RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 HOMER2Q9NSB8 354 aa17.66■□□□□ 0.42
TDP2-205ENST00000480495 RNF146Q9NTX7 359 aa17.66■□□□□ 0.42
TDP2-205ENST00000480495 ZNFX1Q9P2E3 1918 aaKnown RBP17.66■□□□□ 0.42
TDP2-205ENST00000480495 KDM4AO75164 1064 aa17.65■□□□□ 0.42
TDP2-205ENST00000480495 SNHG28P0DPA3 235 aa17.65■□□□□ 0.42
TDP2-205ENST00000480495 PDHBP11177 359 aa17.65■□□□□ 0.42
TDP2-205ENST00000480495 SYDE2Q5VT97 1194 aa17.65■□□□□ 0.42
TDP2-205ENST00000480495 CCDC174Q6PII3 467 aa17.65■□□□□ 0.42
TDP2-205ENST00000480495 C7orf61Q8IZ16 206 aa17.65■□□□□ 0.42
TDP2-205ENST00000480495 TRERF1Q96PN7 1200 aa17.65■□□□□ 0.42
TDP2-205ENST00000480495 RANBP17Q9H2T7 1088 aaKnown RBP17.65■□□□□ 0.42
TDP2-205ENST00000480495 CEP290O15078 2479 aa17.65■□□□□ 0.42
TDP2-205ENST00000480495 LAMA4Q16363 1823 aa17.64■□□□□ 0.41
TDP2-205ENST00000480495 B4E1Z4 1266 aa17.64■□□□□ 0.41
TDP2-205ENST00000480495 KBTBD13C9JR72 458 aa17.64■□□□□ 0.41
TDP2-205ENST00000480495 ICAM1P05362 532 aa17.64■□□□□ 0.41
TDP2-205ENST00000480495 ZNF865P0CJ78 1059 aaPredicted RBP17.64■□□□□ 0.41
TDP2-205ENST00000480495 RARBP10826 455 aa17.64■□□□□ 0.41
TDP2-205ENST00000480495 ALAS1P13196 640 aa17.64■□□□□ 0.41
TDP2-205ENST00000480495 AKR1A1P14550 325 aa17.64■□□□□ 0.41
TDP2-205ENST00000480495 ZNF543Q08ER8 600 aa17.64■□□□□ 0.41
TDP2-205ENST00000480495 GPATCH4Q5T3I0 446 aaKnown RBP17.64■□□□□ 0.41
TDP2-205ENST00000480495 ANO1Q5XXA6 986 aa17.64■□□□□ 0.41
TDP2-205ENST00000480495 TTBK2Q6IQ55 1244 aa17.64■□□□□ 0.41
TDP2-205ENST00000480495 CHRDL2Q6WN34 429 aa17.64■□□□□ 0.41
TDP2-205ENST00000480495 ANKS1AQ92625 1134 aa17.64■□□□□ 0.41
TDP2-205ENST00000480495 ZKSCAN3Q9BRR0 538 aa17.64■□□□□ 0.41
TDP2-205ENST00000480495 SENP6Q9GZR1 1112 aaPredicted RBP17.64■□□□□ 0.41
TDP2-205ENST00000480495 GPCPD1Q9NPB8 672 aa17.64■□□□□ 0.41
TDP2-205ENST00000480495 PNMA2Q9UL42 364 aa17.64■□□□□ 0.41
TDP2-205ENST00000480495 CCPG1Q9ULG6 757 aa17.64■□□□□ 0.41
TDP2-205ENST00000480495 FRMPD2Q68DX3 1309 aaPredicted RBP17.64■□□□□ 0.41
TDP2-205ENST00000480495 FRMPD3Q5JV73 1810 aa17.63■□□□□ 0.41
TDP2-205ENST00000480495 POTEB2H3BUK9 544 aa17.63■□□□□ 0.41
TDP2-205ENST00000480495 SNAI1O95863 264 aaPredicted RBP17.63■□□□□ 0.41
TDP2-205ENST00000480495 TAL1P17542 331 aaPredicted RBP17.63■□□□□ 0.41
TDP2-205ENST00000480495 SLC16A2P36021 539 aa17.63■□□□□ 0.41
TDP2-205ENST00000480495 SNAP25P60880 206 aa17.63■□□□□ 0.41
TDP2-205ENST00000480495 LRRC26Q2I0M4 334 aa17.63■□□□□ 0.41
TDP2-205ENST00000480495 GJC2Q5T442 439 aaPredicted RBP17.63■□□□□ 0.41
TDP2-205ENST00000480495 ZSCAN10Q96SZ4 725 aaPredicted RBP17.63■□□□□ 0.41
TDP2-205ENST00000480495 A1CFQ9NQ94 594 aaKnown RBP17.63■□□□□ 0.41
TDP2-205ENST00000480495 ZSWIM5Q9P217 1185 aa17.63■□□□□ 0.41
TDP2-205ENST00000480495 PLXNA1Q9UIW2 1896 aa17.63■□□□□ 0.41
TDP2-205ENST00000480495 SGSM2O43147 1006 aa17.62■□□□□ 0.41
TDP2-205ENST00000480495 LRRC41Q15345 812 aa17.62■□□□□ 0.41
TDP2-205ENST00000480495 FAM133AQ8N9E0 248 aa17.62■□□□□ 0.41
TDP2-205ENST00000480495 PNMA1Q8ND90 353 aa17.62■□□□□ 0.41
TDP2-205ENST00000480495 FGD4Q96M96 766 aa17.62■□□□□ 0.41
TDP2-205ENST00000480495 UBAC1Q9BSL1 405 aa17.62■□□□□ 0.41
TDP2-205ENST00000480495 PRO3102Q9H379 93 aa17.62■□□□□ 0.41
TDP2-205ENST00000480495 ABHD16BQ9H3Z7 469 aa17.62■□□□□ 0.41
TDP2-205ENST00000480495 KAT14Q9H8E8 782 aa17.62■□□□□ 0.41
TDP2-205ENST00000480495 XPNPEP3Q9NQH7 507 aa17.62■□□□□ 0.41
TDP2-205ENST00000480495 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.62■□□□□ 0.41
TDP2-205ENST00000480495 FAM184BQ9ULE4 1060 aa17.62■□□□□ 0.41
TDP2-205ENST00000480495 U3KPZ7 1027 aaPredicted RBP17.62■□□□□ 0.41
TDP2-205ENST00000480495 CNTN2Q02246 1040 aa17.61■□□□□ 0.41
TDP2-205ENST00000480495 TRDNQ13061 729 aa17.61■□□□□ 0.41
TDP2-205ENST00000480495 ACVR2BQ13705 512 aa17.61■□□□□ 0.41
TDP2-205ENST00000480495 CENPQQ7L2Z9 268 aaPredicted RBP17.61■□□□□ 0.41
TDP2-205ENST00000480495 RNF180Q86T96 592 aa17.61■□□□□ 0.41
TDP2-205ENST00000480495 ENAHQ8N8S7 591 aaPredicted RBP17.61■□□□□ 0.41
TDP2-205ENST00000480495 RBM27Q9P2N5 1060 aaKnown RBP17.61■□□□□ 0.41
TDP2-205ENST00000480495 TNKSO95271 1327 aa17.61■□□□□ 0.41
TDP2-205ENST00000480495 ALPK3Q96L96 1907 aa17.6■□□□□ 0.41
TDP2-205ENST00000480495 ASB14A6NK59 587 aa17.6■□□□□ 0.41
TDP2-205ENST00000480495 MYCNP04198 464 aaPredicted RBP17.6■□□□□ 0.41
TDP2-205ENST00000480495 PTH1RQ03431 593 aa17.6■□□□□ 0.41
TDP2-205ENST00000480495 MUM1L1Q5H9M0 696 aa17.6■□□□□ 0.41
TDP2-205ENST00000480495 ARMCX2Q7L311 632 aa17.6■□□□□ 0.41
TDP2-205ENST00000480495 CYP39A1Q9NYL5 469 aa17.6■□□□□ 0.41
TDP2-205ENST00000480495 ZHX1Q9UKY1 873 aaPredicted RBP17.6■□□□□ 0.41
TDP2-205ENST00000480495 ZMYND8Q9ULU4 1186 aaPredicted RBP17.6■□□□□ 0.41
TDP2-205ENST00000480495 WDR19Q8NEZ3 1342 aa17.59■□□□□ 0.41
TDP2-205ENST00000480495 A0A1W2PPC1 479 aa17.59■□□□□ 0.41
TDP2-205ENST00000480495 ASPRV1Q53RT3 343 aa17.59■□□□□ 0.41
TDP2-205ENST00000480495 NSMFQ6X4W1 530 aa17.59■□□□□ 0.41
TDP2-205ENST00000480495 CCDC144CPQ8IYA2 1237 aa17.59■□□□□ 0.41
TDP2-205ENST00000480495 SOWAHBA6NEL2 793 aa17.58■□□□□ 0.4
TDP2-205ENST00000480495 DUSP11O75319 330 aaKnown RBP17.58■□□□□ 0.4
TDP2-205ENST00000480495 PGK1P00558 417 aa17.58■□□□□ 0.4
TDP2-205ENST00000480495 CYP21A2P08686 494 aa17.58■□□□□ 0.4
TDP2-205ENST00000480495 ADCYAP1R1P41586 468 aa17.58■□□□□ 0.4
TDP2-205ENST00000480495 ATN1P54259 1190 aaPredicted RBP17.58■□□□□ 0.4
TDP2-205ENST00000480495 IFIT1BQ5T764 474 aaKnown RBP17.58■□□□□ 0.4
TDP2-205ENST00000480495 SLC39A5Q6ZMH5 540 aa17.58■□□□□ 0.4
TDP2-205ENST00000480495 MAP4K1Q92918 833 aa17.58■□□□□ 0.4
TDP2-205ENST00000480495 PHF24Q9UPV7 400 aa17.58■□□□□ 0.4
TDP2-205ENST00000480495 ADAMTS4O75173 837 aa17.57■□□□□ 0.4
TDP2-205ENST00000480495 GOLGA8HP0CJ92 632 aa17.57■□□□□ 0.4
TDP2-205ENST00000480495 SYN1P17600 705 aa17.57■□□□□ 0.4
TDP2-205ENST00000480495 BMP8BP34820 402 aa17.57■□□□□ 0.4
TDP2-205ENST00000480495 RTP1P59025 263 aa17.57■□□□□ 0.4
TDP2-205ENST00000480495 SNX17Q15036 470 aa17.57■□□□□ 0.4
TDP2-205ENST00000480495 CCDC144BQ3MJ40 725 aa17.57■□□□□ 0.4
TDP2-205ENST00000480495 C1orf53Q5VUE5 145 aa17.57■□□□□ 0.4
TDP2-205ENST00000480495 GDF15Q99988 308 aa17.57■□□□□ 0.4
TDP2-205ENST00000480495 TSEN34Q9BSV6 310 aaKnown RBP17.57■□□□□ 0.4
TDP2-205ENST00000480495 SYNRGQ9UMZ2 1314 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms