RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 PSMC6P62333 389 aa13.53□□□□□ -0.24
CCDC18-208ENST00000479653 TNFAIP2Q03169 654 aa13.53□□□□□ -0.24
CCDC18-208ENST00000479653 EVX2Q03828 476 aa13.53□□□□□ -0.24
CCDC18-208ENST00000479653 GABPAQ06546 454 aa13.53□□□□□ -0.24
CCDC18-208ENST00000479653 LEXMQ3ZCV2 418 aa13.53□□□□□ -0.24
CCDC18-208ENST00000479653 PTCRAQ6ISU1 281 aaPredicted RBP13.53□□□□□ -0.24
CCDC18-208ENST00000479653 SPRED2Q7Z698 418 aa13.53□□□□□ -0.24
CCDC18-208ENST00000479653 HERC6Q8IVU3 1022 aa13.53□□□□□ -0.24
CCDC18-208ENST00000479653 GDPD5Q8WTR4 605 aa13.53□□□□□ -0.24
CCDC18-208ENST00000479653 AGBL1Q96MI9 1066 aa13.53□□□□□ -0.24
CCDC18-208ENST00000479653 FTOQ9C0B1 505 aaKnown RBP eCLIP13.53□□□□□ -0.24
CCDC18-208ENST00000479653 PPP1R9AQ9ULJ8 1098 aa13.53□□□□□ -0.24
CCDC18-208ENST00000479653 ZNF536O15090 1300 aa13.53□□□□□ -0.24
CCDC18-208ENST00000479653 GRIN2DO15399 1336 aa13.53□□□□□ -0.24
CCDC18-208ENST00000479653 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.52□□□□□ -0.25
CCDC18-208ENST00000479653 ZEB2O60315 1214 aa13.52□□□□□ -0.25
CCDC18-208ENST00000479653 CYP2C9P11712 490 aa13.52□□□□□ -0.25
CCDC18-208ENST00000479653 SNRNP48Q6IEG0 339 aaKnown RBP13.52□□□□□ -0.25
CCDC18-208ENST00000479653 HFE2Q6ZVN8 426 aa13.52□□□□□ -0.25
CCDC18-208ENST00000479653 ANKRD35Q8N283 1001 aa13.52□□□□□ -0.25
CCDC18-208ENST00000479653 MFSD14AQ96MC6 490 aa13.52□□□□□ -0.25
CCDC18-208ENST00000479653 AP5M1Q9H0R1 490 aa13.52□□□□□ -0.25
CCDC18-208ENST00000479653 LMCD1Q9NZU5 365 aa13.52□□□□□ -0.25
CCDC18-208ENST00000479653 MTUS1Q9ULD2 1270 aa13.52□□□□□ -0.25
CCDC18-208ENST00000479653 GBF1Q92538 1859 aa13.52□□□□□ -0.25
CCDC18-208ENST00000479653 USP34Q70CQ2 3546 aa13.51□□□□□ -0.25
CCDC18-208ENST00000479653 DNAJC25-GNG10A0A024R161 153 aa13.51□□□□□ -0.25
CCDC18-208ENST00000479653 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.51□□□□□ -0.25
CCDC18-208ENST00000479653 DYNC1LI2O43237 492 aaPredicted RBP13.51□□□□□ -0.25
CCDC18-208ENST00000479653 AKR1B1P15121 316 aa13.51□□□□□ -0.25
CCDC18-208ENST00000479653 FOXK2Q01167 660 aa13.51□□□□□ -0.25
CCDC18-208ENST00000479653 FSCN1Q16658 493 aaKnown RBP13.51□□□□□ -0.25
CCDC18-208ENST00000479653 ARMCX2Q7L311 632 aa13.51□□□□□ -0.25
CCDC18-208ENST00000479653 ZNF467Q7Z7K2 595 aaPredicted RBP13.51□□□□□ -0.25
CCDC18-208ENST00000479653 CPXCR1Q8N123 301 aa13.51□□□□□ -0.25
CCDC18-208ENST00000479653 TEX13BQ9BXU2 312 aa13.51□□□□□ -0.25
CCDC18-208ENST00000479653 SEZ6LQ9BYH1 1024 aa13.51□□□□□ -0.25
CCDC18-208ENST00000479653 NOB1Q9ULX3 412 aaKnown RBP13.51□□□□□ -0.25
CCDC18-208ENST00000479653 RIPK3Q9Y572 518 aa13.51□□□□□ -0.25
CCDC18-208ENST00000479653 POTEB3A0JP26 581 aa13.5□□□□□ -0.25
CCDC18-208ENST00000479653 GNAI3P08754 354 aa13.5□□□□□ -0.25
CCDC18-208ENST00000479653 SUPT20HL2P0C7V6 817 aa13.5□□□□□ -0.25
CCDC18-208ENST00000479653 MTX1Q13505 466 aa13.5□□□□□ -0.25
CCDC18-208ENST00000479653 TNNI3KQ59H18 835 aa13.5□□□□□ -0.25
CCDC18-208ENST00000479653 FAM83BQ5T0W9 1011 aa13.5□□□□□ -0.25
CCDC18-208ENST00000479653 POTEBQ6S5H4 581 aa13.5□□□□□ -0.25
CCDC18-208ENST00000479653 TLK2Q86UE8 772 aa13.5□□□□□ -0.25
CCDC18-208ENST00000479653 CCDC144CPQ8IYA2 1237 aa13.5□□□□□ -0.25
CCDC18-208ENST00000479653 REPS2Q8NFH8 660 aa13.5□□□□□ -0.25
CCDC18-208ENST00000479653 DYNLL2Q96FJ2 89 aa13.5□□□□□ -0.25
CCDC18-208ENST00000479653 ZBED2Q9BTP6 218 aa13.5□□□□□ -0.25
CCDC18-208ENST00000479653 ALDH8A1Q9H2A2 487 aaPredicted RBP13.5□□□□□ -0.25
CCDC18-208ENST00000479653 TRMT13Q9NUP7 481 aaKnown RBP13.5□□□□□ -0.25
CCDC18-208ENST00000479653 CTDP1Q9Y5B0 961 aaPredicted RBP13.5□□□□□ -0.25
CCDC18-208ENST00000479653 FPGT-TNNI3KV9GXZ4 949 aa13.5□□□□□ -0.25
CCDC18-208ENST00000479653 A0A0G2JMZ2 1700 aa13.5□□□□□ -0.25
CCDC18-208ENST00000479653 ASTN1O14525 1302 aa13.49□□□□□ -0.25
CCDC18-208ENST00000479653 MAGEB6P1A0A0J9YX57 407 aa13.49□□□□□ -0.25
CCDC18-208ENST00000479653 GRXCR2A6NFK2 248 aa13.49□□□□□ -0.25
CCDC18-208ENST00000479653 CYP2D6P10635 497 aa13.49□□□□□ -0.25
CCDC18-208ENST00000479653 EEF2P13639 858 aaKnown RBP13.49□□□□□ -0.25
CCDC18-208ENST00000479653 PTGS1P23219 599 aa13.49□□□□□ -0.25
CCDC18-208ENST00000479653 NKX3-2P78367 333 aa13.49□□□□□ -0.25
CCDC18-208ENST00000479653 OS9Q13438 667 aaPredicted RBP13.49□□□□□ -0.25
CCDC18-208ENST00000479653 ALDH1L2Q3SY69 923 aa13.49□□□□□ -0.25
CCDC18-208ENST00000479653 CRNKL1Q9BZJ0 848 aaKnown RBP13.49□□□□□ -0.25
CCDC18-208ENST00000479653 API5Q9BZZ5 524 aaKnown RBP13.49□□□□□ -0.25
CCDC18-208ENST00000479653 GOPCQ9HD26 462 aa13.49□□□□□ -0.25
CCDC18-208ENST00000479653 SWAP70Q9UH65 585 aa13.49□□□□□ -0.25
CCDC18-208ENST00000479653 CFAP54Q96N23 3096 aa13.49□□□□□ -0.25
CCDC18-208ENST00000479653 LCHNA4D1U4 455 aa13.48□□□□□ -0.25
CCDC18-208ENST00000479653 H3BQ06 376 aaPredicted RBP13.48□□□□□ -0.25
CCDC18-208ENST00000479653 ATXN8OSP0DMR3 200 aa13.48□□□□□ -0.25
CCDC18-208ENST00000479653 KCNJ6P48051 423 aa13.48□□□□□ -0.25
CCDC18-208ENST00000479653 PUS10Q3MIT2 529 aaKnown RBP13.48□□□□□ -0.25
CCDC18-208ENST00000479653 EP400NLQ6ZTU2 488 aa13.48□□□□□ -0.25
CCDC18-208ENST00000479653 TMCO2Q7Z6W1 182 aaPredicted RBP13.48□□□□□ -0.25
CCDC18-208ENST00000479653 RETREG2Q8NC44 543 aa13.48□□□□□ -0.25
CCDC18-208ENST00000479653 ZNF512BQ96KM6 892 aaPredicted RBP13.48□□□□□ -0.25
CCDC18-208ENST00000479653 SLF1Q9BQI6 1058 aa13.48□□□□□ -0.25
CCDC18-208ENST00000479653 RIOK1Q9BRS2 568 aaKnown RBP13.48□□□□□ -0.25
CCDC18-208ENST00000479653 SUGCTQ9HAC7 445 aa13.48□□□□□ -0.25
CCDC18-208ENST00000479653 ZFHX2Q9C0A1 2572 aaPredicted RBP13.48□□□□□ -0.25
CCDC18-208ENST00000479653 ZNFX1Q9P2E3 1918 aaKnown RBP13.47□□□□□ -0.25
CCDC18-208ENST00000479653 TNKSO95271 1327 aa13.47□□□□□ -0.25
CCDC18-208ENST00000479653 CDK5RAP2Q96SN8 1893 aa13.47□□□□□ -0.25
CCDC18-208ENST00000479653 PNMA6EA0A0J9YXQ4 647 aa13.47□□□□□ -0.25
CCDC18-208ENST00000479653 ZBED4O75132 1171 aa13.47□□□□□ -0.25
CCDC18-208ENST00000479653 RFC2P35250 354 aa13.47□□□□□ -0.25
CCDC18-208ENST00000479653 SDR42E1Q8WUS8 393 aa13.47□□□□□ -0.25
CCDC18-208ENST00000479653 FGD4Q96M96 766 aa13.47□□□□□ -0.25
CCDC18-208ENST00000479653 NUP88Q99567 741 aaPredicted RBP13.47□□□□□ -0.25
CCDC18-208ENST00000479653 KATNBL1Q9H079 304 aa13.47□□□□□ -0.25
CCDC18-208ENST00000479653 ANTXR1Q9H6X2 564 aa13.47□□□□□ -0.25
CCDC18-208ENST00000479653 RAVER2Q9HCJ3 691 aaKnown RBP13.47□□□□□ -0.25
CCDC18-208ENST00000479653 GPR108Q9NPR9 543 aa13.47□□□□□ -0.25
CCDC18-208ENST00000479653 GNEQ9Y223 722 aaKnown RBP13.47□□□□□ -0.25
CCDC18-208ENST00000479653 BRWD1Q9NSI6 2320 aa13.46□□□□□ -0.25
CCDC18-208ENST00000479653 FOCADQ5VW36 1801 aa13.46□□□□□ -0.25
CCDC18-208ENST00000479653 SMPD1P17405 629 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms