RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 USP17L20D6RJB6 530 aa10.87□□□□□ -0.67
HLA-B-253ENST00000481849 PRKAB2O43741 272 aa10.87□□□□□ -0.67
HLA-B-253ENST00000481849 ZKSCAN1P17029 563 aaPredicted RBP10.87□□□□□ -0.67
HLA-B-253ENST00000481849 VCAM1P19320 739 aa10.87□□□□□ -0.67
HLA-B-253ENST00000481849 MAPK4P31152 587 aa10.87□□□□□ -0.67
HLA-B-253ENST00000481849 USP17L24Q0WX57 530 aa10.87□□□□□ -0.67
HLA-B-253ENST00000481849 SEPT2Q15019 361 aa10.87□□□□□ -0.67
HLA-B-253ENST00000481849 CCL14Q16627 93 aa10.87□□□□□ -0.67
HLA-B-253ENST00000481849 NECAB2Q7Z6G3 386 aa10.87□□□□□ -0.67
HLA-B-253ENST00000481849 PLEKHH3Q7Z736 793 aa10.87□□□□□ -0.67
HLA-B-253ENST00000481849 SLC44A5Q8NCS7 719 aa10.87□□□□□ -0.67
HLA-B-253ENST00000481849 SOCS4Q8WXH5 440 aa10.87□□□□□ -0.67
HLA-B-253ENST00000481849 RPAP3Q9H6T3 665 aaPredicted RBP10.87□□□□□ -0.67
HLA-B-253ENST00000481849 SETXQ7Z333 2677 aaKnown RBP10.87□□□□□ -0.67
HLA-B-253ENST00000481849 SPTBN4Q9H254 2564 aa10.86□□□□□ -0.67
HLA-B-253ENST00000481849 ANKRD11Q6UB99 2663 aaPredicted RBP10.86□□□□□ -0.67
HLA-B-253ENST00000481849 TCRBV5S4A2TA0A5A2 114 aa10.86□□□□□ -0.67
HLA-B-253ENST00000481849 CNMDO75829 334 aa10.86□□□□□ -0.67
HLA-B-253ENST00000481849 MBD4O95243 580 aa10.86□□□□□ -0.67
HLA-B-253ENST00000481849 CHGBP05060 677 aa10.86□□□□□ -0.67
HLA-B-253ENST00000481849 JUNDP17535 347 aa10.86□□□□□ -0.67
HLA-B-253ENST00000481849 GUCY1A2P33402 732 aa10.86□□□□□ -0.67
HLA-B-253ENST00000481849 RGS2P41220 211 aa10.86□□□□□ -0.67
HLA-B-253ENST00000481849 USP14P54578 494 aa10.86□□□□□ -0.67
HLA-B-253ENST00000481849 C20orf194Q5TEA3 1177 aa10.86□□□□□ -0.67
HLA-B-253ENST00000481849 C7orf61Q8IZ16 206 aa10.86□□□□□ -0.67
HLA-B-253ENST00000481849 GTF3C2Q8WUA4 911 aaPredicted RBP10.86□□□□□ -0.67
HLA-B-253ENST00000481849 DYNLL2Q96FJ2 89 aa10.86□□□□□ -0.67
HLA-B-253ENST00000481849 C12orf42Q96LP6 360 aa10.86□□□□□ -0.67
HLA-B-253ENST00000481849 REPIN1Q9BWE0 567 aaKnown RBP10.86□□□□□ -0.67
HLA-B-253ENST00000481849 KIAA1683Q9H0B3 1180 aa10.86□□□□□ -0.67
HLA-B-253ENST00000481849 PAG1Q9NWQ8 432 aa10.86□□□□□ -0.67
HLA-B-253ENST00000481849 RCAN3Q9UKA8 241 aa10.86□□□□□ -0.67
HLA-B-253ENST00000481849 CYP2D7A0A087X1C5 515 aa10.85□□□□□ -0.67
HLA-B-253ENST00000481849 SMARCA5O60264 1052 aaPredicted RBP10.85□□□□□ -0.67
HLA-B-253ENST00000481849 RAB11FIP3O75154 756 aa10.85□□□□□ -0.67
HLA-B-253ENST00000481849 SMPD1P17405 629 aa10.85□□□□□ -0.67
HLA-B-253ENST00000481849 CCND3P30281 292 aaPredicted RBP10.85□□□□□ -0.67
HLA-B-253ENST00000481849 SSTR3P32745 418 aaPredicted RBP10.85□□□□□ -0.67
HLA-B-253ENST00000481849 MRE11P49959 708 aa10.85□□□□□ -0.67
HLA-B-253ENST00000481849 CACNB2Q08289 660 aaPredicted RBP10.85□□□□□ -0.67
HLA-B-253ENST00000481849 TMED8Q6PL24 325 aaPredicted RBP10.85□□□□□ -0.67
HLA-B-253ENST00000481849 CATSPERGQ6ZRH7 1159 aa10.85□□□□□ -0.67
HLA-B-253ENST00000481849 CLEC10AQ8IUN9 316 aa10.85□□□□□ -0.67
HLA-B-253ENST00000481849 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.85□□□□□ -0.67
HLA-B-253ENST00000481849 TANGO6Q9C0B7 1094 aa10.85□□□□□ -0.67
HLA-B-253ENST00000481849 C11orf49Q9H6J7 331 aa10.85□□□□□ -0.67
HLA-B-253ENST00000481849 DCP1AQ9NPI6 582 aaPredicted RBP10.85□□□□□ -0.67
HLA-B-253ENST00000481849 BTBD7Q9P203 1132 aa10.85□□□□□ -0.67
HLA-B-253ENST00000481849 STAP2Q9UGK3 403 aa10.85□□□□□ -0.67
HLA-B-253ENST00000481849 ZMYND8Q9ULU4 1186 aaPredicted RBP10.85□□□□□ -0.67
HLA-B-253ENST00000481849 RABGAP1Q9Y3P9 1069 aa10.85□□□□□ -0.67
HLA-B-253ENST00000481849 PTPRFP10586 1907 aa10.85□□□□□ -0.67
HLA-B-253ENST00000481849 ATAD5Q96QE3 1844 aa10.84□□□□□ -0.67
HLA-B-253ENST00000481849 A0A1W2PRG0 241 aa10.84□□□□□ -0.67
HLA-B-253ENST00000481849 SMIM22K7EJ46 135 aa10.84□□□□□ -0.67
HLA-B-253ENST00000481849 FDX1P10109 184 aa10.84□□□□□ -0.67
HLA-B-253ENST00000481849 SYN1P17600 705 aa10.84□□□□□ -0.67
HLA-B-253ENST00000481849 ADD2P35612 726 aa10.84□□□□□ -0.67
HLA-B-253ENST00000481849 SMCPP49901 116 aaPredicted RBP10.84□□□□□ -0.67
HLA-B-253ENST00000481849 CCNA1P78396 465 aa10.84□□□□□ -0.67
HLA-B-253ENST00000481849 FOXK2Q01167 660 aa10.84□□□□□ -0.67
HLA-B-253ENST00000481849 GABPAQ06546 454 aa10.84□□□□□ -0.67
HLA-B-253ENST00000481849 MAP3K21Q5TCX8 1036 aa10.84□□□□□ -0.67
HLA-B-253ENST00000481849 TREML4Q6UXN2 200 aa10.84□□□□□ -0.67
HLA-B-253ENST00000481849 RETREG3Q86VR2 466 aa10.84□□□□□ -0.67
HLA-B-253ENST00000481849 USP6NLQ92738 828 aa10.84□□□□□ -0.67
HLA-B-253ENST00000481849 APBA2Q99767 749 aa10.84□□□□□ -0.67
HLA-B-253ENST00000481849 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.84□□□□□ -0.67
HLA-B-253ENST00000481849 GMPR2Q9P2T1 348 aaKnown RBP10.84□□□□□ -0.67
HLA-B-253ENST00000481849 CDH23Q9H251 3354 aa10.84□□□□□ -0.67
HLA-B-253ENST00000481849 KMT2BQ9UMN6 2715 aaPredicted RBP10.84□□□□□ -0.67
HLA-B-253ENST00000481849 MGAMO43451 1857 aa10.83□□□□□ -0.68
HLA-B-253ENST00000481849 J3QL48 77 aa10.83□□□□□ -0.68
HLA-B-253ENST00000481849 GLRX3O76003 335 aaKnown RBP10.83□□□□□ -0.68
HLA-B-253ENST00000481849 XRCC5P13010 732 aaKnown RBP10.83□□□□□ -0.68
HLA-B-253ENST00000481849 AKR1B1P15121 316 aa10.83□□□□□ -0.68
HLA-B-253ENST00000481849 ATP5JP18859 108 aa10.83□□□□□ -0.68
HLA-B-253ENST00000481849 TRMT44Q8IYL2 757 aaKnown RBP10.83□□□□□ -0.68
HLA-B-253ENST00000481849 SPICE1Q8N0Z3 855 aa10.83□□□□□ -0.68
HLA-B-253ENST00000481849 GUCD1Q96NT3 240 aa10.83□□□□□ -0.68
HLA-B-253ENST00000481849 HAUS7Q99871 368 aa10.83□□□□□ -0.68
HLA-B-253ENST00000481849 CHMP4BQ9H444 224 aaKnown RBP10.83□□□□□ -0.68
HLA-B-253ENST00000481849 FLRT1Q9NZU1 646 aa10.83□□□□□ -0.68
HLA-B-253ENST00000481849 OGDHLQ9ULD0 1010 aa10.83□□□□□ -0.68
HLA-B-253ENST00000481849 IVNS1ABPQ9Y6Y0 642 aa10.83□□□□□ -0.68
HLA-B-253ENST00000481849 USP17L12C9JPN9 530 aa10.82□□□□□ -0.68
HLA-B-253ENST00000481849 USP17L21D6R901 530 aa10.82□□□□□ -0.68
HLA-B-253ENST00000481849 CAPN2P17655 700 aa10.82□□□□□ -0.68
HLA-B-253ENST00000481849 CNGA1P29973 690 aa10.82□□□□□ -0.68
HLA-B-253ENST00000481849 WNT7BP56706 349 aa10.82□□□□□ -0.68
HLA-B-253ENST00000481849 ATP2B2Q01814 1243 aa10.82□□□□□ -0.68
HLA-B-253ENST00000481849 PLS1Q14651 629 aa10.82□□□□□ -0.68
HLA-B-253ENST00000481849 KIAA1755Q5JYT7 1200 aa10.82□□□□□ -0.68
HLA-B-253ENST00000481849 TMEM179Q6ZVK1 233 aa10.82□□□□□ -0.68
HLA-B-253ENST00000481849 STK11IPQ8N1F8 1099 aa10.82□□□□□ -0.68
HLA-B-253ENST00000481849 LRRCC1Q9C099 1032 aa10.82□□□□□ -0.68
HLA-B-253ENST00000481849 SLC4A4Q9Y6R1 1079 aa10.82□□□□□ -0.68
HLA-B-253ENST00000481849 MYO5AQ9Y4I1 1855 aaKnown RBP10.81□□□□□ -0.68
HLA-B-253ENST00000481849 SLC15A5A6NIM6 579 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms