN86 482 aaKnown RBP4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 TBX22Q9Y458 520 aa4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 SAMM50Q9Y512 469 aa4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 PCDHB5Q9Y5E4 795 aa4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 COL4A3BPQ9Y5P4 624 aa4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 TTC37Q6PGP7 1564 aa4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 MYO5CQ9NQX4 1742 aa4.93□□□□□ -1.62
PRPF38B-205ENST00000485810 VWDEQ8N2E2 1590 aa4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 CCDC189A1A4V9 331 aa4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 TCERG1O14776 1098 aaKnown RBP4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 PRPF40AO75400 957 aaKnown RBP4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 SLITRK5O94991 958 aa4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 CLCN7P51798 805 aa4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 TBX4P57082 545 aa4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 LRRC14Q15048 493 aa4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 ZBTB37Q5TC79 503 aa4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 TTBK2Q6IQ55 1244 aa4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 ARMCX6Q7L4S7 300 aa4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 CYFIP1Q7L576 1253 aa4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 PCGF5Q86SE9 256 aa4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 ANKLE2Q86XL3 938 aa4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 CREBRFQ8IUR6 639 aa4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 DHX38Q92620 1227 aaKnown RBP4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 ELMO3Q96BJ8 720 aa4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 PLPPR2Q96GM1 343 aa4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 KIRREL1Q96J84 757 aa4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 IRF2BPLQ9H1B7 796 aa4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 RAPGEFL1Q9UHV5 662 aa4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 CYP8B1Q9UNU6 501 aa4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 AK5Q9Y6K8 562 aa4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 TRPM2O94759 1503 aa4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 ABCC1P33527 1531 aa4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 ARHGAP5Q13017 1502 aa4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 CLASP1Q7Z460 1538 aa4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 DEPDC5O75140 1603 aa4.92□□□□□ -1.62
PRPF38B-205ENST00000485810 F6X3S4 739 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 DHX16O60231 1041 aaKnown RBP4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 MAN1A1P33908 653 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 BUD31P41223 144 aaPredicted RBP4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 TMF1P82094 1093 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 SEPT6Q14141 434 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 CCDC85BQ15834 202 aaPredicted RBP4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 ICE2Q659A1 982 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 CDC37L1Q7L3B6 337 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 GET4Q7L5D6 327 aaPredicted RBP4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 AMIGO3Q86WK7 504 aa4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 MSL3Q8N5Y2 521 aaKnown RBP4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.91□□□□□ -1.62
PRPF38B-205ENST00000485810 GAL3ST3Q96A11 431 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms