RNA–Protein interactions for RNA: ENST00000478274.6

SCP2-209, Transcript of sterol carrier protein 2, humanhuman

TSL 2

Gene SCP2, Length 969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-209ENST00000478274 SNHG28P0DPA3 235 aa12.78□□□□□ -0.36
SCP2-209ENST00000478274 TM4SF4P48230 202 aa12.78□□□□□ -0.36
SCP2-209ENST00000478274 USH1GQ495M9 461 aa12.78□□□□□ -0.36
SCP2-209ENST00000478274 SH3D19Q5HYK7 790 aa12.78□□□□□ -0.36
SCP2-209ENST00000478274 ADGRF4Q8IZF3 695 aa12.78□□□□□ -0.36
SCP2-209ENST00000478274 CPXCR1Q8N123 301 aa12.78□□□□□ -0.36
SCP2-209ENST00000478274 SRBD1Q8N5C6 995 aaKnown RBP12.78□□□□□ -0.36
SCP2-209ENST00000478274 NSUN7Q8NE18 718 aaKnown RBP12.78□□□□□ -0.36
SCP2-209ENST00000478274 C12orf42Q96LP6 360 aa12.78□□□□□ -0.36
SCP2-209ENST00000478274 PIGSQ96S52 555 aa12.78□□□□□ -0.36
SCP2-209ENST00000478274 ALG1Q9BT22 464 aa12.78□□□□□ -0.36
SCP2-209ENST00000478274 V9GY48 417 aaPredicted RBP12.78□□□□□ -0.36
SCP2-209ENST00000478274 NID2Q14112 1375 aa12.78□□□□□ -0.36
SCP2-209ENST00000478274 PDHXO00330 501 aa12.77□□□□□ -0.37
SCP2-209ENST00000478274 IFNAR1P17181 557 aa12.77□□□□□ -0.37
SCP2-209ENST00000478274 NAPAP54920 295 aa12.77□□□□□ -0.37
SCP2-209ENST00000478274 WDR78Q5VTH9 848 aa12.77□□□□□ -0.37
SCP2-209ENST00000478274 PRPF38AQ8NAV1 312 aaKnown RBP12.77□□□□□ -0.37
SCP2-209ENST00000478274 ATG4CQ96DT6 458 aa12.77□□□□□ -0.37
SCP2-209ENST00000478274 PARK7Q99497 189 aaKnown RBP12.77□□□□□ -0.37
SCP2-209ENST00000478274 SPZ1Q9BXG8 430 aa12.77□□□□□ -0.37
SCP2-209ENST00000478274 RNF26Q9BY78 433 aaPredicted RBP12.77□□□□□ -0.37
SCP2-209ENST00000478274 PRR12Q9ULL5 1215 aa12.77□□□□□ -0.37
SCP2-209ENST00000478274 GPR25O00155 361 aa12.76□□□□□ -0.37
SCP2-209ENST00000478274 PDCP20941 246 aa12.76□□□□□ -0.37
SCP2-209ENST00000478274 GUCY1B3Q02153 619 aa12.76□□□□□ -0.37
SCP2-209ENST00000478274 ST3GAL1Q11201 340 aa12.76□□□□□ -0.37
SCP2-209ENST00000478274 CUL4AQ13619 759 aa12.76□□□□□ -0.37
SCP2-209ENST00000478274 COG2Q14746 738 aa12.76□□□□□ -0.37
SCP2-209ENST00000478274 SAFBQ15424 915 aaKnown RBP eCLIP12.76□□□□□ -0.37
SCP2-209ENST00000478274 NOM1Q5C9Z4 860 aaKnown RBP12.76□□□□□ -0.37
SCP2-209ENST00000478274 MCTP1Q6DN14 999 aa12.76□□□□□ -0.37
SCP2-209ENST00000478274 CATSPERGQ6ZRH7 1159 aa12.76□□□□□ -0.37
SCP2-209ENST00000478274 FBXO11Q86XK2 927 aa12.76□□□□□ -0.37
SCP2-209ENST00000478274 CCDC12Q8WUD4 166 aaPredicted RBP12.76□□□□□ -0.37
SCP2-209ENST00000478274 BRI3BPQ8WY22 251 aa12.76□□□□□ -0.37
SCP2-209ENST00000478274 GPKOWQ92917 476 aaPredicted RBP eCLIP12.76□□□□□ -0.37
SCP2-209ENST00000478274 INTS4Q96HW7 963 aaKnown RBP12.76□□□□□ -0.37
SCP2-209ENST00000478274 C8orf76Q96K31 380 aa12.76□□□□□ -0.37
SCP2-209ENST00000478274 BRMS1Q9HCU9 246 aa12.76□□□□□ -0.37
SCP2-209ENST00000478274 HOMER2Q9NSB8 354 aa12.76□□□□□ -0.37
SCP2-209ENST00000478274 CCPG1Q9ULG6 757 aa12.76□□□□□ -0.37
SCP2-209ENST00000478274 PPP1R9AQ9ULJ8 1098 aa12.76□□□□□ -0.37
SCP2-209ENST00000478274 STK36Q9NRP7 1315 aa12.76□□□□□ -0.37
SCP2-209ENST00000478274 BTBD19C9JJ37 291 aa12.75□□□□□ -0.37
SCP2-209ENST00000478274 ZBTB5O15062 677 aa12.75□□□□□ -0.37
SCP2-209ENST00000478274 PRPF3O43395 683 aaKnown RBP12.75□□□□□ -0.37
SCP2-209ENST00000478274 SCG2P13521 617 aa12.75□□□□□ -0.37
SCP2-209ENST00000478274 NLRP5P59047 1200 aa12.75□□□□□ -0.37
SCP2-209ENST00000478274 TRAF1Q13077 416 aa12.75□□□□□ -0.37
SCP2-209ENST00000478274 TAF1CQ15572 869 aaPredicted RBP12.75□□□□□ -0.37
SCP2-209ENST00000478274 QRICH1Q2TAL8 776 aa12.75□□□□□ -0.37
SCP2-209ENST00000478274 FOXD4L5Q5VV16 416 aaPredicted RBP12.75□□□□□ -0.37
SCP2-209ENST00000478274 LARP1BQ659C4 914 aaKnown RBP12.75□□□□□ -0.37
SCP2-209ENST00000478274 ANKRD23Q86SG2 305 aa12.75□□□□□ -0.37
SCP2-209ENST00000478274 NBPF11Q86T75 865 aa12.75□□□□□ -0.37
SCP2-209ENST00000478274 CCDC148Q8NFR7 591 aa12.75□□□□□ -0.37
SCP2-209ENST00000478274 PHIPQ8WWQ0 1821 aa12.75□□□□□ -0.37
SCP2-209ENST00000478274 FOXD4L4Q8WXT5 416 aaPredicted RBP12.75□□□□□ -0.37
SCP2-209ENST00000478274 ASCC2Q9H1I8 757 aaPredicted RBP12.75□□□□□ -0.37
SCP2-209ENST00000478274 JMJD4Q9H9V9 463 aa12.75□□□□□ -0.37
SCP2-209ENST00000478274 RAVER2Q9HCJ3 691 aaKnown RBP12.75□□□□□ -0.37
SCP2-209ENST00000478274 FAM217BQ9NTX9 383 aaPredicted RBP12.75□□□□□ -0.37
SCP2-209ENST00000478274 HOXC10Q9NYD6 342 aa12.75□□□□□ -0.37
SCP2-209ENST00000478274 PNMA6FA0A0J9YX94 578 aa12.74□□□□□ -0.37
SCP2-209ENST00000478274 ECM2O94769 699 aaPredicted RBP12.74□□□□□ -0.37
SCP2-209ENST00000478274 CTDNEP1O95476 244 aa12.74□□□□□ -0.37
SCP2-209ENST00000478274 CYP2C8P10632 490 aa12.74□□□□□ -0.37
SCP2-209ENST00000478274 ALAS1P13196 640 aa12.74□□□□□ -0.37
SCP2-209ENST00000478274 DSG3P32926 999 aa12.74□□□□□ -0.37
SCP2-209ENST00000478274 FBXO46Q6PJ61 603 aaPredicted RBP12.74□□□□□ -0.37
SCP2-209ENST00000478274 AMNQ9BXJ7 453 aa12.74□□□□□ -0.37
SCP2-209ENST00000478274 VPS54Q9P1Q0 977 aa12.74□□□□□ -0.37
SCP2-209ENST00000478274 PDE4DIPQ5VU43 2346 aa12.74□□□□□ -0.37
SCP2-209ENST00000478274 LOC285556D6RIA3 1793 aa12.74□□□□□ -0.37
SCP2-209ENST00000478274 CYTH3O43739 400 aa12.73□□□□□ -0.37
SCP2-209ENST00000478274 FKTNO75072 461 aa12.73□□□□□ -0.37
SCP2-209ENST00000478274 FDX1P10109 184 aa12.73□□□□□ -0.37
SCP2-209ENST00000478274 SMARCA1P28370 1054 aa12.73□□□□□ -0.37
SCP2-209ENST00000478274 INHBEP58166 350 aa12.73□□□□□ -0.37
SCP2-209ENST00000478274 HERVK_113P62684 666 aa12.73□□□□□ -0.37
SCP2-209ENST00000478274 NTRK3Q16288 839 aa12.73□□□□□ -0.37
SCP2-209ENST00000478274 PFKFB3Q16875 520 aaPredicted RBP12.73□□□□□ -0.37
SCP2-209ENST00000478274 SNRNP48Q6IEG0 339 aaKnown RBP12.73□□□□□ -0.37
SCP2-209ENST00000478274 BTNL9Q6UXG8 535 aa12.73□□□□□ -0.37
SCP2-209ENST00000478274 FAM43AQ8N2R8 423 aa12.73□□□□□ -0.37
SCP2-209ENST00000478274 GTF3C2Q8WUA4 911 aaPredicted RBP12.73□□□□□ -0.37
SCP2-209ENST00000478274 CUL5Q93034 780 aa12.73□□□□□ -0.37
SCP2-209ENST00000478274 COA7Q96BR5 231 aa12.73□□□□□ -0.37
SCP2-209ENST00000478274 MS4A4AQ96JQ5 239 aa12.73□□□□□ -0.37
SCP2-209ENST00000478274 AIFM3Q96NN9 605 aa12.73□□□□□ -0.37
SCP2-209ENST00000478274 P2RX7Q99572 595 aaKnown RBP12.73□□□□□ -0.37
SCP2-209ENST00000478274 CFHR5Q9BXR6 569 aa12.73□□□□□ -0.37
SCP2-209ENST00000478274 RIOX1Q9H6W3 641 aa12.73□□□□□ -0.37
SCP2-209ENST00000478274 ZFYVE28Q9HCC9 887 aa12.73□□□□□ -0.37
SCP2-209ENST00000478274 PCDHA1Q9Y5I3 950 aa12.73□□□□□ -0.37
SCP2-209ENST00000478274 MYPNQ86TC9 1320 aa12.72□□□□□ -0.37
SCP2-209ENST00000478274 SPDYE16A6NNV3 312 aaPredicted RBP12.72□□□□□ -0.37
SCP2-209ENST00000478274 VWA5AO00534 786 aa12.72□□□□□ -0.37
SCP2-209ENST00000478274 PLA2G6O60733 806 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms