RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 SGMS1Q86VZ5 419 aa20.77■□□□□ 0.92
SREBF1-213ENST00000485080 CPXCR1Q8N123 301 aa20.77■□□□□ 0.92
SREBF1-213ENST00000485080 CHMP4CQ96CF2 233 aa20.77■□□□□ 0.92
SREBF1-213ENST00000485080 SNX14Q9Y5W7 946 aa20.77■□□□□ 0.92
SREBF1-213ENST00000485080 GRM4Q14833 912 aa20.76■□□□□ 0.91
SREBF1-213ENST00000485080 ADCK5Q3MIX3 580 aa20.76■□□□□ 0.91
SREBF1-213ENST00000485080 MAP3K21Q5TCX8 1036 aa20.76■□□□□ 0.91
SREBF1-213ENST00000485080 CATIPQ7Z7H3 387 aa20.76■□□□□ 0.91
SREBF1-213ENST00000485080 MMP19Q99542 508 aa20.76■□□□□ 0.91
SREBF1-213ENST00000485080 SLC5A4Q9NY91 659 aa20.76■□□□□ 0.91
SREBF1-213ENST00000485080 MAD2L2Q9UI95 211 aa20.76■□□□□ 0.91
SREBF1-213ENST00000485080 DIS3Q9Y2L1 958 aaKnown RBP20.76■□□□□ 0.91
SREBF1-213ENST00000485080 ZNFX1Q9P2E3 1918 aaKnown RBP20.76■□□□□ 0.91
SREBF1-213ENST00000485080 DDAH1O94760 285 aa20.75■□□□□ 0.91
SREBF1-213ENST00000485080 INHAP05111 366 aa20.75■□□□□ 0.91
SREBF1-213ENST00000485080 GOLGA8HP0CJ92 632 aa20.75■□□□□ 0.91
SREBF1-213ENST00000485080 KCTD2Q14681 263 aa20.75■□□□□ 0.91
SREBF1-213ENST00000485080 OLFML2BQ68BL8 750 aa20.75■□□□□ 0.91
SREBF1-213ENST00000485080 FBXL16Q8N461 479 aa20.75■□□□□ 0.91
SREBF1-213ENST00000485080 TRIB2Q92519 343 aa20.75■□□□□ 0.91
SREBF1-213ENST00000485080 AGBL1Q96MI9 1066 aa20.75■□□□□ 0.91
SREBF1-213ENST00000485080 DNAJC25-GNG10A0A024R161 153 aa20.74■□□□□ 0.91
SREBF1-213ENST00000485080 COBLO75128 1261 aa20.74■□□□□ 0.91
SREBF1-213ENST00000485080 CAPN2P17655 700 aa20.74■□□□□ 0.91
SREBF1-213ENST00000485080 DPP9Q86TI2 863 aa20.74■□□□□ 0.91
SREBF1-213ENST00000485080 MTMR8Q96EF0 704 aa20.74■□□□□ 0.91
SREBF1-213ENST00000485080 GPHNQ9NQX3 736 aaPredicted RBP20.74■□□□□ 0.91
SREBF1-213ENST00000485080 RBBP6Q7Z6E9 1792 aaKnown RBP20.73■□□□□ 0.91
SREBF1-213ENST00000485080 KLRF2D3W0D1 207 aa20.73■□□□□ 0.91
SREBF1-213ENST00000485080 SMARCA1P28370 1054 aa20.73■□□□□ 0.91
SREBF1-213ENST00000485080 ZNF792Q3KQV3 632 aa20.73■□□□□ 0.91
SREBF1-213ENST00000485080 CCDC174Q6PII3 467 aa20.73■□□□□ 0.91
SREBF1-213ENST00000485080 ADGRF4Q8IZF3 695 aa20.73■□□□□ 0.91
SREBF1-213ENST00000485080 ZNF654Q8IZM8 581 aa20.73■□□□□ 0.91
SREBF1-213ENST00000485080 STAG2Q8N3U4 1231 aa20.73■□□□□ 0.91
SREBF1-213ENST00000485080 NPLOC4Q8TAT6 608 aa20.73■□□□□ 0.91
SREBF1-213ENST00000485080 UBA5Q9GZZ9 404 aa20.73■□□□□ 0.91
SREBF1-213ENST00000485080 MAF1Q9H063 256 aa20.73■□□□□ 0.91
SREBF1-213ENST00000485080 ACAD9Q9H845 621 aa20.73■□□□□ 0.91
SREBF1-213ENST00000485080 BIN2Q9UBW5 565 aaPredicted RBP20.73■□□□□ 0.91
SREBF1-213ENST00000485080 CCPG1Q9ULG6 757 aa20.73■□□□□ 0.91
SREBF1-213ENST00000485080 SMCHD1A6NHR9 2005 aa20.72■□□□□ 0.91
SREBF1-213ENST00000485080 CALM1P0DP23 149 aa20.72■□□□□ 0.91
SREBF1-213ENST00000485080 CALM2P0DP24 149 aa20.72■□□□□ 0.91
SREBF1-213ENST00000485080 CALM3P0DP25 149 aa20.72■□□□□ 0.91
SREBF1-213ENST00000485080 PSMA5P28066 241 aa20.72■□□□□ 0.91
SREBF1-213ENST00000485080 RGS19P49795 217 aa20.72■□□□□ 0.91
SREBF1-213ENST00000485080 MTFR1Q15390 333 aa20.72■□□□□ 0.91
SREBF1-213ENST00000485080 TRERF1Q96PN7 1200 aa20.72■□□□□ 0.91
SREBF1-213ENST00000485080 TMEM106CQ9BVX2 250 aa20.72■□□□□ 0.91
SREBF1-213ENST00000485080 TM6SF1Q9BZW5 370 aa20.72■□□□□ 0.91
SREBF1-213ENST00000485080 RIOX1Q9H6W3 641 aa20.72■□□□□ 0.91
SREBF1-213ENST00000485080 JMJD4Q9H9V9 463 aa20.72■□□□□ 0.91
SREBF1-213ENST00000485080 RNF146Q9NTX7 359 aa20.72■□□□□ 0.91
SREBF1-213ENST00000485080 CCDC69A6NI79 296 aa20.71■□□□□ 0.91
SREBF1-213ENST00000485080 GJB1P08034 283 aa20.71■□□□□ 0.91
SREBF1-213ENST00000485080 CCL5P13501 91 aa20.71■□□□□ 0.91
SREBF1-213ENST00000485080 KIF5BP33176 963 aa20.71■□□□□ 0.91
SREBF1-213ENST00000485080 RCAN1P53805 252 aa20.71■□□□□ 0.91
SREBF1-213ENST00000485080 SNAP25P60880 206 aa20.71■□□□□ 0.91
SREBF1-213ENST00000485080 CCL14Q16627 93 aa20.71■□□□□ 0.91
SREBF1-213ENST00000485080 BLOC1S2Q6QNY1 142 aa20.71■□□□□ 0.91
SREBF1-213ENST00000485080 ZNF467Q7Z7K2 595 aaPredicted RBP20.71■□□□□ 0.91
SREBF1-213ENST00000485080 MSL3Q8N5Y2 521 aaKnown RBP20.71■□□□□ 0.91
SREBF1-213ENST00000485080 IL17RAQ96F46 866 aa20.71■□□□□ 0.91
SREBF1-213ENST00000485080 MAML3Q96JK9 1138 aa20.71■□□□□ 0.91
SREBF1-213ENST00000485080 JAKMIP1Q96N16 626 aaKnown RBP20.71■□□□□ 0.91
SREBF1-213ENST00000485080 LZTS2Q9BRK4 669 aa20.71■□□□□ 0.91
SREBF1-213ENST00000485080 PAK6Q9NQU5 681 aaPredicted RBP20.71■□□□□ 0.91
SREBF1-213ENST00000485080 FLRT1Q9NZU1 646 aa20.71■□□□□ 0.91
SREBF1-213ENST00000485080 RPTORQ8N122 1335 aa20.71■□□□□ 0.91
SREBF1-213ENST00000485080 MKI67P46013 3256 aaKnown RBP20.71■□□□□ 0.91
SREBF1-213ENST00000485080 ALAS1P13196 640 aa20.7■□□□□ 0.9
SREBF1-213ENST00000485080 GNAQP50148 359 aa20.7■□□□□ 0.9
SREBF1-213ENST00000485080 ANAPC15P60006 121 aa20.7■□□□□ 0.9
SREBF1-213ENST00000485080 MFSD14CQ5VZR4 134 aa20.7■□□□□ 0.9
SREBF1-213ENST00000485080 NFXL1Q6ZNB6 911 aa20.7■□□□□ 0.9
SREBF1-213ENST00000485080 ANKRD35Q8N283 1001 aa20.7■□□□□ 0.9
SREBF1-213ENST00000485080 RGS22Q8NE09 1264 aa20.7■□□□□ 0.9
SREBF1-213ENST00000485080 LRRC2Q9BYS8 371 aa20.7■□□□□ 0.9
SREBF1-213ENST00000485080 AGXT2Q9BYV1 514 aa20.7■□□□□ 0.9
SREBF1-213ENST00000485080 CPVLQ9H3G5 476 aa20.7■□□□□ 0.9
SREBF1-213ENST00000485080 SLC12A7Q9Y666 1083 aa20.7■□□□□ 0.9
SREBF1-213ENST00000485080 PFASO15067 1338 aa20.7■□□□□ 0.9
SREBF1-213ENST00000485080 BAZ2BQ9UIF8 2168 aaKnown RBP20.69■□□□□ 0.9
SREBF1-213ENST00000485080 RPS6KB1P23443 525 aa20.69■□□□□ 0.9
SREBF1-213ENST00000485080 CACNB2Q08289 660 aaPredicted RBP20.69■□□□□ 0.9
SREBF1-213ENST00000485080 CDC37Q16543 378 aaPredicted RBP20.69■□□□□ 0.9
SREBF1-213ENST00000485080 SLC35G1Q2M3R5 365 aa20.69■□□□□ 0.9
SREBF1-213ENST00000485080 CTCFLQ8NI51 663 aaPredicted RBP20.69■□□□□ 0.9
SREBF1-213ENST00000485080 DDX11Q96FC9 970 aa20.69■□□□□ 0.9
SREBF1-213ENST00000485080 SPZ1Q9BXG8 430 aa20.69■□□□□ 0.9
SREBF1-213ENST00000485080 RNF208Q9H0X6 261 aa20.69■□□□□ 0.9
SREBF1-213ENST00000485080 UNC93B1Q9H1C4 597 aa20.69■□□□□ 0.9
SREBF1-213ENST00000485080 ZSWIM6Q9HCJ5 1215 aa20.69■□□□□ 0.9
SREBF1-213ENST00000485080 A1CFQ9NQ94 594 aaKnown RBP20.69■□□□□ 0.9
SREBF1-213ENST00000485080 NRBP1Q9UHY1 535 aa20.69■□□□□ 0.9
SREBF1-213ENST00000485080 PGK2P07205 417 aa20.68■□□□□ 0.9
SREBF1-213ENST00000485080 PRKAR2AP13861 404 aaKnown RBP20.68■□□□□ 0.9
SREBF1-213ENST00000485080 SLC4A3P48751 1232 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms