RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 RIPK3Q9Y572 518 aa18.02■□□□□ 0.48
HDAC6-224ENST00000481929 LRRC37A2A6NM11 1700 aa18.01■□□□□ 0.47
HDAC6-224ENST00000481929 CTAGE5O15320 804 aa18.01■□□□□ 0.47
HDAC6-224ENST00000481929 TLL1O43897 1013 aa18.01■□□□□ 0.47
HDAC6-224ENST00000481929 NKX3-2P78367 333 aa18.01■□□□□ 0.47
HDAC6-224ENST00000481929 TMEM67Q5HYA8 995 aa18.01■□□□□ 0.47
HDAC6-224ENST00000481929 CXCL17Q6UXB2 119 aa18.01■□□□□ 0.47
HDAC6-224ENST00000481929 ARMCX2Q7L311 632 aa18.01■□□□□ 0.47
HDAC6-224ENST00000481929 AACSQ86V21 672 aa18.01■□□□□ 0.47
HDAC6-224ENST00000481929 ANKRD35Q8N283 1001 aa18.01■□□□□ 0.47
HDAC6-224ENST00000481929 WNT8AQ9H1J5 351 aa18.01■□□□□ 0.47
HDAC6-224ENST00000481929 CTDP1Q9Y5B0 961 aaPredicted RBP18.01■□□□□ 0.47
HDAC6-224ENST00000481929 MCM3APO60318 1980 aa18■□□□□ 0.47
HDAC6-224ENST00000481929 FAM86C2PA6NEL3 165 aa18■□□□□ 0.47
HDAC6-224ENST00000481929 RFXAPO00287 272 aa18■□□□□ 0.47
HDAC6-224ENST00000481929 CA3P07451 260 aa18■□□□□ 0.47
HDAC6-224ENST00000481929 ITGA7Q13683 1181 aa18■□□□□ 0.47
HDAC6-224ENST00000481929 NOL8Q76FK4 1167 aaKnown RBP18■□□□□ 0.47
HDAC6-224ENST00000481929 HLA-CQ95604 372 aa18■□□□□ 0.47
HDAC6-224ENST00000481929 SEZ6LQ9BYH1 1024 aa18■□□□□ 0.47
HDAC6-224ENST00000481929 ARMT1Q9H993 441 aa18■□□□□ 0.47
HDAC6-224ENST00000481929 ATP8A2Q9NTI2 1148 aa18■□□□□ 0.47
HDAC6-224ENST00000481929 ATP2A1O14983 1001 aa17.99■□□□□ 0.47
HDAC6-224ENST00000481929 C12orf60Q5U649 245 aa17.99■□□□□ 0.47
HDAC6-224ENST00000481929 C16orf86Q6ZW13 317 aa17.99■□□□□ 0.47
HDAC6-224ENST00000481929 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.99■□□□□ 0.47
HDAC6-224ENST00000481929 ALYREFQ86V81 257 aaKnown RBP17.99■□□□□ 0.47
HDAC6-224ENST00000481929 CCDC144CPQ8IYA2 1237 aa17.99■□□□□ 0.47
HDAC6-224ENST00000481929 CPXCR1Q8N123 301 aa17.99■□□□□ 0.47
HDAC6-224ENST00000481929 TMEM57Q8N5G2 664 aa17.99■□□□□ 0.47
HDAC6-224ENST00000481929 FGD4Q96M96 766 aa17.99■□□□□ 0.47
HDAC6-224ENST00000481929 NUP88Q99567 741 aaPredicted RBP17.99■□□□□ 0.47
HDAC6-224ENST00000481929 TRPV6Q9H1D0 765 aa17.99■□□□□ 0.47
HDAC6-224ENST00000481929 C1orf115Q9H7X2 142 aa17.99■□□□□ 0.47
HDAC6-224ENST00000481929 CERS4Q9HA82 394 aa17.99■□□□□ 0.47
HDAC6-224ENST00000481929 C11orf16Q9NQ32 467 aa17.99■□□□□ 0.47
HDAC6-224ENST00000481929 FBXO40Q9UH90 709 aa17.99■□□□□ 0.47
HDAC6-224ENST00000481929 CYP2D7A0A087X1C5 515 aa17.98■□□□□ 0.47
HDAC6-224ENST00000481929 TCRBV5S4A2TA0A5A2 114 aa17.98■□□□□ 0.47
HDAC6-224ENST00000481929 PRKAB2O43741 272 aa17.98■□□□□ 0.47
HDAC6-224ENST00000481929 B4GALT4O60513 344 aa17.98■□□□□ 0.47
HDAC6-224ENST00000481929 ZBED4O75132 1171 aa17.98■□□□□ 0.47
HDAC6-224ENST00000481929 PFKMP08237 780 aa17.98■□□□□ 0.47
HDAC6-224ENST00000481929 TNFAIP2Q03169 654 aa17.98■□□□□ 0.47
HDAC6-224ENST00000481929 PRPF38AQ8NAV1 312 aaKnown RBP17.98■□□□□ 0.47
HDAC6-224ENST00000481929 SCLYQ96I15 445 aa17.98■□□□□ 0.47
HDAC6-224ENST00000481929 KATNBL1Q9H079 304 aa17.98■□□□□ 0.47
HDAC6-224ENST00000481929 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.97■□□□□ 0.47
HDAC6-224ENST00000481929 SMIM22K7EJ46 135 aa17.97■□□□□ 0.47
HDAC6-224ENST00000481929 ZEB2O60315 1214 aa17.97■□□□□ 0.47
HDAC6-224ENST00000481929 FSCN1Q16658 493 aaKnown RBP17.97■□□□□ 0.47
HDAC6-224ENST00000481929 KRT40Q6A162 431 aa17.97■□□□□ 0.47
HDAC6-224ENST00000481929 TLK2Q86UE8 772 aa17.97■□□□□ 0.47
HDAC6-224ENST00000481929 ERC1Q8IUD2 1116 aa17.97■□□□□ 0.47
HDAC6-224ENST00000481929 KHSRPQ92945 711 aaKnown RBP eCLIP17.97■□□□□ 0.47
HDAC6-224ENST00000481929 DDRGK1Q96HY6 314 aa17.97■□□□□ 0.47
HDAC6-224ENST00000481929 AP5M1Q9H0R1 490 aa17.97■□□□□ 0.47
HDAC6-224ENST00000481929 RAVER2Q9HCJ3 691 aaKnown RBP17.97■□□□□ 0.47
HDAC6-224ENST00000481929 BAZ2AQ9UIF9 1905 aaKnown RBP17.97■□□□□ 0.47
HDAC6-224ENST00000481929 ASTN1O14525 1302 aa17.97■□□□□ 0.47
HDAC6-224ENST00000481929 GRIN2DO15399 1336 aa17.97■□□□□ 0.47
HDAC6-224ENST00000481929 EPOPA6NHQ4 379 aa17.96■□□□□ 0.47
HDAC6-224ENST00000481929 USP17L12C9JPN9 530 aa17.96■□□□□ 0.47
HDAC6-224ENST00000481929 USP17L21D6R901 530 aa17.96■□□□□ 0.47
HDAC6-224ENST00000481929 GOLIM4O00461 696 aa17.96■□□□□ 0.47
HDAC6-224ENST00000481929 MBD4O95243 580 aa17.96■□□□□ 0.47
HDAC6-224ENST00000481929 TTLL4Q14679 1199 aa17.96■□□□□ 0.47
HDAC6-224ENST00000481929 CHST13Q8NET6 341 aa17.96■□□□□ 0.47
HDAC6-224ENST00000481929 ARNTL2Q8WYA1 636 aa17.96■□□□□ 0.47
HDAC6-224ENST00000481929 AGBL1Q96MI9 1066 aa17.96■□□□□ 0.47
HDAC6-224ENST00000481929 DNAJC2Q99543 621 aaKnown RBP17.96■□□□□ 0.47
HDAC6-224ENST00000481929 PI4K2BG5E9Z4 385 aa17.95■□□□□ 0.46
HDAC6-224ENST00000481929 ACTN1P12814 892 aa17.95■□□□□ 0.46
HDAC6-224ENST00000481929 KIFC2Q96AC6 838 aa17.95■□□□□ 0.46
HDAC6-224ENST00000481929 VWCEQ96DN2 955 aa17.95■□□□□ 0.46
HDAC6-224ENST00000481929 SLC9A7Q96T83 725 aa17.95■□□□□ 0.46
HDAC6-224ENST00000481929 GNEQ9Y223 722 aaKnown RBP17.95■□□□□ 0.46
HDAC6-224ENST00000481929 F5H6K3 240 aa17.94■□□□□ 0.46
HDAC6-224ENST00000481929 NDUFB10O96000 172 aa17.94■□□□□ 0.46
HDAC6-224ENST00000481929 PSMC6P62333 389 aa17.94■□□□□ 0.46
HDAC6-224ENST00000481929 CNTN2Q02246 1040 aa17.94■□□□□ 0.46
HDAC6-224ENST00000481929 KLRC3Q07444 240 aa17.94■□□□□ 0.46
HDAC6-224ENST00000481929 DEFB128Q7Z7B8 93 aa17.94■□□□□ 0.46
HDAC6-224ENST00000481929 SLC38A10Q9HBR0 1119 aa17.94■□□□□ 0.46
HDAC6-224ENST00000481929 BRWD1Q9NSI6 2320 aa17.93■□□□□ 0.46
HDAC6-224ENST00000481929 DYNC1LI2O43237 492 aaPredicted RBP17.93■□□□□ 0.46
HDAC6-224ENST00000481929 OAZ1P54368 228 aa17.93■□□□□ 0.46
HDAC6-224ENST00000481929 TAP1Q03518 808 aa17.93■□□□□ 0.46
HDAC6-224ENST00000481929 ZKSCAN2Q63HK3 967 aa17.93■□□□□ 0.46
HDAC6-224ENST00000481929 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.93■□□□□ 0.46
HDAC6-224ENST00000481929 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.93■□□□□ 0.46
HDAC6-224ENST00000481929 ALDH8A1Q9H2A2 487 aaPredicted RBP17.93■□□□□ 0.46
HDAC6-224ENST00000481929 HOMER2Q9NSB8 354 aa17.93■□□□□ 0.46
HDAC6-224ENST00000481929 NYAP2Q9P242 653 aa17.93■□□□□ 0.46
HDAC6-224ENST00000481929 EXOC6BQ9Y2D4 811 aa17.93■□□□□ 0.46
HDAC6-224ENST00000481929 ASB14A6NK59 587 aa17.92■□□□□ 0.46
HDAC6-224ENST00000481929 PRR33A8MZF0 331 aa17.92■□□□□ 0.46
HDAC6-224ENST00000481929 KIF28PB7ZC32 967 aa17.92■□□□□ 0.46
HDAC6-224ENST00000481929 SUPT20HL2P0C7V6 817 aa17.92■□□□□ 0.46
HDAC6-224ENST00000481929 ADD2P35612 726 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms