RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 LAD1O00515 517 aa13.99□□□□□ -0.17
LINC00477-201ENST00000483544 GTPBP6O43824 516 aaPredicted RBP13.99□□□□□ -0.17
LINC00477-201ENST00000483544 CLCN6P51797 869 aa13.99□□□□□ -0.17
LINC00477-201ENST00000483544 PPP4CP60510 307 aa13.99□□□□□ -0.17
LINC00477-201ENST00000483544 FMR1Q06787 632 aaKnown RBP eCLIP13.99□□□□□ -0.17
LINC00477-201ENST00000483544 TRIM14Q14142 442 aa13.99□□□□□ -0.17
LINC00477-201ENST00000483544 CDKAL1Q5VV42 579 aa13.99□□□□□ -0.17
LINC00477-201ENST00000483544 CMTR1Q8N1G2 835 aaKnown RBP13.99□□□□□ -0.17
LINC00477-201ENST00000483544 SRBD1Q8N5C6 995 aaKnown RBP13.99□□□□□ -0.17
LINC00477-201ENST00000483544 MSL3Q8N5Y2 521 aaKnown RBP13.99□□□□□ -0.17
LINC00477-201ENST00000483544 CCDC148Q8NFR7 591 aa13.99□□□□□ -0.17
LINC00477-201ENST00000483544 ZNF526Q8TF50 670 aaPredicted RBP13.99□□□□□ -0.17
LINC00477-201ENST00000483544 KAT14Q9H8E8 782 aa13.99□□□□□ -0.17
LINC00477-201ENST00000483544 PPP2R2CQ9Y2T4 447 aa13.99□□□□□ -0.17
LINC00477-201ENST00000483544 SYNRGQ9UMZ2 1314 aa13.99□□□□□ -0.17
LINC00477-201ENST00000483544 IRS2Q9Y4H2 1338 aa13.99□□□□□ -0.17
LINC00477-201ENST00000483544 LY75O60449 1722 aa13.99□□□□□ -0.17
LINC00477-201ENST00000483544 TMEM232C9JQI7 657 aa13.98□□□□□ -0.17
LINC00477-201ENST00000483544 AKR1B15C9JRZ8 316 aaPredicted RBP13.98□□□□□ -0.17
LINC00477-201ENST00000483544 BAG3O95817 575 aa13.98□□□□□ -0.17
LINC00477-201ENST00000483544 TUBB4BP68371 445 aa13.98□□□□□ -0.17
LINC00477-201ENST00000483544 DDR1Q08345 913 aa13.98□□□□□ -0.17
LINC00477-201ENST00000483544 PTGDRQ13258 359 aa13.98□□□□□ -0.17
LINC00477-201ENST00000483544 TRIM65Q6PJ69 517 aa13.98□□□□□ -0.17
LINC00477-201ENST00000483544 DZIP1Q86YF9 867 aaKnown RBP13.98□□□□□ -0.17
LINC00477-201ENST00000483544 TC2NQ8N9U0 490 aa13.98□□□□□ -0.17
LINC00477-201ENST00000483544 SHISA4Q96DD7 197 aa13.98□□□□□ -0.17
LINC00477-201ENST00000483544 SBF2Q86WG5 1849 aa13.98□□□□□ -0.17
LINC00477-201ENST00000483544 KCNQ2O43526 872 aa13.98□□□□□ -0.17
LINC00477-201ENST00000483544 PPFIA2O75334 1257 aa13.98□□□□□ -0.17
LINC00477-201ENST00000483544 SCP2P22307 547 aa13.98□□□□□ -0.17
LINC00477-201ENST00000483544 GRM4Q14833 912 aa13.98□□□□□ -0.17
LINC00477-201ENST00000483544 C12orf60Q5U649 245 aa13.98□□□□□ -0.17
LINC00477-201ENST00000483544 GBP6Q6ZN66 633 aa13.98□□□□□ -0.17
LINC00477-201ENST00000483544 PPFIBP1Q86W92 1011 aa13.98□□□□□ -0.17
LINC00477-201ENST00000483544 PDILTQ8N807 584 aa13.98□□□□□ -0.17
LINC00477-201ENST00000483544 MAGEF1Q9HAY2 307 aa13.98□□□□□ -0.17
LINC00477-201ENST00000483544 VEZTQ9HBM0 779 aa13.98□□□□□ -0.17
LINC00477-201ENST00000483544 LRRC10BA6NIK2 292 aa13.97□□□□□ -0.17
LINC00477-201ENST00000483544 FECHP22830 423 aa13.97□□□□□ -0.17
LINC00477-201ENST00000483544 SMARCA1P28370 1054 aa13.97□□□□□ -0.17
LINC00477-201ENST00000483544 HOXA7P31268 230 aaPredicted RBP13.97□□□□□ -0.17
LINC00477-201ENST00000483544 PBX1P40424 430 aa13.97□□□□□ -0.17
LINC00477-201ENST00000483544 MRPL12P52815 198 aaKnown RBP13.97□□□□□ -0.17
LINC00477-201ENST00000483544 ORC2Q13416 577 aaPredicted RBP13.97□□□□□ -0.17
LINC00477-201ENST00000483544 ZNF174Q15697 407 aa13.97□□□□□ -0.17
LINC00477-201ENST00000483544 SLC5A9Q2M3M2 681 aa13.97□□□□□ -0.17
LINC00477-201ENST00000483544 NAIF1Q69YI7 327 aaPredicted RBP13.97□□□□□ -0.17
LINC00477-201ENST00000483544 BLIDQ8IZY5 108 aa13.97□□□□□ -0.17
LINC00477-201ENST00000483544 EPSTI1Q96J88 318 aa13.97□□□□□ -0.17
LINC00477-201ENST00000483544 TRIM6Q9C030 488 aaPredicted RBP13.97□□□□□ -0.17
LINC00477-201ENST00000483544 SPATS2LQ9NUQ6 558 aaKnown RBP13.97□□□□□ -0.17
LINC00477-201ENST00000483544 ADD3Q9UEY8 706 aaKnown RBP13.97□□□□□ -0.17
LINC00477-201ENST00000483544 RWDD2AQ9UIY3 292 aa13.97□□□□□ -0.17
LINC00477-201ENST00000483544 PCDHA4Q9UN74 947 aa13.97□□□□□ -0.17
LINC00477-201ENST00000483544 RTCBQ9Y3I0 505 aaKnown RBP13.97□□□□□ -0.17
LINC00477-201ENST00000483544 CYP2D7A0A087X1C5 515 aa13.96□□□□□ -0.17
LINC00477-201ENST00000483544 EFCAB8A8MWE9 144 aa13.96□□□□□ -0.17
LINC00477-201ENST00000483544 PPP1R3GB7ZBB8 358 aa13.96□□□□□ -0.17
LINC00477-201ENST00000483544 LDHBP07195 334 aaKnown RBP13.96□□□□□ -0.17
LINC00477-201ENST00000483544 OAS2P29728 719 aaKnown RBP13.96□□□□□ -0.17
LINC00477-201ENST00000483544 PRPHP41219 470 aa13.96□□□□□ -0.17
LINC00477-201ENST00000483544 PPP1R2P41236 205 aa13.96□□□□□ -0.17
LINC00477-201ENST00000483544 MNAT1P51948 309 aa13.96□□□□□ -0.17
LINC00477-201ENST00000483544 USP49Q70CQ1 688 aa13.96□□□□□ -0.17
LINC00477-201ENST00000483544 ZNF804AQ7Z570 1209 aa13.96□□□□□ -0.17
LINC00477-201ENST00000483544 CNGA4Q8IV77 575 aa13.96□□□□□ -0.17
LINC00477-201ENST00000483544 CUEDC2Q9H467 287 aa13.96□□□□□ -0.17
LINC00477-201ENST00000483544 LIMA1Q9UHB6 759 aaKnown RBP13.96□□□□□ -0.17
LINC00477-201ENST00000483544 MCM8Q9UJA3 840 aa13.96□□□□□ -0.17
LINC00477-201ENST00000483544 MYH1P12882 1939 aa13.96□□□□□ -0.18
LINC00477-201ENST00000483544 A0A087X0B3 334 aa13.95□□□□□ -0.18
LINC00477-201ENST00000483544 PRDM1O75626 825 aa13.95□□□□□ -0.18
LINC00477-201ENST00000483544 NEBLO76041 1014 aa13.95□□□□□ -0.18
LINC00477-201ENST00000483544 PLCG2P16885 1265 aa13.95□□□□□ -0.18
LINC00477-201ENST00000483544 TM4SF1P30408 202 aa13.95□□□□□ -0.18
LINC00477-201ENST00000483544 TBC1D8BQ0IIM8 1120 aa13.95□□□□□ -0.18
LINC00477-201ENST00000483544 GRAPQ13588 217 aa13.95□□□□□ -0.18
LINC00477-201ENST00000483544 RBBP5Q15291 538 aaKnown RBP13.95□□□□□ -0.18
LINC00477-201ENST00000483544 EARS2Q5JPH6 523 aaKnown RBP13.95□□□□□ -0.18
LINC00477-201ENST00000483544 ZNF658Q5TYW1 1059 aaPredicted RBP13.95□□□□□ -0.18
LINC00477-201ENST00000483544 RCSD1Q6JBY9 416 aa13.95□□□□□ -0.18
LINC00477-201ENST00000483544 PDXDC2PQ6P474 469 aa13.95□□□□□ -0.18
LINC00477-201ENST00000483544 APTXQ7Z2E3 356 aaKnown RBP13.95□□□□□ -0.18
LINC00477-201ENST00000483544 GRAPLQ8TC17 118 aaPredicted RBP13.95□□□□□ -0.18
LINC00477-201ENST00000483544 CCDC12Q8WUD4 166 aaPredicted RBP13.95□□□□□ -0.18
LINC00477-201ENST00000483544 SAMSN1Q9NSI8 373 aaKnown RBP13.95□□□□□ -0.18
LINC00477-201ENST00000483544 MCM9Q9NXL9 1143 aa13.95□□□□□ -0.18
LINC00477-201ENST00000483544 SPATA31A6Q5VVP1 1343 aa13.95□□□□□ -0.18
LINC00477-201ENST00000483544 THSD7AQ9UPZ6 1657 aa13.95□□□□□ -0.18
LINC00477-201ENST00000483544 VWA3AA6NCI4 1184 aa13.95□□□□□ -0.18
LINC00477-201ENST00000483544 FAM205CA6NFA0 338 aa13.95□□□□□ -0.18
LINC00477-201ENST00000483544 POLR3GO15318 223 aaPredicted RBP13.95□□□□□ -0.18
LINC00477-201ENST00000483544 CCDC175P0C221 793 aa13.95□□□□□ -0.18
LINC00477-201ENST00000483544 PRDX5P30044 214 aa13.95□□□□□ -0.18
LINC00477-201ENST00000483544 AFMP43652 599 aa13.95□□□□□ -0.18
LINC00477-201ENST00000483544 USP5P45974 858 aa13.95□□□□□ -0.18
LINC00477-201ENST00000483544 XDHP47989 1333 aa13.95□□□□□ -0.18
LINC00477-201ENST00000483544 KCNB1Q14721 858 aa13.95□□□□□ -0.18
LINC00477-201ENST00000483544 BICDL1Q6ZP65 573 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms