RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 ANKRD35Q8N283 1001 aa21.37■■□□□ 1.01
ATG4B-221ENST00000483778 HELLSQ9NRZ9 838 aa21.37■■□□□ 1.01
ATG4B-221ENST00000483778 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.37■■□□□ 1.01
ATG4B-221ENST00000483778 STX8Q9UNK0 236 aa21.37■■□□□ 1.01
ATG4B-221ENST00000483778 SYNRGQ9UMZ2 1314 aa21.36■■□□□ 1.01
ATG4B-221ENST00000483778 A0A1W2PQ45 241 aaPredicted RBP21.36■■□□□ 1.01
ATG4B-221ENST00000483778 A0A1W2PQY0 241 aa21.36■■□□□ 1.01
ATG4B-221ENST00000483778 FGRP09769 529 aa21.36■■□□□ 1.01
ATG4B-221ENST00000483778 SLC1A4P43007 532 aa21.36■■□□□ 1.01
ATG4B-221ENST00000483778 NMIQ13287 307 aaPredicted RBP21.36■■□□□ 1.01
ATG4B-221ENST00000483778 ACVR2BQ13705 512 aa21.36■■□□□ 1.01
ATG4B-221ENST00000483778 C1orf53Q5VUE5 145 aa21.36■■□□□ 1.01
ATG4B-221ENST00000483778 CCSAPQ6IQ19 270 aaPredicted RBP21.36■■□□□ 1.01
ATG4B-221ENST00000483778 TTBK2Q6IQ55 1244 aa21.36■■□□□ 1.01
ATG4B-221ENST00000483778 RCSD1Q6JBY9 416 aa21.36■■□□□ 1.01
ATG4B-221ENST00000483778 B4GALNT3Q6L9W6 998 aa21.36■■□□□ 1.01
ATG4B-221ENST00000483778 RNF180Q86T96 592 aa21.36■■□□□ 1.01
ATG4B-221ENST00000483778 MSL3Q8N5Y2 521 aaKnown RBP21.36■■□□□ 1.01
ATG4B-221ENST00000483778 KLHDC9Q8NEP7 349 aa21.36■■□□□ 1.01
ATG4B-221ENST00000483778 CHST13Q8NET6 341 aa21.36■■□□□ 1.01
ATG4B-221ENST00000483778 ZBTB47Q9UFB7 747 aaPredicted RBP21.36■■□□□ 1.01
ATG4B-221ENST00000483778 PRKAG2Q9UGJ0 569 aa21.36■■□□□ 1.01
ATG4B-221ENST00000483778 ZHX1Q9UKY1 873 aaPredicted RBP21.36■■□□□ 1.01
ATG4B-221ENST00000483778 FAM184BQ9ULE4 1060 aa21.36■■□□□ 1.01
ATG4B-221ENST00000483778 SOWAHBA6NEL2 793 aa21.35■■□□□ 1.01
ATG4B-221ENST00000483778 PTGS1P23219 599 aa21.35■■□□□ 1.01
ATG4B-221ENST00000483778 NOVP48745 357 aa21.35■■□□□ 1.01
ATG4B-221ENST00000483778 STAT2P52630 851 aa21.35■■□□□ 1.01
ATG4B-221ENST00000483778 OAZ1P54368 228 aa21.35■■□□□ 1.01
ATG4B-221ENST00000483778 KCNA10Q16322 511 aa21.35■■□□□ 1.01
ATG4B-221ENST00000483778 CCDC144BQ3MJ40 725 aa21.35■■□□□ 1.01
ATG4B-221ENST00000483778 MCMDC2Q4G0Z9 681 aa21.35■■□□□ 1.01
ATG4B-221ENST00000483778 MUM1L1Q5H9M0 696 aa21.35■■□□□ 1.01
ATG4B-221ENST00000483778 CCDC174Q6PII3 467 aa21.35■■□□□ 1.01
ATG4B-221ENST00000483778 ZNF467Q7Z7K2 595 aaPredicted RBP21.35■■□□□ 1.01
ATG4B-221ENST00000483778 CHURC1Q8WUH1 139 aa21.35■■□□□ 1.01
ATG4B-221ENST00000483778 KATNBL1Q9H079 304 aa21.35■■□□□ 1.01
ATG4B-221ENST00000483778 PRR12Q9ULL5 1215 aa21.35■■□□□ 1.01
ATG4B-221ENST00000483778 ASTN1O14525 1302 aa21.34■■□□□ 1.01
ATG4B-221ENST00000483778 ORC4O43929 436 aa21.34■■□□□ 1.01
ATG4B-221ENST00000483778 HSPD1P10809 573 aaKnown RBP21.34■■□□□ 1.01
ATG4B-221ENST00000483778 ACLYP53396 1101 aa21.34■■□□□ 1.01
ATG4B-221ENST00000483778 EPHB4P54760 987 aa21.34■■□□□ 1.01
ATG4B-221ENST00000483778 IKQ13123 557 aaPredicted RBP21.34■■□□□ 1.01
ATG4B-221ENST00000483778 ARMCX2Q7L311 632 aa21.34■■□□□ 1.01
ATG4B-221ENST00000483778 FAM160B2Q86V87 743 aa21.34■■□□□ 1.01
ATG4B-221ENST00000483778 CCDC144CPQ8IYA2 1237 aa21.34■■□□□ 1.01
ATG4B-221ENST00000483778 FAM133AQ8N9E0 248 aa21.34■■□□□ 1.01
ATG4B-221ENST00000483778 PURBQ96QR8 312 aaKnown RBP21.34■■□□□ 1.01
ATG4B-221ENST00000483778 A1CFQ9NQ94 594 aaKnown RBP21.34■■□□□ 1.01
ATG4B-221ENST00000483778 RNF146Q9NTX7 359 aa21.34■■□□□ 1.01
ATG4B-221ENST00000483778 POTEB2H3BUK9 544 aa21.33■■□□□ 1.01
ATG4B-221ENST00000483778 ALAS1P13196 640 aa21.33■■□□□ 1.01
ATG4B-221ENST00000483778 SLC16A2P36021 539 aa21.33■■□□□ 1.01
ATG4B-221ENST00000483778 HAND2P61296 217 aa21.33■■□□□ 1.01
ATG4B-221ENST00000483778 RRP12Q5JTH9 1297 aaKnown RBP21.33■■□□□ 1.01
ATG4B-221ENST00000483778 SMC5Q8IY18 1101 aa21.33■■□□□ 1.01
ATG4B-221ENST00000483778 TRERF1Q96PN7 1200 aa21.33■■□□□ 1.01
ATG4B-221ENST00000483778 FBXO40Q9UH90 709 aa21.33■■□□□ 1.01
ATG4B-221ENST00000483778 A0A0C4DFX4 3053 aa21.32■■□□□ 1
ATG4B-221ENST00000483778 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.32■■□□□ 1
ATG4B-221ENST00000483778 CTAGE5O15320 804 aa21.32■■□□□ 1
ATG4B-221ENST00000483778 PLA2G6O60733 806 aa21.32■■□□□ 1
ATG4B-221ENST00000483778 PQBP1O60828 265 aaKnown RBP21.32■■□□□ 1
ATG4B-221ENST00000483778 DUSP11O75319 330 aaKnown RBP21.32■■□□□ 1
ATG4B-221ENST00000483778 TMEM63BQ5T3F8 832 aa21.32■■□□□ 1
ATG4B-221ENST00000483778 PLEKHM2Q8IWE5 1019 aa21.32■■□□□ 1
ATG4B-221ENST00000483778 EXOC6Q8TAG9 804 aa21.32■■□□□ 1
ATG4B-221ENST00000483778 RILPL2Q969X0 211 aa21.32■■□□□ 1
ATG4B-221ENST00000483778 TSEN34Q9BSV6 310 aaKnown RBP21.32■■□□□ 1
ATG4B-221ENST00000483778 ACAD9Q9H845 621 aa21.32■■□□□ 1
ATG4B-221ENST00000483778 TRIM6-TRIM34B2RNG4 842 aa21.31■■□□□ 1
ATG4B-221ENST00000483778 FDX1P10109 184 aa21.31■■□□□ 1
ATG4B-221ENST00000483778 FAAP100Q0VG06 881 aa21.31■■□□□ 1
ATG4B-221ENST00000483778 SLC17A8Q8NDX2 589 aa21.31■■□□□ 1
ATG4B-221ENST00000483778 FAM161BQ96MY7 647 aa21.31■■□□□ 1
ATG4B-221ENST00000483778 TMEM47Q9BQJ4 181 aa21.31■■□□□ 1
ATG4B-221ENST00000483778 ABHD16BQ9H3Z7 469 aa21.31■■□□□ 1
ATG4B-221ENST00000483778 TOMM22Q9NS69 142 aa21.31■■□□□ 1
ATG4B-221ENST00000483778 LRRC37A2A6NM11 1700 aa21.3■■□□□ 1
ATG4B-221ENST00000483778 CLTBP09497 229 aa21.3■■□□□ 1
ATG4B-221ENST00000483778 UPF3AQ9H1J1 476 aaKnown RBP21.3■■□□□ 1
ATG4B-221ENST00000483778 GPCPD1Q9NPB8 672 aa21.3■■□□□ 1
ATG4B-221ENST00000483778 FRMPD2Q68DX3 1309 aaPredicted RBP21.29■■□□□ 1
ATG4B-221ENST00000483778 KIAA0355O15063 1070 aa21.29■■□□□ 1
ATG4B-221ENST00000483778 C6orf222P0C671 652 aaPredicted RBP21.29■■□□□ 1
ATG4B-221ENST00000483778 BEX3Q00994 111 aa21.29■■□□□ 1
ATG4B-221ENST00000483778 CCDC96Q2M329 555 aa21.29■■□□□ 1
ATG4B-221ENST00000483778 TBC1D10CQ8IV04 446 aa21.29■■□□□ 1
ATG4B-221ENST00000483778 GUCD1Q96NT3 240 aa21.29■■□□□ 1
ATG4B-221ENST00000483778 STARD7Q9NQZ5 370 aa21.29■■□□□ 1
ATG4B-221ENST00000483778 PDGFCQ9NRA1 345 aa21.29■■□□□ 1
ATG4B-221ENST00000483778 ASGR1P07306 291 aa21.28■■□□□ 1
ATG4B-221ENST00000483778 SDSP20132 328 aa21.28■■□□□ 1
ATG4B-221ENST00000483778 CDK7P50613 346 aa21.28■■□□□ 1
ATG4B-221ENST00000483778 GJA9P57773 515 aa21.28■■□□□ 1
ATG4B-221ENST00000483778 ANKRD33Q7Z3H0 272 aa21.28■■□□□ 1
ATG4B-221ENST00000483778 CHD1LQ86WJ1 897 aa21.28■■□□□ 1
ATG4B-221ENST00000483778 RWDD1Q9H446 243 aaPredicted RBP21.28■■□□□ 1
ATG4B-221ENST00000483778 TMEM39AQ9NV64 488 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms