RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 DDX11Q96FC9 970 aa11.49□□□□□ -0.57
TMEM39A-207ENST00000482162 KATNBL1Q9H079 304 aa11.49□□□□□ -0.57
TMEM39A-207ENST00000482162 PRR12Q9ULL5 1215 aa11.49□□□□□ -0.57
TMEM39A-207ENST00000482162 ZMYND8Q9ULU4 1186 aaPredicted RBP11.49□□□□□ -0.57
TMEM39A-207ENST00000482162 HIP1O00291 1037 aa11.48□□□□□ -0.57
TMEM39A-207ENST00000482162 ADAMTS4O75173 837 aa11.48□□□□□ -0.57
TMEM39A-207ENST00000482162 RARBP10826 455 aa11.48□□□□□ -0.57
TMEM39A-207ENST00000482162 ANO1Q5XXA6 986 aa11.48□□□□□ -0.57
TMEM39A-207ENST00000482162 MFSD6Q6ZSS7 791 aa11.48□□□□□ -0.57
TMEM39A-207ENST00000482162 KCTD1Q719H9 257 aa11.48□□□□□ -0.57
TMEM39A-207ENST00000482162 AGBL1Q96MI9 1066 aa11.48□□□□□ -0.57
TMEM39A-207ENST00000482162 DSCC1Q9BVC3 393 aa11.48□□□□□ -0.57
TMEM39A-207ENST00000482162 A1CFQ9NQ94 594 aaKnown RBP11.48□□□□□ -0.57
TMEM39A-207ENST00000482162 PLXNA1Q9UIW2 1896 aa11.48□□□□□ -0.57
TMEM39A-207ENST00000482162 ASTN1O14525 1302 aa11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 SOWAHBA6NEL2 793 aa11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 KBTBD13C9JR72 458 aa11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 DUSP11O75319 330 aaKnown RBP11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 ICAM1P05362 532 aa11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 PDHBP11177 359 aa11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 AKR1A1P14550 325 aa11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 SYN1P17600 705 aa11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 ADCYAP1R1P41586 468 aa11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 HAND2P61296 217 aa11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 ACVR2BQ13705 512 aa11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 LRIT3Q3SXY7 679 aa11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 TTBK2Q6IQ55 1244 aa11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 GPR153Q6NV75 609 aa11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 CWC27Q6UX04 472 aaKnown RBP11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 RASGRP2Q7LDG7 609 aa11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 DGKHQ86XP1 1220 aa11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 ANKRD35Q8N283 1001 aa11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 MORC4Q8TE76 937 aa11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 TSEN34Q9BSV6 310 aaKnown RBP11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 RANBP17Q9H2T7 1088 aaKnown RBP11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 ABHD16BQ9H3Z7 469 aa11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 RNF41Q9H4P4 317 aaPredicted RBP11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 ACAD9Q9H845 621 aa11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 XPNPEP3Q9NQH7 507 aa11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 FAM184BQ9ULE4 1060 aa11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 CNPY2Q9Y2B0 182 aa11.47□□□□□ -0.57
TMEM39A-207ENST00000482162 SOX1O00570 391 aaPredicted RBP11.46□□□□□ -0.57
TMEM39A-207ENST00000482162 ZNF213O14771 459 aa11.46□□□□□ -0.57
TMEM39A-207ENST00000482162 PGK1P00558 417 aa11.46□□□□□ -0.57
TMEM39A-207ENST00000482162 CST5P28325 142 aaPredicted RBP11.46□□□□□ -0.57
TMEM39A-207ENST00000482162 ATN1P54259 1190 aaPredicted RBP11.46□□□□□ -0.57
TMEM39A-207ENST00000482162 RTP1P59025 263 aa11.46□□□□□ -0.57
TMEM39A-207ENST00000482162 CNTN2Q02246 1040 aa11.46□□□□□ -0.57
TMEM39A-207ENST00000482162 ZNF543Q08ER8 600 aa11.46□□□□□ -0.57
TMEM39A-207ENST00000482162 RNF180Q86T96 592 aa11.46□□□□□ -0.57
TMEM39A-207ENST00000482162 TRERF1Q96PN7 1200 aa11.46□□□□□ -0.57
TMEM39A-207ENST00000482162 UPF3AQ9H1J1 476 aaKnown RBP11.46□□□□□ -0.57
TMEM39A-207ENST00000482162 IL25Q9H293 177 aa11.46□□□□□ -0.57
TMEM39A-207ENST00000482162 RNF146Q9NTX7 359 aa11.46□□□□□ -0.57
TMEM39A-207ENST00000482162 CTDP1Q9Y5B0 961 aaPredicted RBP11.46□□□□□ -0.57
TMEM39A-207ENST00000482162 DNAH12Q6ZR08 3092 aa11.45□□□□□ -0.58
TMEM39A-207ENST00000482162 NEDD4P46934 1319 aa11.45□□□□□ -0.58
TMEM39A-207ENST00000482162 POTEB2H3BUK9 544 aa11.45□□□□□ -0.58
TMEM39A-207ENST00000482162 CTAGE5O15320 804 aa11.45□□□□□ -0.58
TMEM39A-207ENST00000482162 ADCY6O43306 1168 aa11.45□□□□□ -0.58
TMEM39A-207ENST00000482162 GSPT1P15170 499 aaKnown RBP11.45□□□□□ -0.58
TMEM39A-207ENST00000482162 MUM1L1Q5H9M0 696 aa11.45□□□□□ -0.58
TMEM39A-207ENST00000482162 RRP12Q5JTH9 1297 aaKnown RBP11.45□□□□□ -0.58
TMEM39A-207ENST00000482162 TTC22Q5TAA0 569 aa11.45□□□□□ -0.58
TMEM39A-207ENST00000482162 SYDE2Q5VT97 1194 aa11.45□□□□□ -0.58
TMEM39A-207ENST00000482162 ARMCX2Q7L311 632 aa11.45□□□□□ -0.58
TMEM39A-207ENST00000482162 ANKRD33Q7Z3H0 272 aa11.45□□□□□ -0.58
TMEM39A-207ENST00000482162 CCDC144CPQ8IYA2 1237 aa11.45□□□□□ -0.58
TMEM39A-207ENST00000482162 TDHQ8IZJ6 230 aa11.45□□□□□ -0.58
TMEM39A-207ENST00000482162 ESR2Q92731 530 aa11.45□□□□□ -0.58
TMEM39A-207ENST00000482162 DIAPH3Q9NSV4 1193 aa11.45□□□□□ -0.58
TMEM39A-207ENST00000482162 CYP39A1Q9NYL5 469 aa11.45□□□□□ -0.58
TMEM39A-207ENST00000482162 ZSWIM5Q9P217 1185 aa11.45□□□□□ -0.58
TMEM39A-207ENST00000482162 PNMA2Q9UL42 364 aa11.45□□□□□ -0.58
TMEM39A-207ENST00000482162 SYNRGQ9UMZ2 1314 aa11.44□□□□□ -0.58
TMEM39A-207ENST00000482162 LOC102724159A0A0B4J2E5 919 aa11.44□□□□□ -0.58
TMEM39A-207ENST00000482162 MOXD2PA6NHM9 499 aa11.44□□□□□ -0.58
TMEM39A-207ENST00000482162 ALAS1P13196 640 aa11.44□□□□□ -0.58
TMEM39A-207ENST00000482162 SLC16A2P36021 539 aa11.44□□□□□ -0.58
TMEM39A-207ENST00000482162 CDK7P50613 346 aa11.44□□□□□ -0.58
TMEM39A-207ENST00000482162 ACLYP53396 1101 aa11.44□□□□□ -0.58
TMEM39A-207ENST00000482162 GJA9P57773 515 aa11.44□□□□□ -0.58
TMEM39A-207ENST00000482162 SNAP25P60880 206 aa11.44□□□□□ -0.58
TMEM39A-207ENST00000482162 TLE2Q04725 743 aa11.44□□□□□ -0.58
TMEM39A-207ENST00000482162 PWP2Q15269 919 aaKnown RBP11.44□□□□□ -0.58
TMEM39A-207ENST00000482162 CCDC144BQ3MJ40 725 aa11.44□□□□□ -0.58
TMEM39A-207ENST00000482162 CCDC178Q5BJE1 867 aa11.44□□□□□ -0.58
TMEM39A-207ENST00000482162 CLEC4DQ8WXI8 215 aa11.44□□□□□ -0.58
TMEM39A-207ENST00000482162 FERMT2Q96AC1 680 aa11.44□□□□□ -0.58
TMEM39A-207ENST00000482162 LENG1Q96BZ8 264 aaPredicted RBP11.44□□□□□ -0.58
TMEM39A-207ENST00000482162 TOX2Q96NM4 488 aa11.44□□□□□ -0.58
TMEM39A-207ENST00000482162 MAF1Q9H063 256 aa11.44□□□□□ -0.58
TMEM39A-207ENST00000482162 TOMM22Q9NS69 142 aa11.44□□□□□ -0.58
TMEM39A-207ENST00000482162 HOMER2Q9NSB8 354 aa11.44□□□□□ -0.58
TMEM39A-207ENST00000482162 CTNNA3Q9UI47 895 aa11.44□□□□□ -0.58
TMEM39A-207ENST00000482162 SZT2Q5T011 3432 aa11.44□□□□□ -0.58
TMEM39A-207ENST00000482162 ELP1O95163 1332 aa11.43□□□□□ -0.58
TMEM39A-207ENST00000482162 WDR19Q8NEZ3 1342 aa11.43□□□□□ -0.58
TMEM39A-207ENST00000482162 A0A1W2PQ45 241 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms