RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 DDX20Q9UHI6 824 aaKnown RBP14.43□□□□□ -0.1
MSH5-216ENST00000484309 BAZ2BQ9UIF8 2168 aaKnown RBP14.43□□□□□ -0.1
MSH5-216ENST00000484309 PLA2G6O60733 806 aa14.42□□□□□ -0.1
MSH5-216ENST00000484309 NEFLP07196 543 aa14.42□□□□□ -0.1
MSH5-216ENST00000484309 FDX1P10109 184 aa14.42□□□□□ -0.1
MSH5-216ENST00000484309 ZNF543Q08ER8 600 aa14.42□□□□□ -0.1
MSH5-216ENST00000484309 SYDE2Q5VT97 1194 aa14.42□□□□□ -0.1
MSH5-216ENST00000484309 NECAB2Q7Z6G3 386 aa14.42□□□□□ -0.1
MSH5-216ENST00000484309 ENAHQ8N8S7 591 aaPredicted RBP14.42□□□□□ -0.1
MSH5-216ENST00000484309 ANKLE1Q8NAG6 615 aa14.42□□□□□ -0.1
MSH5-216ENST00000484309 PNMA1Q8ND90 353 aa14.42□□□□□ -0.1
MSH5-216ENST00000484309 TRERF1Q96PN7 1200 aa14.42□□□□□ -0.1
MSH5-216ENST00000484309 TINF2Q9BSI4 451 aa14.42□□□□□ -0.1
MSH5-216ENST00000484309 HTATIP2Q9BUP3 242 aa14.42□□□□□ -0.1
MSH5-216ENST00000484309 KAT14Q9H8E8 782 aa14.42□□□□□ -0.1
MSH5-216ENST00000484309 CNNM2Q9H8M5 875 aa14.42□□□□□ -0.1
MSH5-216ENST00000484309 CCPG1Q9ULG6 757 aa14.42□□□□□ -0.1
MSH5-216ENST00000484309 RBM8AQ9Y5S9 174 aaKnown RBP14.42□□□□□ -0.1
MSH5-216ENST00000484309 U3KPZ7 1027 aaPredicted RBP14.42□□□□□ -0.1
MSH5-216ENST00000484309 MYCNP04198 464 aaPredicted RBP14.41□□□□□ -0.1
MSH5-216ENST00000484309 MUM1L1Q5H9M0 696 aa14.41□□□□□ -0.1
MSH5-216ENST00000484309 STOX1Q6ZVD7 989 aa14.41□□□□□ -0.1
MSH5-216ENST00000484309 DGKHQ86XP1 1220 aa14.41□□□□□ -0.1
MSH5-216ENST00000484309 CHST13Q8NET6 341 aa14.41□□□□□ -0.1
MSH5-216ENST00000484309 ESYT1Q9BSJ8 1104 aa14.41□□□□□ -0.1
MSH5-216ENST00000484309 UBAC1Q9BSL1 405 aa14.41□□□□□ -0.1
MSH5-216ENST00000484309 RANBP17Q9H2T7 1088 aaKnown RBP14.41□□□□□ -0.1
MSH5-216ENST00000484309 C11orf49Q9H6J7 331 aa14.41□□□□□ -0.1
MSH5-216ENST00000484309 ACAD9Q9H845 621 aa14.41□□□□□ -0.1
MSH5-216ENST00000484309 FBXO40Q9UH90 709 aa14.41□□□□□ -0.1
MSH5-216ENST00000484309 DNAJC25-GNG10A0A024R161 153 aa14.4□□□□□ -0.1
MSH5-216ENST00000484309 E7EWF7 191 aa14.4□□□□□ -0.1
MSH5-216ENST00000484309 H0YGN5 161 aa14.4□□□□□ -0.1
MSH5-216ENST00000484309 SNHG28P0DPA3 235 aa14.4□□□□□ -0.1
MSH5-216ENST00000484309 CNTN2Q02246 1040 aa14.4□□□□□ -0.1
MSH5-216ENST00000484309 TRDNQ13061 729 aa14.4□□□□□ -0.1
MSH5-216ENST00000484309 CCDC178Q5BJE1 867 aa14.4□□□□□ -0.1
MSH5-216ENST00000484309 BMP2KLQ5H9B9 411 aa14.4□□□□□ -0.1
MSH5-216ENST00000484309 BTNL9Q6UXG8 535 aa14.4□□□□□ -0.1
MSH5-216ENST00000484309 KIAA1211Q6ZU35 1233 aa14.4□□□□□ -0.1
MSH5-216ENST00000484309 CHST3Q7LGC8 479 aa14.4□□□□□ -0.1
MSH5-216ENST00000484309 MAP4K1Q92918 833 aa14.4□□□□□ -0.1
MSH5-216ENST00000484309 FGD4Q96M96 766 aa14.4□□□□□ -0.1
MSH5-216ENST00000484309 UBA5Q9GZZ9 404 aa14.4□□□□□ -0.1
MSH5-216ENST00000484309 A1CFQ9NQ94 594 aaKnown RBP14.4□□□□□ -0.1
MSH5-216ENST00000484309 DIS3Q9Y2L1 958 aaKnown RBP14.4□□□□□ -0.1
MSH5-216ENST00000484309 PFASO15067 1338 aa14.4□□□□□ -0.1
MSH5-216ENST00000484309 ICAM1P05362 532 aa14.39□□□□□ -0.11
MSH5-216ENST00000484309 CAPN2P17655 700 aa14.39□□□□□ -0.11
MSH5-216ENST00000484309 IFIT1BQ5T764 474 aaKnown RBP14.39□□□□□ -0.11
MSH5-216ENST00000484309 NSMFQ6X4W1 530 aa14.39□□□□□ -0.11
MSH5-216ENST00000484309 RALYLQ86SE5 291 aaKnown RBP14.39□□□□□ -0.11
MSH5-216ENST00000484309 LENG1Q96BZ8 264 aaPredicted RBP14.39□□□□□ -0.11
MSH5-216ENST00000484309 LSG1Q9H089 658 aaKnown RBP14.39□□□□□ -0.11
MSH5-216ENST00000484309 ANO2Q9NQ90 1003 aa14.39□□□□□ -0.11
MSH5-216ENST00000484309 DDX49Q9Y6V7 483 aaKnown RBP14.39□□□□□ -0.11
MSH5-216ENST00000484309 POTEB2H3BUK9 544 aa14.38□□□□□ -0.11
MSH5-216ENST00000484309 SEPT4O43236 478 aa14.38□□□□□ -0.11
MSH5-216ENST00000484309 EVI5O60447 810 aa14.38□□□□□ -0.11
MSH5-216ENST00000484309 MSCO60682 206 aa14.38□□□□□ -0.11
MSH5-216ENST00000484309 NT5C2P49902 561 aa14.38□□□□□ -0.11
MSH5-216ENST00000484309 SEC23AQ15436 765 aa14.38□□□□□ -0.11
MSH5-216ENST00000484309 TKFCQ3LXA3 575 aa14.38□□□□□ -0.11
MSH5-216ENST00000484309 GJC2Q5T442 439 aaPredicted RBP14.38□□□□□ -0.11
MSH5-216ENST00000484309 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.38□□□□□ -0.11
MSH5-216ENST00000484309 POTEDQ86YR6 584 aa14.38□□□□□ -0.11
MSH5-216ENST00000484309 C7orf61Q8IZ16 206 aa14.38□□□□□ -0.11
MSH5-216ENST00000484309 NCOA7Q8NI08 942 aa14.38□□□□□ -0.11
MSH5-216ENST00000484309 ANKS1AQ92625 1134 aa14.38□□□□□ -0.11
MSH5-216ENST00000484309 PURBQ96QR8 312 aaKnown RBP14.38□□□□□ -0.11
MSH5-216ENST00000484309 SENP2Q9HC62 589 aa14.38□□□□□ -0.11
MSH5-216ENST00000484309 PCDH10Q9P2E7 1040 aa14.38□□□□□ -0.11
MSH5-216ENST00000484309 ZHX1Q9UKY1 873 aaPredicted RBP14.38□□□□□ -0.11
MSH5-216ENST00000484309 CNPY2Q9Y2B0 182 aa14.38□□□□□ -0.11
MSH5-216ENST00000484309 NFIBO00712 420 aa14.37□□□□□ -0.11
MSH5-216ENST00000484309 IFIT3O14879 490 aaKnown RBP14.37□□□□□ -0.11
MSH5-216ENST00000484309 DHX16O60231 1041 aaKnown RBP14.37□□□□□ -0.11
MSH5-216ENST00000484309 SNAI1O95863 264 aaPredicted RBP14.37□□□□□ -0.11
MSH5-216ENST00000484309 ZNF865P0CJ78 1059 aaPredicted RBP14.37□□□□□ -0.11
MSH5-216ENST00000484309 USH1GQ495M9 461 aa14.37□□□□□ -0.11
MSH5-216ENST00000484309 GPATCH4Q5T3I0 446 aaKnown RBP14.37□□□□□ -0.11
MSH5-216ENST00000484309 FAM133AQ8N9E0 248 aa14.37□□□□□ -0.11
MSH5-216ENST00000484309 SOWAHBA6NEL2 793 aa14.36□□□□□ -0.11
MSH5-216ENST00000484309 PARP1P09874 1014 aaKnown RBP14.36□□□□□ -0.11
MSH5-216ENST00000484309 COL6A1P12109 1028 aa14.36□□□□□ -0.11
MSH5-216ENST00000484309 ANTXR2P58335 489 aa14.36□□□□□ -0.11
MSH5-216ENST00000484309 CDC37Q16543 378 aaPredicted RBP14.36□□□□□ -0.11
MSH5-216ENST00000484309 ASPRV1Q53RT3 343 aa14.36□□□□□ -0.11
MSH5-216ENST00000484309 ARMCX2Q7L311 632 aa14.36□□□□□ -0.11
MSH5-216ENST00000484309 CCDC144CPQ8IYA2 1237 aa14.36□□□□□ -0.11
MSH5-216ENST00000484309 STAG2Q8N3U4 1231 aa14.36□□□□□ -0.11
MSH5-216ENST00000484309 SENP6Q9GZR1 1112 aaPredicted RBP14.36□□□□□ -0.11
MSH5-216ENST00000484309 VAT1LQ9HCJ6 419 aa14.36□□□□□ -0.11
MSH5-216ENST00000484309 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.36□□□□□ -0.11
MSH5-216ENST00000484309 CYP39A1Q9NYL5 469 aa14.36□□□□□ -0.11
MSH5-216ENST00000484309 ASTN1O14525 1302 aa14.36□□□□□ -0.11
MSH5-216ENST00000484309 SYNGAP1Q96PV0 1343 aa14.36□□□□□ -0.11
MSH5-216ENST00000484309 TRIOBPQ9H2D6 2365 aa14.36□□□□□ -0.11
MSH5-216ENST00000484309 PTPDC1A2A3K4 754 aa14.35□□□□□ -0.11
MSH5-216ENST00000484309 SLC27A2O14975 620 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms