RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 TAP1Q03518 808 aa11.37□□□□□ -0.59
SMARCE1-210ENST00000481231 TMEM179Q6ZVK1 233 aa11.37□□□□□ -0.59
SMARCE1-210ENST00000481231 FAM178BQ8IXR5 827 aa11.37□□□□□ -0.59
SMARCE1-210ENST00000481231 CLASRPQ8N2M8 674 aaKnown RBP11.37□□□□□ -0.59
SMARCE1-210ENST00000481231 PCSK9Q8NBP7 692 aaKnown RBP11.37□□□□□ -0.59
SMARCE1-210ENST00000481231 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.37□□□□□ -0.59
SMARCE1-210ENST00000481231 DYNLL2Q96FJ2 89 aa11.37□□□□□ -0.59
SMARCE1-210ENST00000481231 NOC4LQ9BVI4 516 aaKnown RBP11.37□□□□□ -0.59
SMARCE1-210ENST00000481231 ARMT1Q9H993 441 aa11.37□□□□□ -0.59
SMARCE1-210ENST00000481231 PRKAB2O43741 272 aa11.36□□□□□ -0.59
SMARCE1-210ENST00000481231 LPXNO60711 386 aa11.36□□□□□ -0.59
SMARCE1-210ENST00000481231 SLC25A27O95847 323 aa11.36□□□□□ -0.59
SMARCE1-210ENST00000481231 IFIT2P09913 472 aaKnown RBP11.36□□□□□ -0.59
SMARCE1-210ENST00000481231 IL9P15248 144 aa11.36□□□□□ -0.59
SMARCE1-210ENST00000481231 BEX3Q00994 111 aa11.36□□□□□ -0.59
SMARCE1-210ENST00000481231 SLFNL1Q499Z3 407 aa11.36□□□□□ -0.59
SMARCE1-210ENST00000481231 GNASQ5JWF2 1037 aa11.36□□□□□ -0.59
SMARCE1-210ENST00000481231 SIAH1Q8IUQ4 282 aa11.36□□□□□ -0.59
SMARCE1-210ENST00000481231 SIRT2Q8IXJ6 389 aa11.36□□□□□ -0.59
SMARCE1-210ENST00000481231 KIF1BPQ96EK5 621 aa11.36□□□□□ -0.59
SMARCE1-210ENST00000481231 BCL11AQ9H165 835 aa11.36□□□□□ -0.59
SMARCE1-210ENST00000481231 TRPV6Q9H1D0 765 aa11.36□□□□□ -0.59
SMARCE1-210ENST00000481231 SWAP70Q9UH65 585 aa11.36□□□□□ -0.59
SMARCE1-210ENST00000481231 DIS3Q9Y2L1 958 aaKnown RBP11.36□□□□□ -0.59
SMARCE1-210ENST00000481231 COL4A4P53420 1690 aaPredicted RBP11.36□□□□□ -0.59
SMARCE1-210ENST00000481231 CFAP54Q96N23 3096 aa11.36□□□□□ -0.59
SMARCE1-210ENST00000481231 CYP2D7A0A087X1C5 515 aa11.35□□□□□ -0.59
SMARCE1-210ENST00000481231 CTAGE5O15320 804 aa11.35□□□□□ -0.59
SMARCE1-210ENST00000481231 B4GALT4O60513 344 aa11.35□□□□□ -0.59
SMARCE1-210ENST00000481231 MBD4O95243 580 aa11.35□□□□□ -0.59
SMARCE1-210ENST00000481231 ALADP13716 330 aa11.35□□□□□ -0.59
SMARCE1-210ENST00000481231 AKR1B1P15121 316 aa11.35□□□□□ -0.59
SMARCE1-210ENST00000481231 GJA9P57773 515 aa11.35□□□□□ -0.59
SMARCE1-210ENST00000481231 ICA1Q05084 483 aa11.35□□□□□ -0.59
SMARCE1-210ENST00000481231 CXCL17Q6UXB2 119 aa11.35□□□□□ -0.59
SMARCE1-210ENST00000481231 HFE2Q6ZVN8 426 aa11.35□□□□□ -0.59
SMARCE1-210ENST00000481231 DEFB128Q7Z7B8 93 aa11.35□□□□□ -0.59
SMARCE1-210ENST00000481231 RIOX2Q8IUF8 465 aa11.35□□□□□ -0.59
SMARCE1-210ENST00000481231 MIER1Q8N108 512 aa11.35□□□□□ -0.59
SMARCE1-210ENST00000481231 GDPD5Q8WTR4 605 aa11.35□□□□□ -0.59
SMARCE1-210ENST00000481231 UPF3AQ9H1J1 476 aaKnown RBP11.35□□□□□ -0.59
SMARCE1-210ENST00000481231 UBE2ZQ9H832 354 aaPredicted RBP11.35□□□□□ -0.59
SMARCE1-210ENST00000481231 FBXO28Q9NVF7 368 aa11.35□□□□□ -0.59
SMARCE1-210ENST00000481231 NAV1Q8NEY1 1877 aa11.34□□□□□ -0.59
SMARCE1-210ENST00000481231 HMMRO75330 724 aa11.34□□□□□ -0.59
SMARCE1-210ENST00000481231 KCNA5P22460 613 aa11.34□□□□□ -0.59
SMARCE1-210ENST00000481231 PTGS1P23219 599 aa11.34□□□□□ -0.59
SMARCE1-210ENST00000481231 ADD2P35612 726 aa11.34□□□□□ -0.59
SMARCE1-210ENST00000481231 ACVR2BQ13705 512 aa11.34□□□□□ -0.59
SMARCE1-210ENST00000481231 CCDC144BQ3MJ40 725 aa11.34□□□□□ -0.59
SMARCE1-210ENST00000481231 RPAP2Q8IXW5 612 aaPredicted RBP11.34□□□□□ -0.59
SMARCE1-210ENST00000481231 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.34□□□□□ -0.59
SMARCE1-210ENST00000481231 AGBL1Q96MI9 1066 aa11.34□□□□□ -0.59
SMARCE1-210ENST00000481231 KCNH6Q9H252 994 aa11.34□□□□□ -0.59
SMARCE1-210ENST00000481231 BOLA2Q9H3K6 86 aa11.34□□□□□ -0.59
SMARCE1-210ENST00000481231 VCPKMTQ9H867 229 aa11.34□□□□□ -0.59
SMARCE1-210ENST00000481231 SPC25Q9HBM1 224 aa11.34□□□□□ -0.59
SMARCE1-210ENST00000481231 ARHGEF10LQ9HCE6 1279 aa11.34□□□□□ -0.59
SMARCE1-210ENST00000481231 ZBTB40Q9NUA8 1239 aa11.34□□□□□ -0.59
SMARCE1-210ENST00000481231 PAG1Q9NWQ8 432 aa11.34□□□□□ -0.59
SMARCE1-210ENST00000481231 TMX2Q9Y320 296 aa11.34□□□□□ -0.59
SMARCE1-210ENST00000481231 GRIN2DO15399 1336 aa11.34□□□□□ -0.59
SMARCE1-210ENST00000481231 ZBED9Q6R2W3 1325 aa11.34□□□□□ -0.59
SMARCE1-210ENST00000481231 DCXO43602 365 aa11.33□□□□□ -0.6
SMARCE1-210ENST00000481231 RAB11FIP3O75154 756 aa11.33□□□□□ -0.6
SMARCE1-210ENST00000481231 CHGBP05060 677 aa11.33□□□□□ -0.6
SMARCE1-210ENST00000481231 STAT3P40763 770 aa11.33□□□□□ -0.6
SMARCE1-210ENST00000481231 CDK8P49336 464 aa11.33□□□□□ -0.6
SMARCE1-210ENST00000481231 PSMC6P62333 389 aa11.33□□□□□ -0.6
SMARCE1-210ENST00000481231 C12orf60Q5U649 245 aa11.33□□□□□ -0.6
SMARCE1-210ENST00000481231 RPUSD2Q8IZ73 545 aaKnown RBP11.33□□□□□ -0.6
SMARCE1-210ENST00000481231 SLC43A3Q8NBI5 491 aa11.33□□□□□ -0.6
SMARCE1-210ENST00000481231 HAUS7Q99871 368 aa11.33□□□□□ -0.6
SMARCE1-210ENST00000481231 SH2D4AQ9H788 454 aa11.33□□□□□ -0.6
SMARCE1-210ENST00000481231 ATP8A2Q9NTI2 1148 aa11.33□□□□□ -0.6
SMARCE1-210ENST00000481231 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.33□□□□□ -0.6
SMARCE1-210ENST00000481231 ZNF214Q9UL59 606 aaPredicted RBP11.33□□□□□ -0.6
SMARCE1-210ENST00000481231 COG6Q9Y2V7 657 aa11.33□□□□□ -0.6
SMARCE1-210ENST00000481231 BRWD1Q9NSI6 2320 aa11.32□□□□□ -0.6
SMARCE1-210ENST00000481231 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.32□□□□□ -0.6
SMARCE1-210ENST00000481231 LCHNA4D1U4 455 aa11.32□□□□□ -0.6
SMARCE1-210ENST00000481231 USP17L12C9JPN9 530 aa11.32□□□□□ -0.6
SMARCE1-210ENST00000481231 USP17L21D6R901 530 aa11.32□□□□□ -0.6
SMARCE1-210ENST00000481231 VWA5AO00534 786 aa11.32□□□□□ -0.6
SMARCE1-210ENST00000481231 WDR46O15213 610 aaKnown RBP11.32□□□□□ -0.6
SMARCE1-210ENST00000481231 ST18O60284 1047 aa11.32□□□□□ -0.6
SMARCE1-210ENST00000481231 MS4A1P11836 297 aa11.32□□□□□ -0.6
SMARCE1-210ENST00000481231 ATP5JP18859 108 aa11.32□□□□□ -0.6
SMARCE1-210ENST00000481231 ITGA7Q13683 1181 aa11.32□□□□□ -0.6
SMARCE1-210ENST00000481231 LEXMQ3ZCV2 418 aa11.32□□□□□ -0.6
SMARCE1-210ENST00000481231 PTCRAQ6ISU1 281 aaPredicted RBP11.32□□□□□ -0.6
SMARCE1-210ENST00000481231 MAMDC4Q6UXC1 1216 aa11.32□□□□□ -0.6
SMARCE1-210ENST00000481231 MSL3Q8N5Y2 521 aaKnown RBP11.32□□□□□ -0.6
SMARCE1-210ENST00000481231 PRSS33Q8NF86 280 aa11.32□□□□□ -0.6
SMARCE1-210ENST00000481231 CCDC17Q96LX7 622 aa11.32□□□□□ -0.6
SMARCE1-210ENST00000481231 ASTN1O14525 1302 aa11.32□□□□□ -0.6
SMARCE1-210ENST00000481231 ZNF536O15090 1300 aa11.32□□□□□ -0.6
SMARCE1-210ENST00000481231 ZNFX1Q9P2E3 1918 aaKnown RBP11.31□□□□□ -0.6
SMARCE1-210ENST00000481231 COL11A1P12107 1806 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-210ENST00000481231 PARP14Q460N5 1801 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms