RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 ASPRV1Q53RT3 343 aa17.71■□□□□ 0.43
COL16A1-213ENST00000482910 IFIT1BQ5T764 474 aaKnown RBP17.71■□□□□ 0.43
COL16A1-213ENST00000482910 TTBK2Q6IQ55 1244 aa17.71■□□□□ 0.43
COL16A1-213ENST00000482910 STOX1Q6ZVD7 989 aa17.71■□□□□ 0.43
COL16A1-213ENST00000482910 MAML3Q96JK9 1138 aa17.71■□□□□ 0.43
COL16A1-213ENST00000482910 DEFB118Q96PH6 123 aa17.71■□□□□ 0.43
COL16A1-213ENST00000482910 TAF6LQ9Y6J9 622 aa17.71■□□□□ 0.43
COL16A1-213ENST00000482910 FRMPD2Q68DX3 1309 aaPredicted RBP17.71■□□□□ 0.42
COL16A1-213ENST00000482910 ICAM1P05362 532 aa17.7■□□□□ 0.42
COL16A1-213ENST00000482910 SART3Q15020 963 aaKnown RBP17.7■□□□□ 0.42
COL16A1-213ENST00000482910 UBE2Q1Q7Z7E8 422 aa17.7■□□□□ 0.42
COL16A1-213ENST00000482910 MB21D2Q8IYB1 491 aaPredicted RBP17.7■□□□□ 0.42
COL16A1-213ENST00000482910 MSL3Q8N5Y2 521 aaKnown RBP17.7■□□□□ 0.42
COL16A1-213ENST00000482910 ANKLE1Q8NAG6 615 aa17.7■□□□□ 0.42
COL16A1-213ENST00000482910 CHMP4CQ96CF2 233 aa17.7■□□□□ 0.42
COL16A1-213ENST00000482910 ACAD9Q9H845 621 aa17.7■□□□□ 0.42
COL16A1-213ENST00000482910 GPCPD1Q9NPB8 672 aa17.7■□□□□ 0.42
COL16A1-213ENST00000482910 NRBP1Q9UHY1 535 aa17.7■□□□□ 0.42
COL16A1-213ENST00000482910 ERICH2A1L162 156 aa17.69■□□□□ 0.42
COL16A1-213ENST00000482910 SLC27A2O14975 620 aa17.69■□□□□ 0.42
COL16A1-213ENST00000482910 SLC16A2P36021 539 aa17.69■□□□□ 0.42
COL16A1-213ENST00000482910 RNF20Q5VTR2 975 aa17.69■□□□□ 0.42
COL16A1-213ENST00000482910 CREB3L3Q68CJ9 461 aa17.69■□□□□ 0.42
COL16A1-213ENST00000482910 ZNF467Q7Z7K2 595 aaPredicted RBP17.69■□□□□ 0.42
COL16A1-213ENST00000482910 DDX11Q96FC9 970 aa17.69■□□□□ 0.42
COL16A1-213ENST00000482910 AGBL1Q96MI9 1066 aa17.69■□□□□ 0.42
COL16A1-213ENST00000482910 IFIT3O14879 490 aaKnown RBP17.68■□□□□ 0.42
COL16A1-213ENST00000482910 MSCO60682 206 aa17.68■□□□□ 0.42
COL16A1-213ENST00000482910 TFRCP02786 760 aaKnown RBP17.68■□□□□ 0.42
COL16A1-213ENST00000482910 CYBAP13498 195 aa17.68■□□□□ 0.42
COL16A1-213ENST00000482910 CYP2C19P33261 490 aa17.68■□□□□ 0.42
COL16A1-213ENST00000482910 RNF146Q9NTX7 359 aa17.68■□□□□ 0.42
COL16A1-213ENST00000482910 OGDHLQ9ULD0 1010 aa17.68■□□□□ 0.42
COL16A1-213ENST00000482910 CCPG1Q9ULG6 757 aa17.68■□□□□ 0.42
COL16A1-213ENST00000482910 WDR19Q8NEZ3 1342 aa17.68■□□□□ 0.42
COL16A1-213ENST00000482910 SMCHD1A6NHR9 2005 aa17.67■□□□□ 0.42
COL16A1-213ENST00000482910 PGK2P07205 417 aa17.67■□□□□ 0.42
COL16A1-213ENST00000482910 PARP1P09874 1014 aaKnown RBP17.67■□□□□ 0.42
COL16A1-213ENST00000482910 CCND3P30281 292 aaPredicted RBP17.67■□□□□ 0.42
COL16A1-213ENST00000482910 CCDC174Q6PII3 467 aa17.67■□□□□ 0.42
COL16A1-213ENST00000482910 MAMDC4Q6UXC1 1216 aa17.67■□□□□ 0.42
COL16A1-213ENST00000482910 ANKRD35Q8N283 1001 aa17.67■□□□□ 0.42
COL16A1-213ENST00000482910 TRERF1Q96PN7 1200 aa17.67■□□□□ 0.42
COL16A1-213ENST00000482910 TINF2Q9BSI4 451 aa17.67■□□□□ 0.42
COL16A1-213ENST00000482910 FRMPD3Q5JV73 1810 aa17.67■□□□□ 0.42
COL16A1-213ENST00000482910 PFASO15067 1338 aa17.67■□□□□ 0.42
COL16A1-213ENST00000482910 MKI67P46013 3256 aaKnown RBP17.67■□□□□ 0.42
COL16A1-213ENST00000482910 FARP2O94887 1054 aaPredicted RBP17.66■□□□□ 0.42
COL16A1-213ENST00000482910 ALAS1P13196 640 aa17.66■□□□□ 0.42
COL16A1-213ENST00000482910 MCM5P33992 734 aa17.66■□□□□ 0.42
COL16A1-213ENST00000482910 SLC4A3P48751 1232 aa17.66■□□□□ 0.42
COL16A1-213ENST00000482910 ANTXR2P58335 489 aa17.66■□□□□ 0.42
COL16A1-213ENST00000482910 WTAPQ15007 396 aa17.66■□□□□ 0.42
COL16A1-213ENST00000482910 TSGA10IPQ3SY00 556 aa17.66■□□□□ 0.42
COL16A1-213ENST00000482910 LHX8Q68G74 356 aa17.66■□□□□ 0.42
COL16A1-213ENST00000482910 IGDCC4Q8TDY8 1250 aa17.66■□□□□ 0.42
COL16A1-213ENST00000482910 TMEM87BQ96K49 555 aa17.66■□□□□ 0.42
COL16A1-213ENST00000482910 A1CFQ9NQ94 594 aaKnown RBP17.66■□□□□ 0.42
COL16A1-213ENST00000482910 SYNGAP1Q96PV0 1343 aa17.66■□□□□ 0.42
COL16A1-213ENST00000482910 GOLGA8HP0CJ92 632 aa17.65■□□□□ 0.42
COL16A1-213ENST00000482910 SNAP25P60880 206 aa17.65■□□□□ 0.42
COL16A1-213ENST00000482910 TMEM67Q5HYA8 995 aa17.65■□□□□ 0.42
COL16A1-213ENST00000482910 TMTC2Q8N394 836 aa17.65■□□□□ 0.42
COL16A1-213ENST00000482910 FAM133AQ8N9E0 248 aa17.65■□□□□ 0.42
COL16A1-213ENST00000482910 TRPV1Q8NER1 839 aa17.65■□□□□ 0.42
COL16A1-213ENST00000482910 MAF1Q9H063 256 aa17.65■□□□□ 0.42
COL16A1-213ENST00000482910 HOMER2Q9NSB8 354 aa17.65■□□□□ 0.42
COL16A1-213ENST00000482910 DDX20Q9UHI6 824 aaKnown RBP17.65■□□□□ 0.42
COL16A1-213ENST00000482910 PALM3A6NDB9 673 aaPredicted RBP17.64■□□□□ 0.41
COL16A1-213ENST00000482910 SEPT4O43236 478 aa17.64■□□□□ 0.41
COL16A1-213ENST00000482910 EPB41L2O43491 1005 aaKnown RBP17.64■□□□□ 0.41
COL16A1-213ENST00000482910 TROAPQ12815 778 aa17.64■□□□□ 0.41
COL16A1-213ENST00000482910 MAP3K14Q99558 947 aa17.64■□□□□ 0.41
COL16A1-213ENST00000482910 PCDH10Q9P2E7 1040 aa17.64■□□□□ 0.41
COL16A1-213ENST00000482910 MYH6P13533 1939 aa17.64■□□□□ 0.41
COL16A1-213ENST00000482910 POTEB2H3BUK9 544 aa17.63■□□□□ 0.41
COL16A1-213ENST00000482910 PRC1O43663 620 aa17.63■□□□□ 0.41
COL16A1-213ENST00000482910 REC8O95072 547 aa17.63■□□□□ 0.41
COL16A1-213ENST00000482910 LIFRP42702 1097 aa17.63■□□□□ 0.41
COL16A1-213ENST00000482910 KRT32Q14532 448 aa17.63■□□□□ 0.41
COL16A1-213ENST00000482910 GRM4Q14833 912 aa17.63■□□□□ 0.41
COL16A1-213ENST00000482910 MUM1L1Q5H9M0 696 aa17.63■□□□□ 0.41
COL16A1-213ENST00000482910 CHST3Q7LGC8 479 aa17.63■□□□□ 0.41
COL16A1-213ENST00000482910 CATIPQ7Z7H3 387 aa17.63■□□□□ 0.41
COL16A1-213ENST00000482910 ADGRF4Q8IZF3 695 aa17.63■□□□□ 0.41
COL16A1-213ENST00000482910 FGD4Q96M96 766 aa17.63■□□□□ 0.41
COL16A1-213ENST00000482910 UBA5Q9GZZ9 404 aa17.63■□□□□ 0.41
COL16A1-213ENST00000482910 LY9Q9HBG7 655 aa17.63■□□□□ 0.41
COL16A1-213ENST00000482910 CYP39A1Q9NYL5 469 aa17.63■□□□□ 0.41
COL16A1-213ENST00000482910 MAD2L2Q9UI95 211 aa17.63■□□□□ 0.41
COL16A1-213ENST00000482910 LOC102724159A0A0B4J2E5 919 aa17.62■□□□□ 0.41
COL16A1-213ENST00000482910 KLRF2D3W0D1 207 aa17.62■□□□□ 0.41
COL16A1-213ENST00000482910 CNGA1P29973 690 aa17.62■□□□□ 0.41
COL16A1-213ENST00000482910 MNX1P50219 401 aaPredicted RBP17.62■□□□□ 0.41
COL16A1-213ENST00000482910 PWP2Q15269 919 aaKnown RBP17.62■□□□□ 0.41
COL16A1-213ENST00000482910 CDC37Q16543 378 aaPredicted RBP17.62■□□□□ 0.41
COL16A1-213ENST00000482910 NECAB2Q7Z6G3 386 aa17.62■□□□□ 0.41
COL16A1-213ENST00000482910 STAG2Q8N3U4 1231 aa17.62■□□□□ 0.41
COL16A1-213ENST00000482910 KCNB2Q92953 911 aa17.62■□□□□ 0.41
COL16A1-213ENST00000482910 MTMR8Q96EF0 704 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms