RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 YBX2Q9Y2T7 364 aaKnown RBP13.57□□□□□ -0.24
TTC28-206ENST00000480563 CTDP1Q9Y5B0 961 aaPredicted RBP13.57□□□□□ -0.24
TTC28-206ENST00000480563 COL11A1P12107 1806 aaPredicted RBP13.57□□□□□ -0.24
TTC28-206ENST00000480563 PARP14Q460N5 1801 aa13.57□□□□□ -0.24
TTC28-206ENST00000480563 PLXNA1Q9UIW2 1896 aa13.57□□□□□ -0.24
TTC28-206ENST00000480563 NDUFB10O96000 172 aa13.56□□□□□ -0.24
TTC28-206ENST00000480563 CHGBP05060 677 aa13.56□□□□□ -0.24
TTC28-206ENST00000480563 NKX3-2P78367 333 aa13.56□□□□□ -0.24
TTC28-206ENST00000480563 BEX3Q00994 111 aa13.56□□□□□ -0.24
TTC28-206ENST00000480563 ARMCX2Q7L311 632 aa13.56□□□□□ -0.24
TTC28-206ENST00000480563 OTOP2Q7RTS6 562 aa13.56□□□□□ -0.24
TTC28-206ENST00000480563 KIFC2Q96AC6 838 aa13.56□□□□□ -0.24
TTC28-206ENST00000480563 FGD4Q96M96 766 aa13.56□□□□□ -0.24
TTC28-206ENST00000480563 HIPK3Q9H422 1215 aa13.56□□□□□ -0.24
TTC28-206ENST00000480563 RAVER2Q9HCJ3 691 aaKnown RBP13.56□□□□□ -0.24
TTC28-206ENST00000480563 NYAP2Q9P242 653 aa13.56□□□□□ -0.24
TTC28-206ENST00000480563 MYO9BQ13459 2157 aa13.56□□□□□ -0.24
TTC28-206ENST00000480563 BMP1P13497 986 aa13.55□□□□□ -0.24
TTC28-206ENST00000480563 CCL23P55773 120 aa13.55□□□□□ -0.24
TTC28-206ENST00000480563 UBE3CQ15386 1083 aa13.55□□□□□ -0.24
TTC28-206ENST00000480563 CXCL17Q6UXB2 119 aa13.55□□□□□ -0.24
TTC28-206ENST00000480563 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.55□□□□□ -0.24
TTC28-206ENST00000480563 CCDC144CPQ8IYA2 1237 aa13.55□□□□□ -0.24
TTC28-206ENST00000480563 SLC43A3Q8NBI5 491 aa13.55□□□□□ -0.24
TTC28-206ENST00000480563 NECAB3Q96P71 396 aaPredicted RBP13.55□□□□□ -0.24
TTC28-206ENST00000480563 KATNBL1Q9H079 304 aa13.55□□□□□ -0.24
TTC28-206ENST00000480563 MKNK2Q9HBH9 465 aa13.55□□□□□ -0.24
TTC28-206ENST00000480563 SLC38A10Q9HBR0 1119 aa13.55□□□□□ -0.24
TTC28-206ENST00000480563 FBXO40Q9UH90 709 aa13.55□□□□□ -0.24
TTC28-206ENST00000480563 UMODL1Q5DID0 1318 aa13.55□□□□□ -0.24
TTC28-206ENST00000480563 ZBED9Q6R2W3 1325 aa13.55□□□□□ -0.24
TTC28-206ENST00000480563 ATP5JP18859 108 aa13.54□□□□□ -0.24
TTC28-206ENST00000480563 RASA1P20936 1047 aa13.54□□□□□ -0.24
TTC28-206ENST00000480563 RABGGTBP53611 331 aa13.54□□□□□ -0.24
TTC28-206ENST00000480563 TNFAIP2Q03169 654 aa13.54□□□□□ -0.24
TTC28-206ENST00000480563 NOL8Q76FK4 1167 aaKnown RBP13.54□□□□□ -0.24
TTC28-206ENST00000480563 STK11IPQ8N1F8 1099 aa13.54□□□□□ -0.24
TTC28-206ENST00000480563 MICALL1Q8N3F8 863 aa13.54□□□□□ -0.24
TTC28-206ENST00000480563 CHST13Q8NET6 341 aa13.54□□□□□ -0.24
TTC28-206ENST00000480563 HAUS7Q99871 368 aa13.54□□□□□ -0.24
TTC28-206ENST00000480563 C1QTNF1Q9BXJ1 281 aa13.54□□□□□ -0.24
TTC28-206ENST00000480563 PUS7LQ9H0K6 701 aaKnown RBP13.54□□□□□ -0.24
TTC28-206ENST00000480563 ARPP21Q9UBL0 812 aaPredicted RBP13.54□□□□□ -0.24
TTC28-206ENST00000480563 CLIP2Q9UDT6 1046 aa13.54□□□□□ -0.24
TTC28-206ENST00000480563 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.53□□□□□ -0.24
TTC28-206ENST00000480563 CCER2I3L3R5 266 aa13.53□□□□□ -0.24
TTC28-206ENST00000480563 CABYRO75952 493 aa13.53□□□□□ -0.24
TTC28-206ENST00000480563 OAZ1P54368 228 aa13.53□□□□□ -0.24
TTC28-206ENST00000480563 CNTN2Q02246 1040 aa13.53□□□□□ -0.24
TTC28-206ENST00000480563 TFF2Q03403 129 aa13.53□□□□□ -0.24
TTC28-206ENST00000480563 ITGA7Q13683 1181 aa13.53□□□□□ -0.24
TTC28-206ENST00000480563 AAK1Q2M2I8 961 aa13.53□□□□□ -0.24
TTC28-206ENST00000480563 PPP2R2DQ66LE6 453 aa13.53□□□□□ -0.24
TTC28-206ENST00000480563 RPUSD2Q8IZ73 545 aaKnown RBP13.53□□□□□ -0.24
TTC28-206ENST00000480563 NOC4LQ9BVI4 516 aaKnown RBP13.53□□□□□ -0.24
TTC28-206ENST00000480563 TRPV6Q9H1D0 765 aa13.53□□□□□ -0.24
TTC28-206ENST00000480563 FEM1BQ9UK73 627 aa13.53□□□□□ -0.24
TTC28-206ENST00000480563 PCDHA11Q9Y5I1 949 aa13.53□□□□□ -0.24
TTC28-206ENST00000480563 SLC4A7Q9Y6M7 1214 aa13.53□□□□□ -0.24
TTC28-206ENST00000480563 ASTN1O14525 1302 aa13.53□□□□□ -0.24
TTC28-206ENST00000480563 GRIN2DO15399 1336 aa13.53□□□□□ -0.24
TTC28-206ENST00000480563 MYH8P13535 1937 aa13.52□□□□□ -0.24
TTC28-206ENST00000480563 MINDY4BA8MYZ0 360 aa13.52□□□□□ -0.25
TTC28-206ENST00000480563 MYOGP15173 224 aa13.52□□□□□ -0.25
TTC28-206ENST00000480563 SBK1Q52WX2 424 aa13.52□□□□□ -0.25
TTC28-206ENST00000480563 ZSCAN25Q6NSZ9 544 aa13.52□□□□□ -0.25
TTC28-206ENST00000480563 FAM133AQ8N9E0 248 aa13.52□□□□□ -0.25
TTC28-206ENST00000480563 PANK1Q8TE04 598 aa13.52□□□□□ -0.25
TTC28-206ENST00000480563 AP5M1Q9H0R1 490 aa13.52□□□□□ -0.25
TTC28-206ENST00000480563 WNT8AQ9H1J5 351 aa13.52□□□□□ -0.25
TTC28-206ENST00000480563 HOMER2Q9NSB8 354 aa13.52□□□□□ -0.25
TTC28-206ENST00000480563 GNEQ9Y223 722 aaKnown RBP13.52□□□□□ -0.25
TTC28-206ENST00000480563 BAZ2AQ9UIF9 1905 aaKnown RBP13.52□□□□□ -0.25
TTC28-206ENST00000480563 IGKV6D-41A0A0C4DH26 115 aa13.51□□□□□ -0.25
TTC28-206ENST00000480563 SOWAHBA6NEL2 793 aa13.51□□□□□ -0.25
TTC28-206ENST00000480563 ZBBXA8MT70 800 aa13.51□□□□□ -0.25
TTC28-206ENST00000480563 DYNC1LI2O43237 492 aaPredicted RBP13.51□□□□□ -0.25
TTC28-206ENST00000480563 B4GALT4O60513 344 aa13.51□□□□□ -0.25
TTC28-206ENST00000480563 RAB11FIP3O75154 756 aa13.51□□□□□ -0.25
TTC28-206ENST00000480563 SKIV2LQ15477 1246 aaKnown RBP13.51□□□□□ -0.25
TTC28-206ENST00000480563 FSCN1Q16658 493 aaKnown RBP13.51□□□□□ -0.25
TTC28-206ENST00000480563 TLK2Q86UE8 772 aa13.51□□□□□ -0.25
TTC28-206ENST00000480563 RPAP2Q8IXW5 612 aaPredicted RBP13.51□□□□□ -0.25
TTC28-206ENST00000480563 MKL1Q969V6 931 aa13.51□□□□□ -0.25
TTC28-206ENST00000480563 STRBPQ96SI9 672 aaKnown RBP13.51□□□□□ -0.25
TTC28-206ENST00000480563 SEZ6LQ9BYH1 1024 aa13.51□□□□□ -0.25
TTC28-206ENST00000480563 ASB14A6NK59 587 aa13.5□□□□□ -0.25
TTC28-206ENST00000480563 GSG1L2A8MUP6 293 aa13.5□□□□□ -0.25
TTC28-206ENST00000480563 ERC2O15083 957 aa13.5□□□□□ -0.25
TTC28-206ENST00000480563 ZEB2O60315 1214 aa13.5□□□□□ -0.25
TTC28-206ENST00000480563 HMMRO75330 724 aa13.5□□□□□ -0.25
TTC28-206ENST00000480563 ATP2A2P16615 1042 aaKnown RBP13.5□□□□□ -0.25
TTC28-206ENST00000480563 SMPD1P17405 629 aa13.5□□□□□ -0.25
TTC28-206ENST00000480563 PTGS1P23219 599 aa13.5□□□□□ -0.25
TTC28-206ENST00000480563 KCNQ1P51787 676 aa13.5□□□□□ -0.25
TTC28-206ENST00000480563 PSMC6P62333 389 aa13.5□□□□□ -0.25
TTC28-206ENST00000480563 SIRT2Q8IXJ6 389 aa13.5□□□□□ -0.25
TTC28-206ENST00000480563 ZNF444Q8N0Y2 327 aaPredicted RBP13.5□□□□□ -0.25
TTC28-206ENST00000480563 VWCEQ96DN2 955 aa13.5□□□□□ -0.25
TTC28-206ENST00000480563 SCLYQ96I15 445 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms