RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 ATP2A1O14983 1001 aa19.42■□□□□ 0.7
SCAMP3-207ENST00000480219 FLOT1O75955 427 aa19.42■□□□□ 0.7
SCAMP3-207ENST00000480219 MMP1P03956 469 aa19.42■□□□□ 0.7
SCAMP3-207ENST00000480219 ZSCAN22P10073 491 aaPredicted RBP19.42■□□□□ 0.7
SCAMP3-207ENST00000480219 OAZ1P54368 228 aa19.42■□□□□ 0.7
SCAMP3-207ENST00000480219 GALNT17Q6IS24 598 aa19.42■□□□□ 0.7
SCAMP3-207ENST00000480219 HOMER1Q86YM7 354 aa19.42■□□□□ 0.7
SCAMP3-207ENST00000480219 DAGLBQ8NCG7 672 aa19.42■□□□□ 0.7
SCAMP3-207ENST00000480219 CCDC148Q8NFR7 591 aa19.42■□□□□ 0.7
SCAMP3-207ENST00000480219 CCDC12Q8WUD4 166 aaPredicted RBP19.42■□□□□ 0.7
SCAMP3-207ENST00000480219 CCDC102AQ96A19 550 aa19.42■□□□□ 0.7
SCAMP3-207ENST00000480219 KIFC2Q96AC6 838 aa19.42■□□□□ 0.7
SCAMP3-207ENST00000480219 ZMYND12Q9H0C1 365 aa19.42■□□□□ 0.7
SCAMP3-207ENST00000480219 HOXC10Q9NYD6 342 aa19.42■□□□□ 0.7
SCAMP3-207ENST00000480219 ISY1Q9ULR0 285 aaKnown RBP19.42■□□□□ 0.7
SCAMP3-207ENST00000480219 ZNF536O15090 1300 aa19.42■□□□□ 0.7
SCAMP3-207ENST00000480219 SPDYE16A6NNV3 312 aaPredicted RBP19.41■□□□□ 0.7
SCAMP3-207ENST00000480219 VWA5AO00534 786 aa19.41■□□□□ 0.7
SCAMP3-207ENST00000480219 ZNF157P51786 506 aaPredicted RBP19.41■□□□□ 0.7
SCAMP3-207ENST00000480219 TRIM29Q14134 588 aa19.41■□□□□ 0.7
SCAMP3-207ENST00000480219 GADL1Q6ZQY3 521 aa19.41■□□□□ 0.7
SCAMP3-207ENST00000480219 ANKRD23Q86SG2 305 aa19.41■□□□□ 0.7
SCAMP3-207ENST00000480219 BRI3BPQ8WY22 251 aa19.41■□□□□ 0.7
SCAMP3-207ENST00000480219 AMNQ9BXJ7 453 aa19.41■□□□□ 0.7
SCAMP3-207ENST00000480219 ZCCHC17Q9NP64 241 aaKnown RBP19.41■□□□□ 0.7
SCAMP3-207ENST00000480219 CREBZFQ9NS37 354 aa19.41■□□□□ 0.7
SCAMP3-207ENST00000480219 GJB4Q9NTQ9 266 aa19.41■□□□□ 0.7
SCAMP3-207ENST00000480219 VPS54Q9P1Q0 977 aa19.41■□□□□ 0.7
SCAMP3-207ENST00000480219 MANSC4A6NHS7 340 aaPredicted RBP19.4■□□□□ 0.7
SCAMP3-207ENST00000480219 RASSF10A6NK89 507 aa19.4■□□□□ 0.7
SCAMP3-207ENST00000480219 H3BQV1 296 aa19.4■□□□□ 0.7
SCAMP3-207ENST00000480219 ICAM1P05362 532 aa19.4■□□□□ 0.7
SCAMP3-207ENST00000480219 U2AF2P26368 475 aaKnown RBP eCLIP19.4■□□□□ 0.7
SCAMP3-207ENST00000480219 CALML3P27482 149 aa19.4■□□□□ 0.7
SCAMP3-207ENST00000480219 APLP1P51693 650 aa19.4■□□□□ 0.7
SCAMP3-207ENST00000480219 IFFO2Q5TF58 517 aa19.4■□□□□ 0.7
SCAMP3-207ENST00000480219 HEATR3Q7Z4Q2 680 aa19.4■□□□□ 0.7
SCAMP3-207ENST00000480219 FBXO11Q86XK2 927 aa19.4■□□□□ 0.7
SCAMP3-207ENST00000480219 MB21D1Q8N884 522 aa19.4■□□□□ 0.7
SCAMP3-207ENST00000480219 GPKOWQ92917 476 aaPredicted RBP eCLIP19.4■□□□□ 0.7
SCAMP3-207ENST00000480219 CCL15-CCL14A0A0B4J2E2 113 aa19.39■□□□□ 0.69
SCAMP3-207ENST00000480219 VPS37CA5D8V6 355 aaPredicted RBP19.39■□□□□ 0.69
SCAMP3-207ENST00000480219 M0R2N6 131 aa19.39■□□□□ 0.69
SCAMP3-207ENST00000480219 F13A1P00488 732 aa19.39■□□□□ 0.69
SCAMP3-207ENST00000480219 KIF23Q02241 960 aaPredicted RBP19.39■□□□□ 0.69
SCAMP3-207ENST00000480219 RESTQ13127 1097 aa19.39■□□□□ 0.69
SCAMP3-207ENST00000480219 CCL15Q16663 113 aa19.39■□□□□ 0.69
SCAMP3-207ENST00000480219 OTUD7BQ6GQQ9 843 aa19.39■□□□□ 0.69
SCAMP3-207ENST00000480219 PIBF1Q8WXW3 757 aa19.39■□□□□ 0.69
SCAMP3-207ENST00000480219 ATG4CQ96DT6 458 aa19.39■□□□□ 0.69
SCAMP3-207ENST00000480219 MAF1Q9H063 256 aa19.39■□□□□ 0.69
SCAMP3-207ENST00000480219 ASCC2Q9H1I8 757 aaPredicted RBP19.39■□□□□ 0.69
SCAMP3-207ENST00000480219 FOXP1Q9H334 677 aaPredicted RBP19.39■□□□□ 0.69
SCAMP3-207ENST00000480219 ZSCAN16Q9H4T2 348 aaPredicted RBP19.39■□□□□ 0.69
SCAMP3-207ENST00000480219 ZNF214Q9UL59 606 aaPredicted RBP19.39■□□□□ 0.69
SCAMP3-207ENST00000480219 BTBD19C9JJ37 291 aa19.38■□□□□ 0.69
SCAMP3-207ENST00000480219 ZBED4O75132 1171 aa19.38■□□□□ 0.69
SCAMP3-207ENST00000480219 INHBEP58166 350 aa19.38■□□□□ 0.69
SCAMP3-207ENST00000480219 GHRHRQ02643 423 aa19.38■□□□□ 0.69
SCAMP3-207ENST00000480219 POTEEQ6S8J3 1075 aa19.38■□□□□ 0.69
SCAMP3-207ENST00000480219 CLEC17AQ6ZS10 378 aa19.38■□□□□ 0.69
SCAMP3-207ENST00000480219 GTF3C2Q8WUA4 911 aaPredicted RBP19.38■□□□□ 0.69
SCAMP3-207ENST00000480219 TNFRSF25Q93038 417 aa19.38■□□□□ 0.69
SCAMP3-207ENST00000480219 COA7Q96BR5 231 aa19.38■□□□□ 0.69
SCAMP3-207ENST00000480219 GLT8D2Q9H1C3 349 aa19.38■□□□□ 0.69
SCAMP3-207ENST00000480219 PNMA3Q9UL41 463 aa19.38■□□□□ 0.69
SCAMP3-207ENST00000480219 KCNJ14Q9UNX9 436 aa19.38■□□□□ 0.69
SCAMP3-207ENST00000480219 PCDHA1Q9Y5I3 950 aa19.38■□□□□ 0.69
SCAMP3-207ENST00000480219 ABCB11O95342 1321 aa19.37■□□□□ 0.69
SCAMP3-207ENST00000480219 OSBPP22059 807 aa19.37■□□□□ 0.69
SCAMP3-207ENST00000480219 NAPAP54920 295 aa19.37■□□□□ 0.69
SCAMP3-207ENST00000480219 HERVK_113P62684 666 aa19.37■□□□□ 0.69
SCAMP3-207ENST00000480219 GUCY1B3Q02153 619 aa19.37■□□□□ 0.69
SCAMP3-207ENST00000480219 DIS3L2Q8IYB7 885 aaKnown RBP19.37■□□□□ 0.69
SCAMP3-207ENST00000480219 P2RX7Q99572 595 aaKnown RBP19.37■□□□□ 0.69
SCAMP3-207ENST00000480219 PTPN18Q99952 460 aa19.37■□□□□ 0.69
SCAMP3-207ENST00000480219 RIC8AQ9NPQ8 531 aa19.37■□□□□ 0.69
SCAMP3-207ENST00000480219 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.37■□□□□ 0.69
SCAMP3-207ENST00000480219 ABT1Q9ULW3 272 aaKnown RBP19.37■□□□□ 0.69
SCAMP3-207ENST00000480219 PCDHA4Q9UN74 947 aa19.37■□□□□ 0.69
SCAMP3-207ENST00000480219 OPLAHO14841 1288 aa19.36■□□□□ 0.69
SCAMP3-207ENST00000480219 GNA11P29992 359 aa19.36■□□□□ 0.69
SCAMP3-207ENST00000480219 NLRP5P59047 1200 aa19.36■□□□□ 0.69
SCAMP3-207ENST00000480219 SNAP25P60880 206 aa19.36■□□□□ 0.69
SCAMP3-207ENST00000480219 IRX3P78415 501 aaPredicted RBP19.36■□□□□ 0.69
SCAMP3-207ENST00000480219 SAFBQ15424 915 aaKnown RBP eCLIP19.36■□□□□ 0.69
SCAMP3-207ENST00000480219 BRAPQ7Z569 592 aa19.36■□□□□ 0.69
SCAMP3-207ENST00000480219 C6orf50Q9HD87 102 aa19.36■□□□□ 0.69
SCAMP3-207ENST00000480219 COL11A1P12107 1806 aaPredicted RBP19.36■□□□□ 0.69
SCAMP3-207ENST00000480219 SMCO2A6NFE2 343 aa19.35■□□□□ 0.69
SCAMP3-207ENST00000480219 KRT2P35908 639 aa19.35■□□□□ 0.69
SCAMP3-207ENST00000480219 CLK2P49760 499 aaKnown RBP19.35■□□□□ 0.69
SCAMP3-207ENST00000480219 TMEM132BQ14DG7 1078 aa19.35■□□□□ 0.69
SCAMP3-207ENST00000480219 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.35■□□□□ 0.69
SCAMP3-207ENST00000480219 BLIDQ8IZY5 108 aa19.35■□□□□ 0.69
SCAMP3-207ENST00000480219 SAMD3Q8N6K7 520 aa19.35■□□□□ 0.69
SCAMP3-207ENST00000480219 BICD2Q8TD16 824 aa19.35■□□□□ 0.69
SCAMP3-207ENST00000480219 BRMS1Q9HCU9 246 aa19.35■□□□□ 0.69
SCAMP3-207ENST00000480219 MRPL11Q9Y3B7 192 aaKnown RBP19.35■□□□□ 0.69
SCAMP3-207ENST00000480219 BTBD18B2RXH4 712 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms