RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 FAM47EQ6ZV65 393 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 GNAT1P11488 350 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 EHHADHQ08426 723 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 APLFQ8IW19 511 aaPredicted RBP11.18□□□□□ -0.62
COL12A1-207ENST00000483888 HIC2Q96JB3 615 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 ZBED2Q9BTP6 218 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 PAPOLBQ9NRJ5 636 aaKnown RBP11.18□□□□□ -0.62
COL12A1-207ENST00000483888 DLGAP2Q9P1A6 1054 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 TNNQ9UQP3 1299 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 USTQ9Y2C2 406 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 IQCA1LA6NCM1 817 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 CARSP49589 748 aaKnown RBP11.18□□□□□ -0.62
COL12A1-207ENST00000483888 PPM1FP49593 454 aaPredicted RBP11.18□□□□□ -0.62
COL12A1-207ENST00000483888 RSAD2Q8WXG1 361 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 DIABLOQ9NR28 239 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 AFG3L2Q9Y4W6 797 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 SNX14Q9Y5W7 946 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 PDE5AO76074 875 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 ZBTB40Q9NUA8 1239 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 GID8Q9NWU2 228 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 SOWAHDA6NJG2 315 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 FMO2Q99518 471 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 PITPNM3Q9BZ71 974 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 ASXL1Q8IXJ9 1541 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 ZFP69BQ9UJL9 534 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 ATP11BQ9Y2G3 1177 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 MYO1FO00160 1098 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 SCRN1Q12765 414 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 NFU1Q9UMS0 254 aa11.18□□□□□ -0.62
COL12A1-207ENST00000483888 SCG2P13521 617 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 PDE6CP51160 858 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 CHAMP1Q96JM3 812 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 EPN3Q9H201 632 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 SNRKQ9NRH2 765 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 DTNBO60941 627 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 KRT4P19013 534 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 ABCD1P33897 745 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 KAZNQ674X7 775 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 TRIM42Q8IWZ5 723 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 SYT2Q8N9I0 419 aaPredicted RBP11.17□□□□□ -0.62
COL12A1-207ENST00000483888 SPDYE1Q8NFV5 336 aaPredicted RBP11.17□□□□□ -0.62
COL12A1-207ENST00000483888 EHBP1L1Q8N3D4 1523 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 SLC5A1P13866 664 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 NAPAP54920 295 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 CAVIN4Q5BKX8 364 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 AKNAD1Q5T1N1 836 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 ADALQ6DHV7 355 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 CRACR2BQ8N4Y2 399 aaPredicted RBP11.17□□□□□ -0.62
COL12A1-207ENST00000483888 ANKRD2Q9GZV1 360 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 MBIPQ9NS73 344 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 PLCD1P51178 756 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 BIRC3Q13489 604 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 PLCB4Q15147 1175 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 NAA35Q5VZE5 725 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 CDK19Q9BWU1 502 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 NLRC4Q9NPP4 1024 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 SLC4A4Q9Y6R1 1079 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 SERPINB10P48595 397 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 IFIT5Q13325 482 aaKnown RBP11.17□□□□□ -0.62
COL12A1-207ENST00000483888 RASSF3Q86WH2 238 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 OMA1Q96E52 524 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 MAP3K2Q9Y2U5 619 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 CALUO43852 315 aaPredicted RBP11.17□□□□□ -0.62
COL12A1-207ENST00000483888 ETNK1Q9HBU6 452 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 TEKT2Q9UIF3 430 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 CAB39Q9Y376 341 aaPredicted RBP11.17□□□□□ -0.62
COL12A1-207ENST00000483888 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.17□□□□□ -0.62
COL12A1-207ENST00000483888 RTL9Q8NET4 1388 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 WDR91A4D1P6 747 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 ASPHQ12797 758 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 INAQ16352 499 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 RFWD2Q8NHY2 731 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 ING2Q9H160 280 aa11.17□□□□□ -0.62
COL12A1-207ENST00000483888 PTPN23Q9H3S7 1636 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 CCND1P24385 295 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 ADCY2Q08462 1091 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 CCDC80Q76M96 950 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 LSM14BQ9BX40 385 aaKnown RBP11.16□□□□□ -0.62
COL12A1-207ENST00000483888 ZMYND12Q9H0C1 365 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 EHD2Q9NZN4 543 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 RALGAPBQ86X10 1494 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 RASSF7Q02833 373 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 CLMNQ96JQ2 1002 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 SLC27A2O14975 620 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 CUL4BQ13620 913 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 MCF2L2Q86YR7 1114 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 CDC5LQ99459 802 aaKnown RBP11.16□□□□□ -0.62
COL12A1-207ENST00000483888 CABP1Q9NZU7 370 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 GABPB2Q8TAK5 448 aaPredicted RBP11.16□□□□□ -0.62
COL12A1-207ENST00000483888 ESR2Q92731 530 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 SCYL1Q96KG9 808 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 ABCB4P21439 1286 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 CASP14P31944 242 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 CNGA3Q16281 694 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 CEP85Q6P2H3 762 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 FAM170AA1A519 330 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 DEAF1O75398 565 aaPredicted RBP11.16□□□□□ -0.62
COL12A1-207ENST00000483888 NCF2P19878 526 aaPredicted RBP11.16□□□□□ -0.62
COL12A1-207ENST00000483888 RBL2Q08999 1139 aa11.16□□□□□ -0.62
COL12A1-207ENST00000483888 TCP11X2Q5H9J9 407 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms