RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 SYDE2Q5VT97 1194 aa18.44■□□□□ 0.54
COL16A1-212ENST00000482478 AGBL1Q96MI9 1066 aa18.44■□□□□ 0.54
COL16A1-212ENST00000482478 GPCPD1Q9NPB8 672 aa18.44■□□□□ 0.54
COL16A1-212ENST00000482478 NRBP1Q9UHY1 535 aa18.44■□□□□ 0.54
COL16A1-212ENST00000482478 ZMYND8Q9ULU4 1186 aaPredicted RBP18.44■□□□□ 0.54
COL16A1-212ENST00000482478 PLA2G6O60733 806 aa18.43■□□□□ 0.54
COL16A1-212ENST00000482478 PDHBP11177 359 aa18.43■□□□□ 0.54
COL16A1-212ENST00000482478 TAL1P17542 331 aaPredicted RBP18.43■□□□□ 0.54
COL16A1-212ENST00000482478 SLC16A2P36021 539 aa18.43■□□□□ 0.54
COL16A1-212ENST00000482478 NT5C2P49902 561 aa18.43■□□□□ 0.54
COL16A1-212ENST00000482478 GJC2Q5T442 439 aaPredicted RBP18.43■□□□□ 0.54
COL16A1-212ENST00000482478 LENG1Q96BZ8 264 aaPredicted RBP18.43■□□□□ 0.54
COL16A1-212ENST00000482478 UBAC1Q9BSL1 405 aa18.43■□□□□ 0.54
COL16A1-212ENST00000482478 SENP6Q9GZR1 1112 aaPredicted RBP18.43■□□□□ 0.54
COL16A1-212ENST00000482478 KAT14Q9H8E8 782 aa18.43■□□□□ 0.54
COL16A1-212ENST00000482478 ZNF536O15090 1300 aa18.43■□□□□ 0.54
COL16A1-212ENST00000482478 SYNGAP1Q96PV0 1343 aa18.43■□□□□ 0.54
COL16A1-212ENST00000482478 COL6A1P12109 1028 aa18.42■□□□□ 0.54
COL16A1-212ENST00000482478 AKR1A1P14550 325 aa18.42■□□□□ 0.54
COL16A1-212ENST00000482478 TKFCQ3LXA3 575 aa18.42■□□□□ 0.54
COL16A1-212ENST00000482478 TTBK2Q6IQ55 1244 aa18.42■□□□□ 0.54
COL16A1-212ENST00000482478 MSL3Q8N5Y2 521 aaKnown RBP18.42■□□□□ 0.54
COL16A1-212ENST00000482478 ARRDC4Q8NCT1 418 aa18.42■□□□□ 0.54
COL16A1-212ENST00000482478 TRERF1Q96PN7 1200 aa18.42■□□□□ 0.54
COL16A1-212ENST00000482478 KRT23Q9C075 422 aa18.42■□□□□ 0.54
COL16A1-212ENST00000482478 CNNM2Q9H8M5 875 aa18.42■□□□□ 0.54
COL16A1-212ENST00000482478 A1CFQ9NQ94 594 aaKnown RBP18.42■□□□□ 0.54
COL16A1-212ENST00000482478 XPNPEP3Q9NQH7 507 aa18.42■□□□□ 0.54
COL16A1-212ENST00000482478 TNKSO95271 1327 aa18.42■□□□□ 0.54
COL16A1-212ENST00000482478 ZNFX1Q9P2E3 1918 aaKnown RBP18.41■□□□□ 0.54
COL16A1-212ENST00000482478 LRRC37A2A6NM11 1700 aa18.41■□□□□ 0.54
COL16A1-212ENST00000482478 POTEB2H3BUK9 544 aa18.41■□□□□ 0.54
COL16A1-212ENST00000482478 ICAM1P05362 532 aa18.41■□□□□ 0.54
COL16A1-212ENST00000482478 SYN1P17600 705 aa18.41■□□□□ 0.54
COL16A1-212ENST00000482478 CHMLP26374 656 aa18.41■□□□□ 0.54
COL16A1-212ENST00000482478 ATN1P54259 1190 aaPredicted RBP18.41■□□□□ 0.54
COL16A1-212ENST00000482478 CCDC178Q5BJE1 867 aa18.41■□□□□ 0.54
COL16A1-212ENST00000482478 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.41■□□□□ 0.54
COL16A1-212ENST00000482478 RANBP17Q9H2T7 1088 aaKnown RBP18.41■□□□□ 0.54
COL16A1-212ENST00000482478 DNAJC25-GNG10A0A024R161 153 aa18.4■□□□□ 0.54
COL16A1-212ENST00000482478 SLC34A2O95436 690 aa18.4■□□□□ 0.54
COL16A1-212ENST00000482478 ZNF543Q08ER8 600 aa18.4■□□□□ 0.54
COL16A1-212ENST00000482478 LRRC26Q2I0M4 334 aa18.4■□□□□ 0.54
COL16A1-212ENST00000482478 NSMFQ6X4W1 530 aa18.4■□□□□ 0.54
COL16A1-212ENST00000482478 ARMCX2Q7L311 632 aa18.4■□□□□ 0.54
COL16A1-212ENST00000482478 ZNF467Q7Z7K2 595 aaPredicted RBP18.4■□□□□ 0.54
COL16A1-212ENST00000482478 PNMA1Q8ND90 353 aa18.4■□□□□ 0.54
COL16A1-212ENST00000482478 TTC14Q96N46 770 aa18.4■□□□□ 0.54
COL16A1-212ENST00000482478 ZSCAN10Q96SZ4 725 aaPredicted RBP18.4■□□□□ 0.54
COL16A1-212ENST00000482478 TRDNQ13061 729 aa18.39■□□□□ 0.53
COL16A1-212ENST00000482478 GPATCH4Q5T3I0 446 aaKnown RBP18.39■□□□□ 0.53
COL16A1-212ENST00000482478 CENPQQ7L2Z9 268 aaPredicted RBP18.39■□□□□ 0.53
COL16A1-212ENST00000482478 RALYLQ86SE5 291 aaKnown RBP18.39■□□□□ 0.53
COL16A1-212ENST00000482478 DGKHQ86XP1 1220 aa18.39■□□□□ 0.53
COL16A1-212ENST00000482478 ENAHQ8N8S7 591 aaPredicted RBP18.39■□□□□ 0.53
COL16A1-212ENST00000482478 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.39■□□□□ 0.53
COL16A1-212ENST00000482478 RBM27Q9P2N5 1060 aaKnown RBP18.39■□□□□ 0.53
COL16A1-212ENST00000482478 DHX16O60231 1041 aaKnown RBP18.38■□□□□ 0.53
COL16A1-212ENST00000482478 PGK1P00558 417 aa18.38■□□□□ 0.53
COL16A1-212ENST00000482478 ZNF865P0CJ78 1059 aaPredicted RBP18.38■□□□□ 0.53
COL16A1-212ENST00000482478 GOLGA8HP0CJ92 632 aa18.38■□□□□ 0.53
COL16A1-212ENST00000482478 LRRC41Q15345 812 aa18.38■□□□□ 0.53
COL16A1-212ENST00000482478 MUM1L1Q5H9M0 696 aa18.38■□□□□ 0.53
COL16A1-212ENST00000482478 IFIT1BQ5T764 474 aaKnown RBP18.38■□□□□ 0.53
COL16A1-212ENST00000482478 BTNL9Q6UXG8 535 aa18.38■□□□□ 0.53
COL16A1-212ENST00000482478 RNF180Q86T96 592 aa18.38■□□□□ 0.53
COL16A1-212ENST00000482478 FGD4Q96M96 766 aa18.38■□□□□ 0.53
COL16A1-212ENST00000482478 U3KPZ7 1027 aaPredicted RBP18.38■□□□□ 0.53
COL16A1-212ENST00000482478 SGSM2O43147 1006 aa18.37■□□□□ 0.53
COL16A1-212ENST00000482478 SNHG28P0DPA3 235 aa18.37■□□□□ 0.53
COL16A1-212ENST00000482478 CNTN2Q02246 1040 aa18.37■□□□□ 0.53
COL16A1-212ENST00000482478 MAMDC4Q6UXC1 1216 aa18.37■□□□□ 0.53
COL16A1-212ENST00000482478 CCDC144CPQ8IYA2 1237 aa18.37■□□□□ 0.53
COL16A1-212ENST00000482478 FAM184BQ9ULE4 1060 aa18.37■□□□□ 0.53
COL16A1-212ENST00000482478 ATP11BQ9Y2G3 1177 aa18.37■□□□□ 0.53
COL16A1-212ENST00000482478 SYNRGQ9UMZ2 1314 aa18.37■□□□□ 0.53
COL16A1-212ENST00000482478 PTPDC1A2A3K4 754 aa18.36■□□□□ 0.53
COL16A1-212ENST00000482478 SNAI1O95863 264 aaPredicted RBP18.36■□□□□ 0.53
COL16A1-212ENST00000482478 RTP1P59025 263 aa18.36■□□□□ 0.53
COL16A1-212ENST00000482478 PTH1RQ03431 593 aa18.36■□□□□ 0.53
COL16A1-212ENST00000482478 ACVR2BQ13705 512 aa18.36■□□□□ 0.53
COL16A1-212ENST00000482478 USH1GQ495M9 461 aa18.36■□□□□ 0.53
COL16A1-212ENST00000482478 ASPRV1Q53RT3 343 aa18.36■□□□□ 0.53
COL16A1-212ENST00000482478 FAM133AQ8N9E0 248 aa18.36■□□□□ 0.53
COL16A1-212ENST00000482478 FERMT2Q96AC1 680 aa18.36■□□□□ 0.53
COL16A1-212ENST00000482478 PRKAG2Q9UGJ0 569 aa18.36■□□□□ 0.53
COL16A1-212ENST00000482478 TRIOBPQ9H2D6 2365 aa18.35■□□□□ 0.53
COL16A1-212ENST00000482478 MCM3APO60318 1980 aa18.35■□□□□ 0.53
COL16A1-212ENST00000482478 WDR19Q8NEZ3 1342 aa18.35■□□□□ 0.53
COL16A1-212ENST00000482478 ASB14A6NK59 587 aa18.35■□□□□ 0.53
COL16A1-212ENST00000482478 NFIBO00712 420 aa18.35■□□□□ 0.53
COL16A1-212ENST00000482478 CYP21A2P08686 494 aa18.35■□□□□ 0.53
COL16A1-212ENST00000482478 PARP1P09874 1014 aaKnown RBP18.35■□□□□ 0.53
COL16A1-212ENST00000482478 ADCYAP1R1P41586 468 aa18.35■□□□□ 0.53
COL16A1-212ENST00000482478 CDC37Q16543 378 aaPredicted RBP18.35■□□□□ 0.53
COL16A1-212ENST00000482478 SLC30A10Q6XR72 485 aa18.35■□□□□ 0.53
COL16A1-212ENST00000482478 KIAA1211Q6ZU35 1233 aa18.35■□□□□ 0.53
COL16A1-212ENST00000482478 CPVLQ9H3G5 476 aa18.35■□□□□ 0.53
COL16A1-212ENST00000482478 ABHD16BQ9H3Z7 469 aa18.35■□□□□ 0.53
COL16A1-212ENST00000482478 PRDM5Q9NQX1 630 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms