RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 PLXNA1Q9UIW2 1896 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 ASNSP08243 561 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 SMARCA1P28370 1054 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 SLC1A4P43007 532 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 JAG1P78504 1218 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 KCTD1Q719H9 257 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 HEATR3Q7Z4Q2 680 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 GMCL1P1Q8NEA9 526 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 LEO1Q8WVC0 666 aaPredicted RBP12.01□□□□□ -0.49
LINC00173-203ENST00000480237 PHF20Q9BVI0 1012 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 ZNF341Q9BYN7 854 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 FOXP1Q9H334 677 aaPredicted RBP12.01□□□□□ -0.49
LINC00173-203ENST00000480237 SH2D4AQ9H788 454 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 GOPCQ9HD26 462 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 PPP2R3BQ9Y5P8 575 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 LCTP09848 1927 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 GADD45BO75293 160 aaPredicted RBP12□□□□□ -0.49
LINC00173-203ENST00000480237 U2AF2P26368 475 aaKnown RBP eCLIP12□□□□□ -0.49
LINC00173-203ENST00000480237 CALML3P27482 149 aa12□□□□□ -0.49
LINC00173-203ENST00000480237 HIRAP54198 1017 aaPredicted RBP12□□□□□ -0.49
LINC00173-203ENST00000480237 NLRP5P59047 1200 aa12□□□□□ -0.49
LINC00173-203ENST00000480237 UBE2HP62256 183 aa12□□□□□ -0.49
LINC00173-203ENST00000480237 MAP3K10Q02779 954 aa12□□□□□ -0.49
LINC00173-203ENST00000480237 SLC35G1Q2M3R5 365 aa12□□□□□ -0.49
LINC00173-203ENST00000480237 NBPF12Q5TAG4 269 aaPredicted RBP12□□□□□ -0.49
LINC00173-203ENST00000480237 NOSTRINQ8IVI9 506 aa12□□□□□ -0.49
LINC00173-203ENST00000480237 GPT2Q8TD30 523 aa12□□□□□ -0.49
LINC00173-203ENST00000480237 CCDC12Q8WUD4 166 aaPredicted RBP12□□□□□ -0.49
LINC00173-203ENST00000480237 USP28Q96RU2 1077 aa12□□□□□ -0.49
LINC00173-203ENST00000480237 FTOQ9C0B1 505 aaKnown RBP eCLIP12□□□□□ -0.49
LINC00173-203ENST00000480237 UBA5Q9GZZ9 404 aa12□□□□□ -0.49
LINC00173-203ENST00000480237 VAT1LQ9HCJ6 419 aa12□□□□□ -0.49
LINC00173-203ENST00000480237 SH3GLB2Q9NR46 395 aa12□□□□□ -0.49
LINC00173-203ENST00000480237 SYNPO2Q9UMS6 1093 aa12□□□□□ -0.49
LINC00173-203ENST00000480237 PCDHGA10Q9Y5H3 936 aa12□□□□□ -0.49
LINC00173-203ENST00000480237 MYH9P35579 1960 aaKnown RBP11.99□□□□□ -0.49
LINC00173-203ENST00000480237 POTEB3A0JP26 581 aa11.99□□□□□ -0.49
LINC00173-203ENST00000480237 TESPA1A2RU30 521 aaPredicted RBP11.99□□□□□ -0.49
LINC00173-203ENST00000480237 GOLGA6L4A6NEF3 574 aa11.99□□□□□ -0.49
LINC00173-203ENST00000480237 POTEMA6NI47 508 aa11.99□□□□□ -0.49
LINC00173-203ENST00000480237 BTBD18B2RXH4 712 aa11.99□□□□□ -0.49
LINC00173-203ENST00000480237 NDUFB10O96000 172 aa11.99□□□□□ -0.49
LINC00173-203ENST00000480237 NAPAP54920 295 aa11.99□□□□□ -0.49
LINC00173-203ENST00000480237 IKQ13123 557 aaPredicted RBP11.99□□□□□ -0.49
LINC00173-203ENST00000480237 STK38Q15208 465 aa11.99□□□□□ -0.49
LINC00173-203ENST00000480237 WWC2Q6AWC2 1192 aa11.99□□□□□ -0.49
LINC00173-203ENST00000480237 POTEBQ6S5H4 581 aa11.99□□□□□ -0.49
LINC00173-203ENST00000480237 POTEGQ6S5H5 508 aa11.99□□□□□ -0.49
LINC00173-203ENST00000480237 SHISA4Q96DD7 197 aa11.99□□□□□ -0.49
LINC00173-203ENST00000480237 PIGSQ96S52 555 aa11.99□□□□□ -0.49
LINC00173-203ENST00000480237 FEZ1Q99689 392 aa11.99□□□□□ -0.49
LINC00173-203ENST00000480237 GZF1Q9H116 711 aaPredicted RBP11.99□□□□□ -0.49
LINC00173-203ENST00000480237 RIOX1Q9H6W3 641 aa11.99□□□□□ -0.49
LINC00173-203ENST00000480237 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.99□□□□□ -0.49
LINC00173-203ENST00000480237 MCM3APO60318 1980 aa11.99□□□□□ -0.49
LINC00173-203ENST00000480237 PHF20L1A8MW92 1017 aa11.98□□□□□ -0.49
LINC00173-203ENST00000480237 F5H6K3 240 aa11.98□□□□□ -0.49
LINC00173-203ENST00000480237 STXBP3O00186 592 aa11.98□□□□□ -0.49
LINC00173-203ENST00000480237 KLRC3Q07444 240 aa11.98□□□□□ -0.49
LINC00173-203ENST00000480237 NR5A1Q13285 461 aa11.98□□□□□ -0.49
LINC00173-203ENST00000480237 TTBK2Q6IQ55 1244 aa11.98□□□□□ -0.49
LINC00173-203ENST00000480237 CAVIN1Q6NZI2 390 aaKnown RBP11.98□□□□□ -0.49
LINC00173-203ENST00000480237 SIAH1Q8IUQ4 282 aa11.98□□□□□ -0.49
LINC00173-203ENST00000480237 FAM177A1Q8N128 213 aaPredicted RBP11.98□□□□□ -0.49
LINC00173-203ENST00000480237 DCPSQ96C86 337 aaKnown RBP11.98□□□□□ -0.49
LINC00173-203ENST00000480237 GMCL1Q96IK5 515 aa11.98□□□□□ -0.49
LINC00173-203ENST00000480237 GINM1Q9NU53 330 aa11.98□□□□□ -0.49
LINC00173-203ENST00000480237 POLR3EQ9NVU0 708 aa11.98□□□□□ -0.49
LINC00173-203ENST00000480237 BARHL2Q9NY43 387 aa11.98□□□□□ -0.49
LINC00173-203ENST00000480237 A0A1W2PRG0 241 aa11.97□□□□□ -0.49
LINC00173-203ENST00000480237 hCG_1984214I3L0E3 225 aa11.97□□□□□ -0.49
LINC00173-203ENST00000480237 PLXNB2O15031 1838 aa11.97□□□□□ -0.49
LINC00173-203ENST00000480237 YEATS4O95619 227 aa11.97□□□□□ -0.49
LINC00173-203ENST00000480237 BMP3P12645 472 aa11.97□□□□□ -0.49
LINC00173-203ENST00000480237 SLC16A2P36021 539 aa11.97□□□□□ -0.49
LINC00173-203ENST00000480237 ECE1P42892 770 aa11.97□□□□□ -0.49
LINC00173-203ENST00000480237 SF3A1Q15459 793 aaKnown RBP11.97□□□□□ -0.49
LINC00173-203ENST00000480237 ZYXQ15942 572 aaKnown RBP11.97□□□□□ -0.49
LINC00173-203ENST00000480237 PRAMEF18Q5VWM3 479 aa11.97□□□□□ -0.49
LINC00173-203ENST00000480237 ANO1Q5XXA6 986 aa11.97□□□□□ -0.49
LINC00173-203ENST00000480237 SULF1Q8IWU6 871 aa11.97□□□□□ -0.49
LINC00173-203ENST00000480237 ADGRF4Q8IZF3 695 aa11.97□□□□□ -0.49
LINC00173-203ENST00000480237 ZNF713Q8N859 430 aaPredicted RBP11.97□□□□□ -0.49
LINC00173-203ENST00000480237 BICD2Q8TD16 824 aa11.97□□□□□ -0.49
LINC00173-203ENST00000480237 ACER1Q8TDN7 264 aa11.97□□□□□ -0.49
LINC00173-203ENST00000480237 SYAP1Q96A49 352 aaPredicted RBP11.97□□□□□ -0.49
LINC00173-203ENST00000480237 WRNIP1Q96S55 665 aa11.97□□□□□ -0.49
LINC00173-203ENST00000480237 NUP88Q99567 741 aaPredicted RBP11.97□□□□□ -0.49
LINC00173-203ENST00000480237 RTEL1Q9NZ71 1219 aa11.97□□□□□ -0.49
LINC00173-203ENST00000480237 NOL7Q9UMY1 257 aaKnown RBP11.97□□□□□ -0.49
LINC00173-203ENST00000480237 TMX2Q9Y320 296 aa11.97□□□□□ -0.49
LINC00173-203ENST00000480237 GLTPD2A6NH11 291 aa11.96□□□□□ -0.49
LINC00173-203ENST00000480237 CTNND1O60716 968 aaKnown RBP11.96□□□□□ -0.49
LINC00173-203ENST00000480237 VEGFAP15692 232 aaPredicted RBP11.96□□□□□ -0.49
LINC00173-203ENST00000480237 INPP5BP32019 993 aa11.96□□□□□ -0.49
LINC00173-203ENST00000480237 EPHX2P34913 555 aa11.96□□□□□ -0.49
LINC00173-203ENST00000480237 ME1P48163 572 aa11.96□□□□□ -0.49
LINC00173-203ENST00000480237 SUPT20HL1Q3ZLR7 823 aa11.96□□□□□ -0.49
LINC00173-203ENST00000480237 RILPL1Q5EBL4 403 aa11.96□□□□□ -0.49
LINC00173-203ENST00000480237 CCDC84Q86UT8 332 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms