RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 GGA3Q9NZ52 723 aa13.47□□□□□ -0.25
PCCB-214ENST00000478469 XRCC6P12956 609 aaKnown RBP eCLIP13.46□□□□□ -0.25
PCCB-214ENST00000478469 UBXN2AP68543 259 aa13.46□□□□□ -0.25
PCCB-214ENST00000478469 HSP90AA2PQ14568 343 aaPredicted RBP13.46□□□□□ -0.25
PCCB-214ENST00000478469 GLG1Q92896 1179 aa13.46□□□□□ -0.25
PCCB-214ENST00000478469 ADD3Q9UEY8 706 aaKnown RBP13.46□□□□□ -0.25
PCCB-214ENST00000478469 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.46□□□□□ -0.25
PCCB-214ENST00000478469 MAEAQ7L5Y9 396 aa13.46□□□□□ -0.25
PCCB-214ENST00000478469 TEKT3Q9BXF9 490 aa13.46□□□□□ -0.25
PCCB-214ENST00000478469 FTOQ9C0B1 505 aaKnown RBP eCLIP13.46□□□□□ -0.25
PCCB-214ENST00000478469 KIAA1468Q9P260 1216 aa13.46□□□□□ -0.26
PCCB-214ENST00000478469 MKRN3Q13064 507 aaKnown RBP13.45□□□□□ -0.26
PCCB-214ENST00000478469 UBE2SQ16763 222 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 ERCC4Q92889 916 aaPredicted RBP13.45□□□□□ -0.26
PCCB-214ENST00000478469 ARID3AQ99856 593 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 DEFB129Q9H1M3 183 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 HOXC10Q9NYD6 342 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 HACL1Q9UJ83 578 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 ANAPC4Q9UJX5 808 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 FAM208AQ9UK61 1670 aaKnown RBP13.45□□□□□ -0.26
PCCB-214ENST00000478469 POTEB2H3BUK9 544 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 PHACTR2O75167 634 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 ZNF445P59923 1031 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 SNAP25P60880 206 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 CRY2Q49AN0 593 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 PRPF38AQ8NAV1 312 aaKnown RBP13.45□□□□□ -0.26
PCCB-214ENST00000478469 SLF1Q9BQI6 1058 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 FEM1BQ9UK73 627 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 PNMA3Q9UL41 463 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 SALL1Q9NSC2 1324 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 CACNA1FO60840 1977 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 DPP9Q86TI2 863 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 SYMPKQ92797 1274 aaKnown RBP13.45□□□□□ -0.26
PCCB-214ENST00000478469 BLZF1Q9H2G9 400 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 ABT1Q9ULW3 272 aaKnown RBP13.45□□□□□ -0.26
PCCB-214ENST00000478469 ATRNO75882 1429 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 WTIPA6NIX2 430 aaPredicted RBP13.45□□□□□ -0.26
PCCB-214ENST00000478469 NDUFA8P51970 172 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 ANTXR2P58335 489 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 NLRP12P59046 1061 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 NFIAQ12857 509 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 GOLGA6L1Q8N7Z2 621 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 RTFDC1Q9BY42 306 aaPredicted RBP13.45□□□□□ -0.26
PCCB-214ENST00000478469 TMEM39BQ9GZU3 492 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 IFNKQ9P0W0 207 aa13.45□□□□□ -0.26
PCCB-214ENST00000478469 LRCH2Q5VUJ6 765 aa13.44□□□□□ -0.26
PCCB-214ENST00000478469 OTUD6AQ7L8S5 288 aa13.44□□□□□ -0.26
PCCB-214ENST00000478469 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.44□□□□□ -0.26
PCCB-214ENST00000478469 CSRNP2Q9H175 543 aa13.44□□□□□ -0.26
PCCB-214ENST00000478469 RABGAP1Q9Y3P9 1069 aa13.44□□□□□ -0.26
PCCB-214ENST00000478469 PNOCQ13519 176 aa13.44□□□□□ -0.26
PCCB-214ENST00000478469 KRBA2Q6ZNG9 492 aa13.44□□□□□ -0.26
PCCB-214ENST00000478469 CCDC186Q7Z3E2 898 aa13.44□□□□□ -0.26
PCCB-214ENST00000478469 STAG2Q8N3U4 1231 aa13.44□□□□□ -0.26
PCCB-214ENST00000478469 TTC12Q9H892 705 aaPredicted RBP13.44□□□□□ -0.26
PCCB-214ENST00000478469 NYAP2Q9P242 653 aa13.44□□□□□ -0.26
PCCB-214ENST00000478469 AKR1B10O60218 316 aa13.44□□□□□ -0.26
PCCB-214ENST00000478469 USO1O60763 962 aaKnown RBP13.44□□□□□ -0.26
PCCB-214ENST00000478469 CYP4A11Q02928 519 aa13.44□□□□□ -0.26
PCCB-214ENST00000478469 PAK1Q13153 545 aa13.44□□□□□ -0.26
PCCB-214ENST00000478469 CLEC10AQ8IUN9 316 aa13.44□□□□□ -0.26
PCCB-214ENST00000478469 MYCT1Q8N699 235 aa13.44□□□□□ -0.26
PCCB-214ENST00000478469 CSGALNACT2Q8N6G5 542 aa13.44□□□□□ -0.26
PCCB-214ENST00000478469 OTUD5Q96G74 571 aa13.44□□□□□ -0.26
PCCB-214ENST00000478469 AK8Q96MA6 479 aa13.44□□□□□ -0.26
PCCB-214ENST00000478469 ANO3Q9BYT9 981 aa13.44□□□□□ -0.26
PCCB-214ENST00000478469 CTNND2Q9UQB3 1225 aa13.44□□□□□ -0.26
PCCB-214ENST00000478469 PCDHB6Q9Y5E3 794 aa13.44□□□□□ -0.26
PCCB-214ENST00000478469 CETN3O15182 167 aa13.43□□□□□ -0.26
PCCB-214ENST00000478469 DESP17661 470 aa13.43□□□□□ -0.26
PCCB-214ENST00000478469 HOXA13P31271 388 aaPredicted RBP13.43□□□□□ -0.26
PCCB-214ENST00000478469 KIF22Q14807 665 aa13.43□□□□□ -0.26
PCCB-214ENST00000478469 PTPN14Q15678 1187 aa13.43□□□□□ -0.26
PCCB-214ENST00000478469 QRICH1Q2TAL8 776 aa13.43□□□□□ -0.26
PCCB-214ENST00000478469 CCDC181Q5TID7 509 aa13.43□□□□□ -0.26
PCCB-214ENST00000478469 CEP135Q66GS9 1140 aa13.43□□□□□ -0.26
PCCB-214ENST00000478469 KIF2AO00139 706 aaPredicted RBP13.43□□□□□ -0.26
PCCB-214ENST00000478469 CCDC112Q8NEF3 446 aa13.43□□□□□ -0.26
PCCB-214ENST00000478469 IMPG2Q9BZV3 1241 aa13.43□□□□□ -0.26
PCCB-214ENST00000478469 SCAF8Q9UPN6 1271 aaKnown RBP13.43□□□□□ -0.26
PCCB-214ENST00000478469 CCDC172P0C7W6 258 aa13.43□□□□□ -0.26
PCCB-214ENST00000478469 ADGRA1Q86SQ6 560 aa13.43□□□□□ -0.26
PCCB-214ENST00000478469 AKT1S1Q96B36 256 aa13.43□□□□□ -0.26
PCCB-214ENST00000478469 VPS33BQ9H267 617 aa13.43□□□□□ -0.26
PCCB-214ENST00000478469 GINS2Q9Y248 185 aa13.43□□□□□ -0.26
PCCB-214ENST00000478469 SPDYE2BA6NHP3 402 aa13.43□□□□□ -0.26
PCCB-214ENST00000478469 SPDYE6P0CI01 402 aa13.43□□□□□ -0.26
PCCB-214ENST00000478469 AP3B2Q13367 1082 aa13.43□□□□□ -0.26
PCCB-214ENST00000478469 KARSQ15046 597 aaKnown RBP13.43□□□□□ -0.26
PCCB-214ENST00000478469 C9orf131Q5VYM1 1079 aa13.43□□□□□ -0.26
PCCB-214ENST00000478469 GPBP1Q86WP2 473 aa13.43□□□□□ -0.26
PCCB-214ENST00000478469 PSMD1Q99460 953 aa13.43□□□□□ -0.26
PCCB-214ENST00000478469 ZNF577Q9BSK1 485 aa13.43□□□□□ -0.26
PCCB-214ENST00000478469 WDR11Q9BZH6 1224 aa13.43□□□□□ -0.26
PCCB-214ENST00000478469 ARGLU1Q9NWB6 273 aaPredicted RBP13.43□□□□□ -0.26
PCCB-214ENST00000478469 NOD1Q9Y239 953 aa13.43□□□□□ -0.26
PCCB-214ENST00000478469 FRMD4BQ9Y2L6 1034 aa13.43□□□□□ -0.26
PCCB-214ENST00000478469 NFE2L3Q9Y4A8 694 aa13.43□□□□□ -0.26
PCCB-214ENST00000478469 RASSF7Q02833 373 aa13.42□□□□□ -0.26
PCCB-214ENST00000478469 UBXN1Q04323 297 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms