RNA–Protein interactions for RNA: ENST00000483797.1

PNKD-207, Transcript of PNKD, MBL domain containing, humanhuman

TSL 3

Gene PNKD, Length 209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKD-207ENST00000483797 EFCC1Q9HA90 598 aa17.03■□□□□ 0.32
PNKD-207ENST00000483797 MORF4L1Q9UBU8 362 aa17.03■□□□□ 0.32
PNKD-207ENST00000483797 RABGAP1Q9Y3P9 1069 aa17.03■□□□□ 0.32
PNKD-207ENST00000483797 RIPK3Q9Y572 518 aa17.03■□□□□ 0.32
PNKD-207ENST00000483797 DHX16O60231 1041 aaKnown RBP17.02■□□□□ 0.32
PNKD-207ENST00000483797 CALM1P0DP23 149 aa17.02■□□□□ 0.32
PNKD-207ENST00000483797 CALM2P0DP24 149 aa17.02■□□□□ 0.32
PNKD-207ENST00000483797 CALM3P0DP25 149 aa17.02■□□□□ 0.32
PNKD-207ENST00000483797 GCLCP48506 637 aaPredicted RBP17.02■□□□□ 0.32
PNKD-207ENST00000483797 SCRN1Q12765 414 aa17.02■□□□□ 0.32
PNKD-207ENST00000483797 CDC37Q16543 378 aaPredicted RBP17.02■□□□□ 0.32
PNKD-207ENST00000483797 QRICH1Q2TAL8 776 aa17.02■□□□□ 0.32
PNKD-207ENST00000483797 HOMER1Q86YM7 354 aa17.02■□□□□ 0.32
PNKD-207ENST00000483797 CD99L2Q8TCZ2 262 aa17.02■□□□□ 0.32
PNKD-207ENST00000483797 ZNF274Q96GC6 653 aaPredicted RBP17.02■□□□□ 0.32
PNKD-207ENST00000483797 RIOX1Q9H6W3 641 aa17.02■□□□□ 0.32
PNKD-207ENST00000483797 PFKFB2O60825 505 aa17.01■□□□□ 0.31
PNKD-207ENST00000483797 KIF5BP33176 963 aa17.01■□□□□ 0.31
PNKD-207ENST00000483797 LBX1P52954 281 aa17.01■□□□□ 0.31
PNKD-207ENST00000483797 NTRK3Q16288 839 aa17.01■□□□□ 0.31
PNKD-207ENST00000483797 FAM110CQ1W6H9 321 aa17.01■□□□□ 0.31
PNKD-207ENST00000483797 GPRC5AQ8NFJ5 357 aa17.01■□□□□ 0.31
PNKD-207ENST00000483797 PHKBQ93100 1093 aa17.01■□□□□ 0.31
PNKD-207ENST00000483797 MTMR8Q96EF0 704 aa17.01■□□□□ 0.31
PNKD-207ENST00000483797 SPZ1Q9BXG8 430 aa17.01■□□□□ 0.31
PNKD-207ENST00000483797 SPATC1LQ9H0A9 340 aa17.01■□□□□ 0.31
PNKD-207ENST00000483797 HOMER2Q9NSB8 354 aa17.01■□□□□ 0.31
PNKD-207ENST00000483797 LCTP09848 1927 aa17■□□□□ 0.31
PNKD-207ENST00000483797 ZNFX1Q9P2E3 1918 aaKnown RBP17■□□□□ 0.31
PNKD-207ENST00000483797 ZBED4O75132 1171 aa17■□□□□ 0.31
PNKD-207ENST00000483797 CTDNEP1O95476 244 aa17■□□□□ 0.31
PNKD-207ENST00000483797 ANKRD1Q15327 319 aa17■□□□□ 0.31
PNKD-207ENST00000483797 SNRNP48Q6IEG0 339 aaKnown RBP17■□□□□ 0.31
PNKD-207ENST00000483797 STAT3P40763 770 aa16.99■□□□□ 0.31
PNKD-207ENST00000483797 RCAN1P53805 252 aa16.99■□□□□ 0.31
PNKD-207ENST00000483797 LACTBP83111 547 aaPredicted RBP16.99■□□□□ 0.31
PNKD-207ENST00000483797 SP3Q02447 781 aa16.99■□□□□ 0.31
PNKD-207ENST00000483797 USH1GQ495M9 461 aa16.99■□□□□ 0.31
PNKD-207ENST00000483797 MUM1L1Q5H9M0 696 aa16.99■□□□□ 0.31
PNKD-207ENST00000483797 MB21D1Q8N884 522 aa16.99■□□□□ 0.31
PNKD-207ENST00000483797 TRIM47Q96LD4 638 aa16.99■□□□□ 0.31
PNKD-207ENST00000483797 SLKQ9H2G2 1235 aaPredicted RBP16.99■□□□□ 0.31
PNKD-207ENST00000483797 RBM28Q9NW13 759 aaKnown RBP16.99■□□□□ 0.31
PNKD-207ENST00000483797 LIMCH1Q9UPQ0 1083 aa16.99■□□□□ 0.31
PNKD-207ENST00000483797 RBBP6Q7Z6E9 1792 aaKnown RBP16.98■□□□□ 0.31
PNKD-207ENST00000483797 FKTNO75072 461 aa16.98■□□□□ 0.31
PNKD-207ENST00000483797 ALAS1P13196 640 aa16.98■□□□□ 0.31
PNKD-207ENST00000483797 ERCC3P19447 782 aa16.98■□□□□ 0.31
PNKD-207ENST00000483797 WDR78Q5VTH9 848 aa16.98■□□□□ 0.31
PNKD-207ENST00000483797 CCDC83Q8IWF9 413 aa16.98■□□□□ 0.31
PNKD-207ENST00000483797 GTF3C2Q8WUA4 911 aaPredicted RBP16.98■□□□□ 0.31
PNKD-207ENST00000483797 GPKOWQ92917 476 aaPredicted RBP eCLIP16.98■□□□□ 0.31
PNKD-207ENST00000483797 GTF3C6Q969F1 213 aa16.98■□□□□ 0.31
PNKD-207ENST00000483797 COA7Q96BR5 231 aa16.98■□□□□ 0.31
PNKD-207ENST00000483797 TEX13BQ9BXU2 312 aa16.98■□□□□ 0.31
PNKD-207ENST00000483797 CCPG1Q9ULG6 757 aa16.98■□□□□ 0.31
PNKD-207ENST00000483797 CTDP1Q9Y5B0 961 aaPredicted RBP16.98■□□□□ 0.31
PNKD-207ENST00000483797 ST18O60284 1047 aa16.97■□□□□ 0.31
PNKD-207ENST00000483797 JAK2O60674 1132 aa16.97■□□□□ 0.31
PNKD-207ENST00000483797 ICAM1P05362 532 aa16.97■□□□□ 0.31
PNKD-207ENST00000483797 PSMC4P43686 418 aa16.97■□□□□ 0.31
PNKD-207ENST00000483797 GNAQP50148 359 aa16.97■□□□□ 0.31
PNKD-207ENST00000483797 NCAPG2Q86XI2 1143 aa16.97■□□□□ 0.31
PNKD-207ENST00000483797 RIOX2Q8IUF8 465 aa16.97■□□□□ 0.31
PNKD-207ENST00000483797 SHISA4Q96DD7 197 aa16.97■□□□□ 0.31
PNKD-207ENST00000483797 AIFM3Q96NN9 605 aa16.97■□□□□ 0.31
PNKD-207ENST00000483797 V9GY48 417 aaPredicted RBP16.97■□□□□ 0.31
PNKD-207ENST00000483797 NFIBO00712 420 aa16.96■□□□□ 0.31
PNKD-207ENST00000483797 OPLAHO14841 1288 aa16.96■□□□□ 0.31
PNKD-207ENST00000483797 ATP2A1O14983 1001 aa16.96■□□□□ 0.31
PNKD-207ENST00000483797 ZBTB5O15062 677 aa16.96■□□□□ 0.31
PNKD-207ENST00000483797 IFNAR1P17181 557 aa16.96■□□□□ 0.31
PNKD-207ENST00000483797 CTCFP49711 727 aaPredicted RBP16.96■□□□□ 0.31
PNKD-207ENST00000483797 TYW1BQ6NUM6 668 aa16.96■□□□□ 0.31
PNKD-207ENST00000483797 TBC1D5Q92609 795 aa16.96■□□□□ 0.31
PNKD-207ENST00000483797 TMX3Q96JJ7 454 aa16.96■□□□□ 0.31
PNKD-207ENST00000483797 LZTS2Q9BRK4 669 aa16.96■□□□□ 0.31
PNKD-207ENST00000483797 SLC26A6Q9BXS9 759 aa16.96■□□□□ 0.31
PNKD-207ENST00000483797 RNF146Q9NTX7 359 aa16.96■□□□□ 0.31
PNKD-207ENST00000483797 GABRQQ9UN88 632 aa16.96■□□□□ 0.31
PNKD-207ENST00000483797 PLXNA1Q9UIW2 1896 aa16.95■□□□□ 0.3
PNKD-207ENST00000483797 PNMA6FA0A0J9YX94 578 aa16.95■□□□□ 0.3
PNKD-207ENST00000483797 ADAMTS3O15072 1205 aa16.95■□□□□ 0.3
PNKD-207ENST00000483797 PKN1Q16512 942 aa16.95■□□□□ 0.3
PNKD-207ENST00000483797 WWC2Q6AWC2 1192 aa16.95■□□□□ 0.3
PNKD-207ENST00000483797 GPR142Q7Z601 462 aa16.95■□□□□ 0.3
PNKD-207ENST00000483797 FBXO11Q86XK2 927 aa16.95■□□□□ 0.3
PNKD-207ENST00000483797 NSUN7Q8NE18 718 aaKnown RBP16.95■□□□□ 0.3
PNKD-207ENST00000483797 CLEC4DQ8WXI8 215 aa16.95■□□□□ 0.3
PNKD-207ENST00000483797 RRP36Q96EU6 259 aaKnown RBP16.95■□□□□ 0.3
PNKD-207ENST00000483797 HTTP42858 3142 aa16.94■□□□□ 0.3
PNKD-207ENST00000483797 FMNL1O95466 1100 aaPredicted RBP16.94■□□□□ 0.3
PNKD-207ENST00000483797 FDX1P10109 184 aa16.94■□□□□ 0.3
PNKD-207ENST00000483797 SMARCA1P28370 1054 aa16.94■□□□□ 0.3
PNKD-207ENST00000483797 OAZ1P54368 228 aa16.94■□□□□ 0.3
PNKD-207ENST00000483797 NOM1Q5C9Z4 860 aaKnown RBP16.94■□□□□ 0.3
PNKD-207ENST00000483797 TRERF1Q96PN7 1200 aa16.94■□□□□ 0.3
PNKD-207ENST00000483797 PURBQ96QR8 312 aaKnown RBP16.94■□□□□ 0.3
PNKD-207ENST00000483797 GJB4Q9NTQ9 266 aa16.94■□□□□ 0.3
PNKD-207ENST00000483797 DDX49Q9Y6V7 483 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms