RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 IFIT3O14879 490 aaKnown RBP12.41□□□□□ -0.42
SSBP1-210ENST00000481508 PRC1O43663 620 aa12.41□□□□□ -0.42
SSBP1-210ENST00000481508 NT5C2P49902 561 aa12.41□□□□□ -0.42
SSBP1-210ENST00000481508 TRDNQ13061 729 aa12.41□□□□□ -0.42
SSBP1-210ENST00000481508 PLS1Q14651 629 aa12.41□□□□□ -0.42
SSBP1-210ENST00000481508 KIF22Q14807 665 aa12.41□□□□□ -0.42
SSBP1-210ENST00000481508 SLC35G1Q2M3R5 365 aa12.41□□□□□ -0.42
SSBP1-210ENST00000481508 TSGA10IPQ3SY00 556 aa12.41□□□□□ -0.42
SSBP1-210ENST00000481508 MAMSTRQ6ZN01 415 aa12.41□□□□□ -0.42
SSBP1-210ENST00000481508 GPR142Q7Z601 462 aa12.41□□□□□ -0.42
SSBP1-210ENST00000481508 USP26Q9BXU7 913 aa12.41□□□□□ -0.42
SSBP1-210ENST00000481508 SPATC1LQ9H0A9 340 aa12.41□□□□□ -0.42
SSBP1-210ENST00000481508 KAT14Q9H8E8 782 aa12.41□□□□□ -0.42
SSBP1-210ENST00000481508 LY9Q9HBG7 655 aa12.41□□□□□ -0.42
SSBP1-210ENST00000481508 GJD2Q9UKL4 321 aa12.41□□□□□ -0.42
SSBP1-210ENST00000481508 PRR12Q9ULL5 1215 aa12.41□□□□□ -0.42
SSBP1-210ENST00000481508 SH2B2O14492 632 aaPredicted RBP12.4□□□□□ -0.42
SSBP1-210ENST00000481508 REC8O95072 547 aa12.4□□□□□ -0.42
SSBP1-210ENST00000481508 ERCC3P19447 782 aa12.4□□□□□ -0.42
SSBP1-210ENST00000481508 FLT3LGP49771 235 aa12.4□□□□□ -0.42
SSBP1-210ENST00000481508 STAT2P52630 851 aa12.4□□□□□ -0.42
SSBP1-210ENST00000481508 ZNF543Q08ER8 600 aa12.4□□□□□ -0.42
SSBP1-210ENST00000481508 TMEM67Q5HYA8 995 aa12.4□□□□□ -0.42
SSBP1-210ENST00000481508 IFIT1BQ5T764 474 aaKnown RBP12.4□□□□□ -0.42
SSBP1-210ENST00000481508 SLC38A10Q9HBR0 1119 aa12.4□□□□□ -0.42
SSBP1-210ENST00000481508 RAVER2Q9HCJ3 691 aaKnown RBP12.4□□□□□ -0.42
SSBP1-210ENST00000481508 RIPK3Q9Y572 518 aa12.4□□□□□ -0.42
SSBP1-210ENST00000481508 MCM3APO60318 1980 aa12.39□□□□□ -0.43
SSBP1-210ENST00000481508 ZNF536O15090 1300 aa12.39□□□□□ -0.43
SSBP1-210ENST00000481508 EXOSC10Q01780 885 aaKnown RBP12.39□□□□□ -0.43
SSBP1-210ENST00000481508 WTAPQ15007 396 aa12.39□□□□□ -0.43
SSBP1-210ENST00000481508 C8orf34Q49A92 452 aa12.39□□□□□ -0.43
SSBP1-210ENST00000481508 CCDC178Q5BJE1 867 aa12.39□□□□□ -0.43
SSBP1-210ENST00000481508 MORN1Q5T089 497 aa12.39□□□□□ -0.43
SSBP1-210ENST00000481508 BTNL9Q6UXG8 535 aa12.39□□□□□ -0.43
SSBP1-210ENST00000481508 PLEKHH3Q7Z736 793 aa12.39□□□□□ -0.43
SSBP1-210ENST00000481508 FAM160B2Q86V87 743 aa12.39□□□□□ -0.43
SSBP1-210ENST00000481508 RAB11FIP4Q86YS3 637 aa12.39□□□□□ -0.43
SSBP1-210ENST00000481508 CPXCR1Q8N123 301 aa12.39□□□□□ -0.43
SSBP1-210ENST00000481508 STAG2Q8N3U4 1231 aa12.39□□□□□ -0.43
SSBP1-210ENST00000481508 MB21D1Q8N884 522 aa12.39□□□□□ -0.43
SSBP1-210ENST00000481508 PRPF38AQ8NAV1 312 aaKnown RBP12.39□□□□□ -0.43
SSBP1-210ENST00000481508 NEK1Q96PY6 1258 aa12.39□□□□□ -0.43
SSBP1-210ENST00000481508 MYL10Q9BUA6 226 aa12.39□□□□□ -0.43
SSBP1-210ENST00000481508 UBA5Q9GZZ9 404 aa12.39□□□□□ -0.43
SSBP1-210ENST00000481508 PLA2G6O60733 806 aa12.38□□□□□ -0.43
SSBP1-210ENST00000481508 ELNP15502 786 aa12.38□□□□□ -0.43
SSBP1-210ENST00000481508 MAPK4P31152 587 aa12.38□□□□□ -0.43
SSBP1-210ENST00000481508 IKQ13123 557 aaPredicted RBP12.38□□□□□ -0.43
SSBP1-210ENST00000481508 IER5LQ5T953 404 aa12.38□□□□□ -0.43
SSBP1-210ENST00000481508 SYDE2Q5VT97 1194 aa12.38□□□□□ -0.43
SSBP1-210ENST00000481508 WDR78Q5VTH9 848 aa12.38□□□□□ -0.43
SSBP1-210ENST00000481508 RNF20Q5VTR2 975 aa12.38□□□□□ -0.43
SSBP1-210ENST00000481508 CCDC174Q6PII3 467 aa12.38□□□□□ -0.43
SSBP1-210ENST00000481508 NCAPG2Q86XI2 1143 aa12.38□□□□□ -0.43
SSBP1-210ENST00000481508 RIOX2Q8IUF8 465 aa12.38□□□□□ -0.43
SSBP1-210ENST00000481508 USP6NLQ92738 828 aa12.38□□□□□ -0.43
SSBP1-210ENST00000481508 AGBL1Q96MI9 1066 aa12.38□□□□□ -0.43
SSBP1-210ENST00000481508 JAKMIP1Q96N16 626 aaKnown RBP12.38□□□□□ -0.43
SSBP1-210ENST00000481508 FRMPD3Q5JV73 1810 aa12.37□□□□□ -0.43
SSBP1-210ENST00000481508 GNRH1P01148 92 aa12.37□□□□□ -0.43
SSBP1-210ENST00000481508 ZKSCAN1P17029 563 aaPredicted RBP12.37□□□□□ -0.43
SSBP1-210ENST00000481508 RXRAP19793 462 aa12.37□□□□□ -0.43
SSBP1-210ENST00000481508 PTPREP23469 700 aa12.37□□□□□ -0.43
SSBP1-210ENST00000481508 MCM5P33992 734 aa12.37□□□□□ -0.43
SSBP1-210ENST00000481508 STAT3P40763 770 aa12.37□□□□□ -0.43
SSBP1-210ENST00000481508 SLC4A3P48751 1232 aa12.37□□□□□ -0.43
SSBP1-210ENST00000481508 CCNA1P78396 465 aa12.37□□□□□ -0.43
SSBP1-210ENST00000481508 TROAPQ12815 778 aa12.37□□□□□ -0.43
SSBP1-210ENST00000481508 TRIM32Q13049 653 aa12.37□□□□□ -0.43
SSBP1-210ENST00000481508 GRB14Q14449 540 aa12.37□□□□□ -0.43
SSBP1-210ENST00000481508 GRM4Q14833 912 aa12.37□□□□□ -0.43
SSBP1-210ENST00000481508 CCL14Q16627 93 aa12.37□□□□□ -0.43
SSBP1-210ENST00000481508 SNRNP48Q6IEG0 339 aaKnown RBP12.37□□□□□ -0.43
SSBP1-210ENST00000481508 NBPF11Q86T75 865 aa12.37□□□□□ -0.43
SSBP1-210ENST00000481508 SHCBP1Q8NEM2 672 aa12.37□□□□□ -0.43
SSBP1-210ENST00000481508 NPLOC4Q8TAT6 608 aa12.37□□□□□ -0.43
SSBP1-210ENST00000481508 RAET1EQ8TD07 263 aa12.37□□□□□ -0.43
SSBP1-210ENST00000481508 CHURC1Q8WUH1 139 aa12.37□□□□□ -0.43
SSBP1-210ENST00000481508 COA7Q96BR5 231 aa12.37□□□□□ -0.43
SSBP1-210ENST00000481508 RANBP17Q9H2T7 1088 aaKnown RBP12.37□□□□□ -0.43
SSBP1-210ENST00000481508 FLRT1Q9NZU1 646 aa12.37□□□□□ -0.43
SSBP1-210ENST00000481508 MAD2L2Q9UI95 211 aa12.37□□□□□ -0.43
SSBP1-210ENST00000481508 CDH23Q9H251 3354 aa12.37□□□□□ -0.43
SSBP1-210ENST00000481508 ERICH2A1L162 156 aa12.36□□□□□ -0.43
SSBP1-210ENST00000481508 ATP2A1O14983 1001 aa12.36□□□□□ -0.43
SSBP1-210ENST00000481508 ADCY3O60266 1144 aa12.36□□□□□ -0.43
SSBP1-210ENST00000481508 COBLO75128 1261 aa12.36□□□□□ -0.43
SSBP1-210ENST00000481508 ZBED4O75132 1171 aa12.36□□□□□ -0.43
SSBP1-210ENST00000481508 CYP2B6P20813 491 aa12.36□□□□□ -0.43
SSBP1-210ENST00000481508 HOXD10P28358 340 aa12.36□□□□□ -0.43
SSBP1-210ENST00000481508 PRMT2P55345 433 aa12.36□□□□□ -0.43
SSBP1-210ENST00000481508 IRF5Q13568 498 aa12.36□□□□□ -0.43
SSBP1-210ENST00000481508 ARHGEF6Q15052 776 aa12.36□□□□□ -0.43
SSBP1-210ENST00000481508 MTFR1Q15390 333 aa12.36□□□□□ -0.43
SSBP1-210ENST00000481508 DHX32Q7L7V1 743 aaKnown RBP12.36□□□□□ -0.43
SSBP1-210ENST00000481508 ZNF654Q8IZM8 581 aa12.36□□□□□ -0.43
SSBP1-210ENST00000481508 DEFB123Q8N688 67 aa12.36□□□□□ -0.43
SSBP1-210ENST00000481508 TRIB2Q92519 343 aa12.36□□□□□ -0.43
SSBP1-210ENST00000481508 TMEM87BQ96K49 555 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms