RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 TMEM132BQ14DG7 1078 aa17.34■□□□□ 0.37
USP11-207ENST00000478596 SLC43A3Q8NBI5 491 aa17.34■□□□□ 0.37
USP11-207ENST00000478596 VWCEQ96DN2 955 aa17.34■□□□□ 0.37
USP11-207ENST00000478596 CERS4Q9HA82 394 aa17.34■□□□□ 0.37
USP11-207ENST00000478596 SPC25Q9HBM1 224 aa17.34■□□□□ 0.37
USP11-207ENST00000478596 ST18O60284 1047 aa17.33■□□□□ 0.36
USP11-207ENST00000478596 FLOT1O75955 427 aa17.33■□□□□ 0.36
USP11-207ENST00000478596 SNAI1O95863 264 aaPredicted RBP17.33■□□□□ 0.36
USP11-207ENST00000478596 SHMT1P34896 483 aa17.33■□□□□ 0.36
USP11-207ENST00000478596 GJA9P57773 515 aa17.33■□□□□ 0.36
USP11-207ENST00000478596 IRX5P78411 483 aaPredicted RBP17.33■□□□□ 0.36
USP11-207ENST00000478596 SEPT2Q15019 361 aa17.33■□□□□ 0.36
USP11-207ENST00000478596 MAMDC4Q6UXC1 1216 aa17.33■□□□□ 0.36
USP11-207ENST00000478596 RIOX2Q8IUF8 465 aa17.33■□□□□ 0.36
USP11-207ENST00000478596 NOC4LQ9BVI4 516 aaKnown RBP17.33■□□□□ 0.36
USP11-207ENST00000478596 ADAMTS5Q9UNA0 930 aa17.33■□□□□ 0.36
USP11-207ENST00000478596 MYO5AQ9Y4I1 1855 aaKnown RBP17.33■□□□□ 0.36
USP11-207ENST00000478596 ZBBXA8MT70 800 aa17.32■□□□□ 0.36
USP11-207ENST00000478596 PDE4AP27815 886 aa17.32■□□□□ 0.36
USP11-207ENST00000478596 PDE1AP54750 535 aa17.32■□□□□ 0.36
USP11-207ENST00000478596 CCL23P55773 120 aa17.32■□□□□ 0.36
USP11-207ENST00000478596 NKX3-2P78367 333 aa17.32■□□□□ 0.36
USP11-207ENST00000478596 TAP1Q03518 808 aa17.32■□□□□ 0.36
USP11-207ENST00000478596 GRB10Q13322 594 aa17.32■□□□□ 0.36
USP11-207ENST00000478596 GNASQ5JWF2 1037 aa17.32■□□□□ 0.36
USP11-207ENST00000478596 KIAA1755Q5JYT7 1200 aa17.32■□□□□ 0.36
USP11-207ENST00000478596 TTC6Q86TZ1 520 aa17.32■□□□□ 0.36
USP11-207ENST00000478596 SKAP1Q86WV1 359 aa17.32■□□□□ 0.36
USP11-207ENST00000478596 ARNTL2Q8WYA1 636 aa17.32■□□□□ 0.36
USP11-207ENST00000478596 WNT8AQ9H1J5 351 aa17.32■□□□□ 0.36
USP11-207ENST00000478596 BOLA2Q9H3K6 86 aa17.32■□□□□ 0.36
USP11-207ENST00000478596 SNRKQ9NRH2 765 aa17.32■□□□□ 0.36
USP11-207ENST00000478596 CDK5RAP2Q96SN8 1893 aa17.32■□□□□ 0.36
USP11-207ENST00000478596 TRIM6-TRIM34B2RNG4 842 aa17.31■□□□□ 0.36
USP11-207ENST00000478596 LPXNO60711 386 aa17.31■□□□□ 0.36
USP11-207ENST00000478596 PFKMP08237 780 aa17.31■□□□□ 0.36
USP11-207ENST00000478596 CERS3Q8IU89 383 aa17.31■□□□□ 0.36
USP11-207ENST00000478596 PLEKHM2Q8IWE5 1019 aa17.31■□□□□ 0.36
USP11-207ENST00000478596 LMCD1Q9NZU5 365 aa17.31■□□□□ 0.36
USP11-207ENST00000478596 ZHX1Q9UKY1 873 aaPredicted RBP17.31■□□□□ 0.36
USP11-207ENST00000478596 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.3■□□□□ 0.36
USP11-207ENST00000478596 POTEB3A0JP26 581 aa17.3■□□□□ 0.36
USP11-207ENST00000478596 CTAGE5O15320 804 aa17.3■□□□□ 0.36
USP11-207ENST00000478596 ADCY6O43306 1168 aa17.3■□□□□ 0.36
USP11-207ENST00000478596 DCXO43602 365 aa17.3■□□□□ 0.36
USP11-207ENST00000478596 ATP5JP18859 108 aa17.3■□□□□ 0.36
USP11-207ENST00000478596 SSTR3P32745 418 aaPredicted RBP17.3■□□□□ 0.36
USP11-207ENST00000478596 COPB2P35606 906 aa17.3■□□□□ 0.36
USP11-207ENST00000478596 DYNLL1P63167 89 aaKnown RBP17.3■□□□□ 0.36
USP11-207ENST00000478596 LEXMQ3ZCV2 418 aa17.3■□□□□ 0.36
USP11-207ENST00000478596 POTEBQ6S5H4 581 aa17.3■□□□□ 0.36
USP11-207ENST00000478596 SEZ6LQ9BYH1 1024 aa17.3■□□□□ 0.36
USP11-207ENST00000478596 CFAP54Q96N23 3096 aa17.29■□□□□ 0.36
USP11-207ENST00000478596 GOLIM4O00461 696 aa17.29■□□□□ 0.36
USP11-207ENST00000478596 TTLL4Q14679 1199 aa17.29■□□□□ 0.36
USP11-207ENST00000478596 PHOSPHO2Q8TCD6 241 aa17.29■□□□□ 0.36
USP11-207ENST00000478596 SLC9A7Q96T83 725 aa17.29■□□□□ 0.36
USP11-207ENST00000478596 UBE2ZQ9H832 354 aaPredicted RBP17.29■□□□□ 0.36
USP11-207ENST00000478596 SALL3Q9BXA9 1300 aa17.28■□□□□ 0.36
USP11-207ENST00000478596 CABYRO75952 493 aa17.28■□□□□ 0.36
USP11-207ENST00000478596 ARHGEF15O94989 841 aa17.28■□□□□ 0.36
USP11-207ENST00000478596 STAT3P40763 770 aa17.28■□□□□ 0.36
USP11-207ENST00000478596 ZAP70P43403 619 aa17.28■□□□□ 0.36
USP11-207ENST00000478596 USP5P45974 858 aa17.28■□□□□ 0.36
USP11-207ENST00000478596 GABPAQ06546 454 aa17.28■□□□□ 0.36
USP11-207ENST00000478596 ACVR2BQ13705 512 aa17.28■□□□□ 0.36
USP11-207ENST00000478596 ZNF467Q7Z7K2 595 aaPredicted RBP17.28■□□□□ 0.36
USP11-207ENST00000478596 RILPL2Q969X0 211 aa17.28■□□□□ 0.36
USP11-207ENST00000478596 AGBL1Q96MI9 1066 aa17.28■□□□□ 0.36
USP11-207ENST00000478596 PAG1Q9NWQ8 432 aa17.28■□□□□ 0.36
USP11-207ENST00000478596 CYP2E1P05181 493 aaPredicted RBP17.27■□□□□ 0.36
USP11-207ENST00000478596 PLCD1P51178 756 aa17.27■□□□□ 0.36
USP11-207ENST00000478596 TTF1Q15361 905 aaPredicted RBP17.27■□□□□ 0.36
USP11-207ENST00000478596 CCDC144BQ3MJ40 725 aa17.27■□□□□ 0.36
USP11-207ENST00000478596 TTC22Q5TAA0 569 aa17.27■□□□□ 0.36
USP11-207ENST00000478596 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.27■□□□□ 0.36
USP11-207ENST00000478596 PI4K2BQ8TCG2 481 aa17.27■□□□□ 0.36
USP11-207ENST00000478596 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.27■□□□□ 0.36
USP11-207ENST00000478596 ZNF512BQ96KM6 892 aaPredicted RBP17.27■□□□□ 0.36
USP11-207ENST00000478596 PHOX2BQ99453 314 aa17.27■□□□□ 0.36
USP11-207ENST00000478596 FSD1Q9BTV5 496 aa17.27■□□□□ 0.36
USP11-207ENST00000478596 ABHD16BQ9H3Z7 469 aa17.27■□□□□ 0.36
USP11-207ENST00000478596 ZNF214Q9UL59 606 aaPredicted RBP17.27■□□□□ 0.36
USP11-207ENST00000478596 BRWD1Q9NSI6 2320 aa17.27■□□□□ 0.35
USP11-207ENST00000478596 ZNF318Q5VUA4 2279 aa17.26■□□□□ 0.35
USP11-207ENST00000478596 ZNFX1Q9P2E3 1918 aaKnown RBP17.26■□□□□ 0.35
USP11-207ENST00000478596 DNAJC25-GNG10A0A024R161 153 aa17.26■□□□□ 0.35
USP11-207ENST00000478596 WDR46O15213 610 aaKnown RBP17.26■□□□□ 0.35
USP11-207ENST00000478596 B4GALT4O60513 344 aa17.26■□□□□ 0.35
USP11-207ENST00000478596 IDH1O75874 414 aaKnown RBP17.26■□□□□ 0.35
USP11-207ENST00000478596 ITGA7Q13683 1181 aa17.26■□□□□ 0.35
USP11-207ENST00000478596 SAMD1Q6SPF0 538 aaPredicted RBP17.26■□□□□ 0.35
USP11-207ENST00000478596 SPICE1Q8N0Z3 855 aa17.26■□□□□ 0.35
USP11-207ENST00000478596 SCLYQ96I15 445 aa17.26■□□□□ 0.35
USP11-207ENST00000478596 MFSD14AQ96MC6 490 aa17.26■□□□□ 0.35
USP11-207ENST00000478596 HAUS7Q99871 368 aa17.26■□□□□ 0.35
USP11-207ENST00000478596 TRPV6Q9H1D0 765 aa17.26■□□□□ 0.35
USP11-207ENST00000478596 VCPKMTQ9H867 229 aa17.26■□□□□ 0.35
USP11-207ENST00000478596 TMX2Q9Y320 296 aa17.26■□□□□ 0.35
USP11-207ENST00000478596 GRIN2DO15399 1336 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms