RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 NLRC4Q9NPP4 1024 aa15.9■□□□□ 0.14
COL20A1-206ENST00000479501 COPB1P53618 953 aaKnown RBP15.9■□□□□ 0.14
COL20A1-206ENST00000479501 USP17L2Q6R6M4 530 aa15.9■□□□□ 0.14
COL20A1-206ENST00000479501 ZNF34Q8IZ26 560 aa15.9■□□□□ 0.14
COL20A1-206ENST00000479501 ENAHQ8N8S7 591 aaPredicted RBP15.9■□□□□ 0.14
COL20A1-206ENST00000479501 SLC39A2Q9NP94 309 aa15.9■□□□□ 0.14
COL20A1-206ENST00000479501 CPLX4Q7Z7G2 160 aa15.9■□□□□ 0.14
COL20A1-206ENST00000479501 CHURC1Q8WUH1 139 aa15.9■□□□□ 0.14
COL20A1-206ENST00000479501 IQCDQ96DY2 449 aa15.9■□□□□ 0.14
COL20A1-206ENST00000479501 CUEDC2Q9H467 287 aa15.9■□□□□ 0.14
COL20A1-206ENST00000479501 CYP2D6P10635 497 aa15.89■□□□□ 0.14
COL20A1-206ENST00000479501 NT5C2P49902 561 aa15.89■□□□□ 0.14
COL20A1-206ENST00000479501 RCAN1P53805 252 aa15.89■□□□□ 0.14
COL20A1-206ENST00000479501 PTPN21Q16825 1174 aa15.89■□□□□ 0.14
COL20A1-206ENST00000479501 PRR16Q569H4 304 aa15.89■□□□□ 0.14
COL20A1-206ENST00000479501 HOOK3Q86VS8 718 aa15.89■□□□□ 0.14
COL20A1-206ENST00000479501 GPBP1Q86WP2 473 aa15.89■□□□□ 0.14
COL20A1-206ENST00000479501 AK8Q96MA6 479 aa15.89■□□□□ 0.14
COL20A1-206ENST00000479501 MAGEF1Q9HAY2 307 aa15.89■□□□□ 0.14
COL20A1-206ENST00000479501 DDX25Q9UHL0 483 aaKnown RBP15.89■□□□□ 0.14
COL20A1-206ENST00000479501 COBLO75128 1261 aa15.89■□□□□ 0.13
COL20A1-206ENST00000479501 TNNC1P63316 161 aa15.89■□□□□ 0.13
COL20A1-206ENST00000479501 ASIC2Q16515 512 aa15.89■□□□□ 0.13
COL20A1-206ENST00000479501 MCTP2Q6DN12 878 aa15.89■□□□□ 0.13
COL20A1-206ENST00000479501 ANKS4BQ8N8V4 417 aa15.89■□□□□ 0.13
COL20A1-206ENST00000479501 AFAP1L1Q8TED9 768 aa15.89■□□□□ 0.13
COL20A1-206ENST00000479501 DCP1AQ9NPI6 582 aaPredicted RBP15.89■□□□□ 0.13
COL20A1-206ENST00000479501 SAMSN1Q9NSI8 373 aaKnown RBP15.89■□□□□ 0.13
COL20A1-206ENST00000479501 CFAP58Q5T655 872 aa15.89■□□□□ 0.13
COL20A1-206ENST00000479501 MYCT1Q8N699 235 aa15.89■□□□□ 0.13
COL20A1-206ENST00000479501 IFT81Q8WYA0 676 aa15.89■□□□□ 0.13
COL20A1-206ENST00000479501 GPR101Q96P66 508 aaPredicted RBP15.89■□□□□ 0.13
COL20A1-206ENST00000479501 NOX5Q96PH1 765 aa15.89■□□□□ 0.13
COL20A1-206ENST00000479501 MRPL44Q9H9J2 332 aaKnown RBP15.89■□□□□ 0.13
COL20A1-206ENST00000479501 GCNT3O95395 438 aa15.89■□□□□ 0.13
COL20A1-206ENST00000479501 TTLL1O95922 423 aa15.89■□□□□ 0.13
COL20A1-206ENST00000479501 TYW1BQ6NUM6 668 aa15.89■□□□□ 0.13
COL20A1-206ENST00000479501 FBXO11Q86XK2 927 aa15.89■□□□□ 0.13
COL20A1-206ENST00000479501 PPP1R13BQ96KQ4 1090 aa15.89■□□□□ 0.13
COL20A1-206ENST00000479501 PIGSQ96S52 555 aa15.89■□□□□ 0.13
COL20A1-206ENST00000479501 UBN2Q6ZU65 1347 aa15.89■□□□□ 0.13
COL20A1-206ENST00000479501 NDUFAB1O14561 156 aa15.88■□□□□ 0.13
COL20A1-206ENST00000479501 OAS2P29728 719 aaKnown RBP15.88■□□□□ 0.13
COL20A1-206ENST00000479501 CASP14P31944 242 aa15.88■□□□□ 0.13
COL20A1-206ENST00000479501 GOLGA8FQ08AF8 430 aa15.88■□□□□ 0.13
COL20A1-206ENST00000479501 GOLGA8DPQ0D2H9 430 aa15.88■□□□□ 0.13
COL20A1-206ENST00000479501 KLHL30Q0D2K2 578 aa15.88■□□□□ 0.13
COL20A1-206ENST00000479501 TBCKQ8TEA7 893 aa15.88■□□□□ 0.13
COL20A1-206ENST00000479501 FAM84BQ96KN1 310 aaPredicted RBP15.88■□□□□ 0.13
COL20A1-206ENST00000479501 IMPG2Q9BZV3 1241 aa15.88■□□□□ 0.13
COL20A1-206ENST00000479501 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.88■□□□□ 0.13
COL20A1-206ENST00000479501 SWAP70Q9UH65 585 aa15.88■□□□□ 0.13
COL20A1-206ENST00000479501 OVOS2A0A0G2JMS6 1433 aa15.88■□□□□ 0.13
COL20A1-206ENST00000479501 ZSCAN26Q16670 478 aa15.88■□□□□ 0.13
COL20A1-206ENST00000479501 CNKSR1Q969H4 720 aa15.88■□□□□ 0.13
COL20A1-206ENST00000479501 KIFC2Q96AC6 838 aa15.88■□□□□ 0.13
COL20A1-206ENST00000479501 IFIH1Q9BYX4 1025 aaKnown RBP15.88■□□□□ 0.13
COL20A1-206ENST00000479501 NSRP1Q9H0G5 558 aaKnown RBP15.88■□□□□ 0.13
COL20A1-206ENST00000479501 PNPLA7Q6ZV29 1317 aa15.88■□□□□ 0.13
COL20A1-206ENST00000479501 TMED8Q6PL24 325 aaPredicted RBP15.88■□□□□ 0.13
COL20A1-206ENST00000479501 GJA3Q9Y6H8 435 aa15.88■□□□□ 0.13
COL20A1-206ENST00000479501 DDX39AO00148 427 aaKnown RBP15.87■□□□□ 0.13
COL20A1-206ENST00000479501 CDK8P49336 464 aa15.87■□□□□ 0.13
COL20A1-206ENST00000479501 FAM26FQ5R3K3 315 aa15.87■□□□□ 0.13
COL20A1-206ENST00000479501 TPH2Q8IWU9 490 aa15.87■□□□□ 0.13
COL20A1-206ENST00000479501 PPM1EQ8WY54 764 aa15.87■□□□□ 0.13
COL20A1-206ENST00000479501 NUCKS1Q9H1E3 243 aaKnown RBP15.87■□□□□ 0.13
COL20A1-206ENST00000479501 MAEAQ7L5Y9 396 aa15.87■□□□□ 0.13
COL20A1-206ENST00000479501 PAGE5Q96GU1 130 aa15.87■□□□□ 0.13
COL20A1-206ENST00000479501 SFMBT2Q5VUG0 894 aa15.87■□□□□ 0.13
COL20A1-206ENST00000479501 ZNF512BQ96KM6 892 aaPredicted RBP15.87■□□□□ 0.13
COL20A1-206ENST00000479501 EPN1Q9Y6I3 576 aaPredicted RBP15.87■□□□□ 0.13
COL20A1-206ENST00000479501 CCDC169A6NNP5 214 aa15.87■□□□□ 0.13
COL20A1-206ENST00000479501 TMEM110-MUSTN1A8MSY1 372 aa15.87■□□□□ 0.13
COL20A1-206ENST00000479501 GNA14O95837 355 aa15.87■□□□□ 0.13
COL20A1-206ENST00000479501 SMTNP53814 917 aa15.87■□□□□ 0.13
COL20A1-206ENST00000479501 ARL6IP4Q66PJ3 421 aaKnown RBP15.87■□□□□ 0.13
COL20A1-206ENST00000479501 NSMFQ6X4W1 530 aa15.87■□□□□ 0.13
COL20A1-206ENST00000479501 VSTM4Q8IW00 320 aa15.87■□□□□ 0.13
COL20A1-206ENST00000479501 SEPT12Q8IYM1 358 aa15.87■□□□□ 0.13
COL20A1-206ENST00000479501 TUBGCP2Q9BSJ2 902 aa15.87■□□□□ 0.13
COL20A1-206ENST00000479501 RICTORQ6R327 1708 aa15.87■□□□□ 0.13
COL20A1-206ENST00000479501 B4DLN1 442 aa15.86■□□□□ 0.13
COL20A1-206ENST00000479501 GAS7O60861 476 aa15.86■□□□□ 0.13
COL20A1-206ENST00000479501 MYCLP12524 364 aaPredicted RBP15.86■□□□□ 0.13
COL20A1-206ENST00000479501 CCDC6Q16204 474 aa15.86■□□□□ 0.13
COL20A1-206ENST00000479501 ZNF658Q5TYW1 1059 aaPredicted RBP15.86■□□□□ 0.13
COL20A1-206ENST00000479501 SLFN12Q8IYM2 578 aa15.86■□□□□ 0.13
COL20A1-206ENST00000479501 OXER1Q8TDS5 423 aa15.86■□□□□ 0.13
COL20A1-206ENST00000479501 SH3RF3Q8TEJ3 882 aaPredicted RBP15.86■□□□□ 0.13
COL20A1-206ENST00000479501 ARHGEF1Q92888 912 aaKnown RBP15.86■□□□□ 0.13
COL20A1-206ENST00000479501 KCNB2Q92953 911 aa15.86■□□□□ 0.13
COL20A1-206ENST00000479501 DNAI2Q9GZS0 605 aa15.86■□□□□ 0.13
COL20A1-206ENST00000479501 HAUS4Q9H6D7 363 aa15.86■□□□□ 0.13
COL20A1-206ENST00000479501 TMEM232C9JQI7 657 aa15.86■□□□□ 0.13
COL20A1-206ENST00000479501 TNFAIP3P21580 790 aa15.86■□□□□ 0.13
COL20A1-206ENST00000479501 ARID5BQ14865 1188 aa15.86■□□□□ 0.13
COL20A1-206ENST00000479501 ABCB5Q2M3G0 1257 aa15.86■□□□□ 0.13
COL20A1-206ENST00000479501 NIM1KQ8IY84 436 aa15.86■□□□□ 0.13
COL20A1-206ENST00000479501 ZNF579Q8NAF0 562 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms