RNA–Protein interactions for RNA: ENST00000480598.1

LIMS4-202, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-202ENST00000480598 DCAF4Q8WV16 495 aa17.57■□□□□ 0.4
LIMS4-202ENST00000480598 LENG1Q96BZ8 264 aaPredicted RBP17.57■□□□□ 0.4
LIMS4-202ENST00000480598 FGD4Q96M96 766 aa17.57■□□□□ 0.4
LIMS4-202ENST00000480598 TCP11L1Q9NUJ3 509 aa17.57■□□□□ 0.4
LIMS4-202ENST00000480598 FBXO40Q9UH90 709 aa17.57■□□□□ 0.4
LIMS4-202ENST00000480598 NRBP1Q9UHY1 535 aa17.57■□□□□ 0.4
LIMS4-202ENST00000480598 FRMPD2Q68DX3 1309 aaPredicted RBP17.56■□□□□ 0.4
LIMS4-202ENST00000480598 ZNF213O14771 459 aa17.56■□□□□ 0.4
LIMS4-202ENST00000480598 PCP11498 1178 aaKnown RBP17.56■□□□□ 0.4
LIMS4-202ENST00000480598 SLC16A2P36021 539 aa17.56■□□□□ 0.4
LIMS4-202ENST00000480598 ARRDC4Q8NCT1 418 aa17.56■□□□□ 0.4
LIMS4-202ENST00000480598 ZKSCAN3Q9BRR0 538 aa17.56■□□□□ 0.4
LIMS4-202ENST00000480598 RNF41Q9H4P4 317 aaPredicted RBP17.56■□□□□ 0.4
LIMS4-202ENST00000480598 RNF146Q9NTX7 359 aa17.56■□□□□ 0.4
LIMS4-202ENST00000480598 MCM3APO60318 1980 aa17.55■□□□□ 0.4
LIMS4-202ENST00000480598 KBTBD13C9JR72 458 aa17.55■□□□□ 0.4
LIMS4-202ENST00000480598 SNAI1O95863 264 aaPredicted RBP17.55■□□□□ 0.4
LIMS4-202ENST00000480598 ALAS1P13196 640 aa17.55■□□□□ 0.4
LIMS4-202ENST00000480598 LRRC41Q15345 812 aa17.55■□□□□ 0.4
LIMS4-202ENST00000480598 DSCC1Q9BVC3 393 aa17.55■□□□□ 0.4
LIMS4-202ENST00000480598 ACAD9Q9H845 621 aa17.55■□□□□ 0.4
LIMS4-202ENST00000480598 GPCPD1Q9NPB8 672 aa17.55■□□□□ 0.4
LIMS4-202ENST00000480598 CNPY2Q9Y2B0 182 aa17.55■□□□□ 0.4
LIMS4-202ENST00000480598 SYNGAP1Q96PV0 1343 aa17.54■□□□□ 0.4
LIMS4-202ENST00000480598 PGK1P00558 417 aa17.54■□□□□ 0.4
LIMS4-202ENST00000480598 RARBP10826 455 aa17.54■□□□□ 0.4
LIMS4-202ENST00000480598 PDHBP11177 359 aa17.54■□□□□ 0.4
LIMS4-202ENST00000480598 MAMDC4Q6UXC1 1216 aa17.54■□□□□ 0.4
LIMS4-202ENST00000480598 MSL3Q8N5Y2 521 aaKnown RBP17.54■□□□□ 0.4
LIMS4-202ENST00000480598 ESR2Q92731 530 aa17.54■□□□□ 0.4
LIMS4-202ENST00000480598 TRERF1Q96PN7 1200 aa17.54■□□□□ 0.4
LIMS4-202ENST00000480598 GDF15Q99988 308 aa17.54■□□□□ 0.4
LIMS4-202ENST00000480598 A1CFQ9NQ94 594 aaKnown RBP17.54■□□□□ 0.4
LIMS4-202ENST00000480598 XPNPEP3Q9NQH7 507 aa17.54■□□□□ 0.4
LIMS4-202ENST00000480598 ZHX1Q9UKY1 873 aaPredicted RBP17.54■□□□□ 0.4
LIMS4-202ENST00000480598 B4E1Z4 1266 aa17.53■□□□□ 0.4
LIMS4-202ENST00000480598 AKR1A1P14550 325 aa17.53■□□□□ 0.4
LIMS4-202ENST00000480598 MAGEA10P43363 369 aaPredicted RBP17.53■□□□□ 0.4
LIMS4-202ENST00000480598 RTP1P59025 263 aa17.53■□□□□ 0.4
LIMS4-202ENST00000480598 CNTN2Q02246 1040 aa17.53■□□□□ 0.4
LIMS4-202ENST00000480598 TKFCQ3LXA3 575 aa17.53■□□□□ 0.4
LIMS4-202ENST00000480598 MUM1L1Q5H9M0 696 aa17.53■□□□□ 0.4
LIMS4-202ENST00000480598 SYDE2Q5VT97 1194 aa17.53■□□□□ 0.4
LIMS4-202ENST00000480598 BTNL9Q6UXG8 535 aa17.53■□□□□ 0.4
LIMS4-202ENST00000480598 ZNF467Q7Z7K2 595 aaPredicted RBP17.53■□□□□ 0.4
LIMS4-202ENST00000480598 FERMT2Q96AC1 680 aa17.53■□□□□ 0.4
LIMS4-202ENST00000480598 TTC14Q96N46 770 aa17.53■□□□□ 0.4
LIMS4-202ENST00000480598 RANBP17Q9H2T7 1088 aaKnown RBP17.53■□□□□ 0.4
LIMS4-202ENST00000480598 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.53■□□□□ 0.4
LIMS4-202ENST00000480598 CCPG1Q9ULG6 757 aa17.53■□□□□ 0.4
LIMS4-202ENST00000480598 SZT2Q5T011 3432 aa17.53■□□□□ 0.4
LIMS4-202ENST00000480598 LAMA3Q16787 3333 aa17.52■□□□□ 0.4
LIMS4-202ENST00000480598 POTEB2H3BUK9 544 aa17.52■□□□□ 0.4
LIMS4-202ENST00000480598 KDM4AO75164 1064 aa17.52■□□□□ 0.4
LIMS4-202ENST00000480598 ADCYAP1R1P41586 468 aa17.52■□□□□ 0.4
LIMS4-202ENST00000480598 IMMTQ16891 758 aaKnown RBP17.52■□□□□ 0.4
LIMS4-202ENST00000480598 ARMCX2Q7L311 632 aa17.52■□□□□ 0.4
LIMS4-202ENST00000480598 FAM133AQ8N9E0 248 aa17.52■□□□□ 0.4
LIMS4-202ENST00000480598 SOWAHBA6NEL2 793 aa17.51■□□□□ 0.39
LIMS4-202ENST00000480598 ICAM1P05362 532 aa17.51■□□□□ 0.39
LIMS4-202ENST00000480598 ZNF543Q08ER8 600 aa17.51■□□□□ 0.39
LIMS4-202ENST00000480598 ACVR2BQ13705 512 aa17.51■□□□□ 0.39
LIMS4-202ENST00000480598 SLC39A5Q6ZMH5 540 aa17.51■□□□□ 0.39
LIMS4-202ENST00000480598 CCDC144CPQ8IYA2 1237 aa17.51■□□□□ 0.39
LIMS4-202ENST00000480598 FAM184BQ9ULE4 1060 aa17.51■□□□□ 0.39
LIMS4-202ENST00000480598 ATP11BQ9Y2G3 1177 aa17.51■□□□□ 0.39
LIMS4-202ENST00000480598 DDX49Q9Y6V7 483 aaKnown RBP17.51■□□□□ 0.39
LIMS4-202ENST00000480598 ADCY6O43306 1168 aa17.5■□□□□ 0.39
LIMS4-202ENST00000480598 ADAMTS4O75173 837 aa17.5■□□□□ 0.39
LIMS4-202ENST00000480598 SNHG28P0DPA3 235 aa17.5■□□□□ 0.39
LIMS4-202ENST00000480598 BMP8BP34820 402 aa17.5■□□□□ 0.39
LIMS4-202ENST00000480598 MDM2Q00987 491 aaPredicted RBP17.5■□□□□ 0.39
LIMS4-202ENST00000480598 RNF180Q86T96 592 aa17.5■□□□□ 0.39
LIMS4-202ENST00000480598 IQCA1Q86XH1 822 aa17.5■□□□□ 0.39
LIMS4-202ENST00000480598 CTNNA3Q9UI47 895 aa17.5■□□□□ 0.39
LIMS4-202ENST00000480598 PHF24Q9UPV7 400 aa17.5■□□□□ 0.39
LIMS4-202ENST00000480598 ASTN1O14525 1302 aa17.49■□□□□ 0.39
LIMS4-202ENST00000480598 RAD50Q92878 1312 aa17.49■□□□□ 0.39
LIMS4-202ENST00000480598 SYNRGQ9UMZ2 1314 aa17.49■□□□□ 0.39
LIMS4-202ENST00000480598 LCTP09848 1927 aa17.49■□□□□ 0.39
LIMS4-202ENST00000480598 A0A1W2PPC1 479 aa17.49■□□□□ 0.39
LIMS4-202ENST00000480598 GOLGA8HP0CJ92 632 aa17.49■□□□□ 0.39
LIMS4-202ENST00000480598 CHMLP26374 656 aa17.49■□□□□ 0.39
LIMS4-202ENST00000480598 IRX5P78411 483 aaPredicted RBP17.49■□□□□ 0.39
LIMS4-202ENST00000480598 TRIM60Q495X7 471 aa17.49■□□□□ 0.39
LIMS4-202ENST00000480598 NSMFQ6X4W1 530 aa17.49■□□□□ 0.39
LIMS4-202ENST00000480598 DGKHQ86XP1 1220 aa17.49■□□□□ 0.39
LIMS4-202ENST00000480598 PURBQ96QR8 312 aaKnown RBP17.49■□□□□ 0.39
LIMS4-202ENST00000480598 KATNBL1Q9H079 304 aa17.49■□□□□ 0.39
LIMS4-202ENST00000480598 CPVLQ9H3G5 476 aa17.49■□□□□ 0.39
LIMS4-202ENST00000480598 ABHD16BQ9H3Z7 469 aa17.49■□□□□ 0.39
LIMS4-202ENST00000480598 CYP39A1Q9NYL5 469 aa17.49■□□□□ 0.39
LIMS4-202ENST00000480598 ZSWIM5Q9P217 1185 aa17.49■□□□□ 0.39
LIMS4-202ENST00000480598 MYADML2A6NDP7 307 aa17.48■□□□□ 0.39
LIMS4-202ENST00000480598 NFIBO00712 420 aa17.48■□□□□ 0.39
LIMS4-202ENST00000480598 PTH1RQ03431 593 aa17.48■□□□□ 0.39
LIMS4-202ENST00000480598 SNX17Q15036 470 aa17.48■□□□□ 0.39
LIMS4-202ENST00000480598 CCDC144BQ3MJ40 725 aa17.48■□□□□ 0.39
LIMS4-202ENST00000480598 ENAHQ8N8S7 591 aaPredicted RBP17.48■□□□□ 0.39
LIMS4-202ENST00000480598 PNMA1Q8ND90 353 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms