RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 SNX14Q9Y5W7 946 aa19.36■□□□□ 0.69
HMGN1-214ENST00000482733 CCDC69A6NI79 296 aa19.35■□□□□ 0.69
HMGN1-214ENST00000482733 INHAP05111 366 aa19.35■□□□□ 0.69
HMGN1-214ENST00000482733 EXOSC10Q01780 885 aaKnown RBP19.35■□□□□ 0.69
HMGN1-214ENST00000482733 GRM4Q14833 912 aa19.35■□□□□ 0.69
HMGN1-214ENST00000482733 ADCK5Q3MIX3 580 aa19.35■□□□□ 0.69
HMGN1-214ENST00000482733 AGBL1Q96MI9 1066 aa19.35■□□□□ 0.69
HMGN1-214ENST00000482733 TMEM106CQ9BVX2 250 aa19.35■□□□□ 0.69
HMGN1-214ENST00000482733 UBA5Q9GZZ9 404 aa19.35■□□□□ 0.69
HMGN1-214ENST00000482733 SENP2Q9HC62 589 aa19.35■□□□□ 0.69
HMGN1-214ENST00000482733 CCPG1Q9ULG6 757 aa19.35■□□□□ 0.69
HMGN1-214ENST00000482733 PALM3A6NDB9 673 aaPredicted RBP19.34■□□□□ 0.69
HMGN1-214ENST00000482733 CAPN15O75808 1086 aa19.34■□□□□ 0.69
HMGN1-214ENST00000482733 CALM1P0DP23 149 aa19.34■□□□□ 0.69
HMGN1-214ENST00000482733 CALM2P0DP24 149 aa19.34■□□□□ 0.69
HMGN1-214ENST00000482733 CALM3P0DP25 149 aa19.34■□□□□ 0.69
HMGN1-214ENST00000482733 SGMS1Q86VZ5 419 aa19.34■□□□□ 0.69
HMGN1-214ENST00000482733 ZNF654Q8IZM8 581 aa19.34■□□□□ 0.69
HMGN1-214ENST00000482733 TRIB2Q92519 343 aa19.34■□□□□ 0.69
HMGN1-214ENST00000482733 JAKMIP1Q96N16 626 aaKnown RBP19.34■□□□□ 0.69
HMGN1-214ENST00000482733 ACAD9Q9H845 621 aa19.34■□□□□ 0.69
HMGN1-214ENST00000482733 MAD2L2Q9UI95 211 aa19.34■□□□□ 0.69
HMGN1-214ENST00000482733 DIS3Q9Y2L1 958 aaKnown RBP19.34■□□□□ 0.69
HMGN1-214ENST00000482733 KLRF2D3W0D1 207 aa19.33■□□□□ 0.68
HMGN1-214ENST00000482733 ALAS1P13196 640 aa19.33■□□□□ 0.68
HMGN1-214ENST00000482733 KIF5BP33176 963 aa19.33■□□□□ 0.68
HMGN1-214ENST00000482733 SNAP25P60880 206 aa19.33■□□□□ 0.68
HMGN1-214ENST00000482733 BLOC1S2Q6QNY1 142 aa19.33■□□□□ 0.68
HMGN1-214ENST00000482733 ADGRF4Q8IZF3 695 aa19.33■□□□□ 0.68
HMGN1-214ENST00000482733 NUP133Q8WUM0 1156 aa19.33■□□□□ 0.68
HMGN1-214ENST00000482733 DDX11Q96FC9 970 aa19.33■□□□□ 0.68
HMGN1-214ENST00000482733 TRERF1Q96PN7 1200 aa19.33■□□□□ 0.68
HMGN1-214ENST00000482733 GPHNQ9NQX3 736 aaPredicted RBP19.33■□□□□ 0.68
HMGN1-214ENST00000482733 RNF146Q9NTX7 359 aa19.33■□□□□ 0.68
HMGN1-214ENST00000482733 SLC12A7Q9Y666 1083 aa19.33■□□□□ 0.68
HMGN1-214ENST00000482733 DHX16O60231 1041 aaKnown RBP19.32■□□□□ 0.68
HMGN1-214ENST00000482733 COBLO75128 1261 aa19.32■□□□□ 0.68
HMGN1-214ENST00000482733 COL9A3Q14050 684 aaPredicted RBP19.32■□□□□ 0.68
HMGN1-214ENST00000482733 MFSD14CQ5VZR4 134 aa19.32■□□□□ 0.68
HMGN1-214ENST00000482733 OLFML2BQ68BL8 750 aa19.32■□□□□ 0.68
HMGN1-214ENST00000482733 SYNE3Q6ZMZ3 975 aa19.32■□□□□ 0.68
HMGN1-214ENST00000482733 ANKRD35Q8N283 1001 aa19.32■□□□□ 0.68
HMGN1-214ENST00000482733 STAG2Q8N3U4 1231 aa19.32■□□□□ 0.68
HMGN1-214ENST00000482733 CTCFLQ8NI51 663 aaPredicted RBP19.32■□□□□ 0.68
HMGN1-214ENST00000482733 NPLOC4Q8TAT6 608 aa19.32■□□□□ 0.68
HMGN1-214ENST00000482733 LRRC2Q9BYS8 371 aa19.32■□□□□ 0.68
HMGN1-214ENST00000482733 HOMER2Q9NSB8 354 aa19.32■□□□□ 0.68
HMGN1-214ENST00000482733 ZNF236Q9UL36 1845 aa19.31■□□□□ 0.68
HMGN1-214ENST00000482733 CCL5P13501 91 aa19.31■□□□□ 0.68
HMGN1-214ENST00000482733 GNAQP50148 359 aa19.31■□□□□ 0.68
HMGN1-214ENST00000482733 FGD1P98174 961 aa19.31■□□□□ 0.68
HMGN1-214ENST00000482733 CDC37Q16543 378 aaPredicted RBP19.31■□□□□ 0.68
HMGN1-214ENST00000482733 CCL14Q16627 93 aa19.31■□□□□ 0.68
HMGN1-214ENST00000482733 LZTS2Q9BRK4 669 aa19.31■□□□□ 0.68
HMGN1-214ENST00000482733 CPVLQ9H3G5 476 aa19.31■□□□□ 0.68
HMGN1-214ENST00000482733 JMJD4Q9H9V9 463 aa19.31■□□□□ 0.68
HMGN1-214ENST00000482733 COL11A1P12107 1806 aaPredicted RBP19.3■□□□□ 0.68
HMGN1-214ENST00000482733 PFASO15067 1338 aa19.3■□□□□ 0.68
HMGN1-214ENST00000482733 RPTORQ8N122 1335 aa19.3■□□□□ 0.68
HMGN1-214ENST00000482733 MYCP01106 439 aaPredicted RBP19.3■□□□□ 0.68
HMGN1-214ENST00000482733 CAPN2P17655 700 aa19.3■□□□□ 0.68
HMGN1-214ENST00000482733 MTFR1Q15390 333 aa19.3■□□□□ 0.68
HMGN1-214ENST00000482733 ZNF792Q3KQV3 632 aa19.3■□□□□ 0.68
HMGN1-214ENST00000482733 MAP3K21Q5TCX8 1036 aa19.3■□□□□ 0.68
HMGN1-214ENST00000482733 TM6SF1Q9BZW5 370 aa19.3■□□□□ 0.68
HMGN1-214ENST00000482733 RNF208Q9H0X6 261 aa19.3■□□□□ 0.68
HMGN1-214ENST00000482733 VAT1LQ9HCJ6 419 aa19.3■□□□□ 0.68
HMGN1-214ENST00000482733 PLXNB2O15031 1838 aa19.3■□□□□ 0.68
HMGN1-214ENST00000482733 DOCK3Q8IZD9 2030 aa19.29■□□□□ 0.68
HMGN1-214ENST00000482733 DNAJC25-GNG10A0A024R161 153 aa19.29■□□□□ 0.68
HMGN1-214ENST00000482733 PGK2P07205 417 aa19.29■□□□□ 0.68
HMGN1-214ENST00000482733 PRKAR2AP13861 404 aaKnown RBP19.29■□□□□ 0.68
HMGN1-214ENST00000482733 CASTP20810 708 aaKnown RBP19.29■□□□□ 0.68
HMGN1-214ENST00000482733 RPS6KB1P23443 525 aa19.29■□□□□ 0.68
HMGN1-214ENST00000482733 SMARCA1P28370 1054 aa19.29■□□□□ 0.68
HMGN1-214ENST00000482733 SOX10P56693 466 aa19.29■□□□□ 0.68
HMGN1-214ENST00000482733 TRAF1Q13077 416 aa19.29■□□□□ 0.68
HMGN1-214ENST00000482733 FBXL16Q8N461 479 aa19.29■□□□□ 0.68
HMGN1-214ENST00000482733 MSL3Q8N5Y2 521 aaKnown RBP19.29■□□□□ 0.68
HMGN1-214ENST00000482733 MTMR8Q96EF0 704 aa19.29■□□□□ 0.68
HMGN1-214ENST00000482733 MAML3Q96JK9 1138 aa19.29■□□□□ 0.68
HMGN1-214ENST00000482733 TCEANC2Q96MN5 208 aa19.29■□□□□ 0.68
HMGN1-214ENST00000482733 MAF1Q9H063 256 aa19.29■□□□□ 0.68
HMGN1-214ENST00000482733 UNC93B1Q9H1C4 597 aa19.29■□□□□ 0.68
HMGN1-214ENST00000482733 RIOX1Q9H6W3 641 aa19.29■□□□□ 0.68
HMGN1-214ENST00000482733 HMX1Q9NP08 348 aaPredicted RBP19.29■□□□□ 0.68
HMGN1-214ENST00000482733 FLRT1Q9NZU1 646 aa19.29■□□□□ 0.68
HMGN1-214ENST00000482733 CENPFP49454 3210 aa19.28■□□□□ 0.68
HMGN1-214ENST00000482733 ZBTB5O15062 677 aa19.28■□□□□ 0.68
HMGN1-214ENST00000482733 IGHA2P01877 340 aa19.28■□□□□ 0.68
HMGN1-214ENST00000482733 GJB1P08034 283 aa19.28■□□□□ 0.68
HMGN1-214ENST00000482733 RCAN1P53805 252 aa19.28■□□□□ 0.68
HMGN1-214ENST00000482733 ANAPC15P60006 121 aa19.28■□□□□ 0.68
HMGN1-214ENST00000482733 CACNB2Q08289 660 aaPredicted RBP19.28■□□□□ 0.68
HMGN1-214ENST00000482733 QRICH1Q2TAL8 776 aa19.28■□□□□ 0.68
HMGN1-214ENST00000482733 ZNF467Q7Z7K2 595 aaPredicted RBP19.28■□□□□ 0.68
HMGN1-214ENST00000482733 FBXO11Q86XK2 927 aa19.28■□□□□ 0.68
HMGN1-214ENST00000482733 MYL10Q9BUA6 226 aa19.28■□□□□ 0.68
HMGN1-214ENST00000482733 ZSWIM6Q9HCJ5 1215 aa19.28■□□□□ 0.68
HMGN1-214ENST00000482733 A1CFQ9NQ94 594 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms