RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 RNF41Q9H4P4 317 aaPredicted RBP16.25■□□□□ 0.19
RCC1-211ENST00000478232 ACAD9Q9H845 621 aa16.25■□□□□ 0.19
RCC1-211ENST00000478232 DIAPH3Q9NSV4 1193 aa16.25■□□□□ 0.19
RCC1-211ENST00000478232 PRR12Q9ULL5 1215 aa16.25■□□□□ 0.19
RCC1-211ENST00000478232 ZNF536O15090 1300 aa16.24■□□□□ 0.19
RCC1-211ENST00000478232 ALPK3Q96L96 1907 aa16.24■□□□□ 0.19
RCC1-211ENST00000478232 MYH4Q9Y623 1939 aa16.24■□□□□ 0.19
RCC1-211ENST00000478232 ZNF213O14771 459 aa16.24■□□□□ 0.19
RCC1-211ENST00000478232 NT5C2P49902 561 aa16.24■□□□□ 0.19
RCC1-211ENST00000478232 HAND2P61296 217 aa16.24■□□□□ 0.19
RCC1-211ENST00000478232 CWC27Q6UX04 472 aaKnown RBP16.24■□□□□ 0.19
RCC1-211ENST00000478232 AGBL1Q96MI9 1066 aa16.24■□□□□ 0.19
RCC1-211ENST00000478232 LBHD1Q9BQE6 289 aaPredicted RBP16.24■□□□□ 0.19
RCC1-211ENST00000478232 TMEM47Q9BQJ4 181 aa16.24■□□□□ 0.19
RCC1-211ENST00000478232 UBE2OQ9C0C9 1292 aaKnown RBP16.24■□□□□ 0.19
RCC1-211ENST00000478232 ABHD16BQ9H3Z7 469 aa16.24■□□□□ 0.19
RCC1-211ENST00000478232 PRKAG2Q9UGJ0 569 aa16.24■□□□□ 0.19
RCC1-211ENST00000478232 PHF24Q9UPV7 400 aa16.24■□□□□ 0.19
RCC1-211ENST00000478232 RANBP2P49792 3224 aaKnown RBP16.23■□□□□ 0.19
RCC1-211ENST00000478232 PGK1P00558 417 aa16.23■□□□□ 0.19
RCC1-211ENST00000478232 RTP1P59025 263 aa16.23■□□□□ 0.19
RCC1-211ENST00000478232 ACVR2BQ13705 512 aa16.23■□□□□ 0.19
RCC1-211ENST00000478232 C1orf53Q5VUE5 145 aa16.23■□□□□ 0.19
RCC1-211ENST00000478232 BTNL9Q6UXG8 535 aa16.23■□□□□ 0.19
RCC1-211ENST00000478232 FERMT2Q96AC1 680 aa16.23■□□□□ 0.19
RCC1-211ENST00000478232 TRERF1Q96PN7 1200 aa16.23■□□□□ 0.19
RCC1-211ENST00000478232 HOMER2Q9NSB8 354 aa16.23■□□□□ 0.19
RCC1-211ENST00000478232 RNF146Q9NTX7 359 aa16.23■□□□□ 0.19
RCC1-211ENST00000478232 MTMR7Q9Y216 660 aa16.23■□□□□ 0.19
RCC1-211ENST00000478232 ATP11BQ9Y2G3 1177 aa16.23■□□□□ 0.19
RCC1-211ENST00000478232 POTEB2H3BUK9 544 aa16.22■□□□□ 0.19
RCC1-211ENST00000478232 ALAS1P13196 640 aa16.22■□□□□ 0.19
RCC1-211ENST00000478232 SNX17Q15036 470 aa16.22■□□□□ 0.19
RCC1-211ENST00000478232 CCDC96Q2M329 555 aa16.22■□□□□ 0.19
RCC1-211ENST00000478232 TDHQ8IZJ6 230 aa16.22■□□□□ 0.19
RCC1-211ENST00000478232 FAM133AQ8N9E0 248 aa16.22■□□□□ 0.19
RCC1-211ENST00000478232 ESR2Q92731 530 aa16.22■□□□□ 0.19
RCC1-211ENST00000478232 TSEN34Q9BSV6 310 aaKnown RBP16.22■□□□□ 0.19
RCC1-211ENST00000478232 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.22■□□□□ 0.19
RCC1-211ENST00000478232 DUSP11O75319 330 aaKnown RBP16.21■□□□□ 0.19
RCC1-211ENST00000478232 MDM2Q00987 491 aaPredicted RBP16.21■□□□□ 0.19
RCC1-211ENST00000478232 LRIT3Q3SXY7 679 aa16.21■□□□□ 0.19
RCC1-211ENST00000478232 CCDC178Q5BJE1 867 aa16.21■□□□□ 0.19
RCC1-211ENST00000478232 TTBK2Q6IQ55 1244 aa16.21■□□□□ 0.19
RCC1-211ENST00000478232 CCDC174Q6PII3 467 aa16.21■□□□□ 0.19
RCC1-211ENST00000478232 FGD4Q96M96 766 aa16.21■□□□□ 0.19
RCC1-211ENST00000478232 A1CFQ9NQ94 594 aaKnown RBP16.21■□□□□ 0.19
RCC1-211ENST00000478232 CTNNA3Q9UI47 895 aa16.21■□□□□ 0.19
RCC1-211ENST00000478232 ZHX1Q9UKY1 873 aaPredicted RBP16.21■□□□□ 0.19
RCC1-211ENST00000478232 PNMA2Q9UL42 364 aa16.21■□□□□ 0.19
RCC1-211ENST00000478232 ASB14A6NK59 587 aa16.2■□□□□ 0.18
RCC1-211ENST00000478232 ADAMTS4O75173 837 aa16.2■□□□□ 0.18
RCC1-211ENST00000478232 ICAM1P05362 532 aa16.2■□□□□ 0.18
RCC1-211ENST00000478232 SNAP25P60880 206 aa16.2■□□□□ 0.18
RCC1-211ENST00000478232 CNTN2Q02246 1040 aa16.2■□□□□ 0.18
RCC1-211ENST00000478232 SYDE2Q5VT97 1194 aa16.2■□□□□ 0.18
RCC1-211ENST00000478232 ARMCX2Q7L311 632 aa16.2■□□□□ 0.18
RCC1-211ENST00000478232 DGKHQ86XP1 1220 aa16.2■□□□□ 0.18
RCC1-211ENST00000478232 TBC1D10CQ8IV04 446 aa16.2■□□□□ 0.18
RCC1-211ENST00000478232 CCDC144CPQ8IYA2 1237 aa16.2■□□□□ 0.18
RCC1-211ENST00000478232 KLHDC9Q8NEP7 349 aa16.2■□□□□ 0.18
RCC1-211ENST00000478232 DSCC1Q9BVC3 393 aa16.2■□□□□ 0.18
RCC1-211ENST00000478232 RANBP17Q9H2T7 1088 aaKnown RBP16.2■□□□□ 0.18
RCC1-211ENST00000478232 GPCPD1Q9NPB8 672 aa16.2■□□□□ 0.18
RCC1-211ENST00000478232 CCPG1Q9ULG6 757 aa16.2■□□□□ 0.18
RCC1-211ENST00000478232 FRMPD3Q5JV73 1810 aa16.19■□□□□ 0.18
RCC1-211ENST00000478232 SOWAHBA6NEL2 793 aa16.19■□□□□ 0.18
RCC1-211ENST00000478232 SOX1O00570 391 aaPredicted RBP16.19■□□□□ 0.18
RCC1-211ENST00000478232 PDHBP11177 359 aa16.19■□□□□ 0.18
RCC1-211ENST00000478232 SLC16A2P36021 539 aa16.19■□□□□ 0.18
RCC1-211ENST00000478232 ACLYP53396 1101 aa16.19■□□□□ 0.18
RCC1-211ENST00000478232 TLE2Q04725 743 aa16.19■□□□□ 0.18
RCC1-211ENST00000478232 CCDC144BQ3MJ40 725 aa16.19■□□□□ 0.18
RCC1-211ENST00000478232 TRIM60Q495X7 471 aa16.19■□□□□ 0.18
RCC1-211ENST00000478232 GPR153Q6NV75 609 aa16.19■□□□□ 0.18
RCC1-211ENST00000478232 RASGRP2Q7LDG7 609 aa16.19■□□□□ 0.18
RCC1-211ENST00000478232 NUP133Q8WUM0 1156 aa16.19■□□□□ 0.18
RCC1-211ENST00000478232 SPC25Q9HBM1 224 aa16.19■□□□□ 0.18
RCC1-211ENST00000478232 SMCHD1A6NHR9 2005 aa16.19■□□□□ 0.18
RCC1-211ENST00000478232 MOXD2PA6NHM9 499 aa16.18■□□□□ 0.18
RCC1-211ENST00000478232 ZNF543Q08ER8 600 aa16.18■□□□□ 0.18
RCC1-211ENST00000478232 KCNA10Q16322 511 aa16.18■□□□□ 0.18
RCC1-211ENST00000478232 IMMTQ16891 758 aaKnown RBP16.18■□□□□ 0.18
RCC1-211ENST00000478232 MUM1L1Q5H9M0 696 aa16.18■□□□□ 0.18
RCC1-211ENST00000478232 IQCA1Q86XH1 822 aa16.18■□□□□ 0.18
RCC1-211ENST00000478232 PCSK9Q8NBP7 692 aaKnown RBP16.18■□□□□ 0.18
RCC1-211ENST00000478232 ANKS1AQ92625 1134 aa16.18■□□□□ 0.18
RCC1-211ENST00000478232 LRCH3Q96II8 777 aa16.18■□□□□ 0.18
RCC1-211ENST00000478232 CYP39A1Q9NYL5 469 aa16.18■□□□□ 0.18
RCC1-211ENST00000478232 PLXNA1Q9UIW2 1896 aa16.18■□□□□ 0.18
RCC1-211ENST00000478232 FRMPD2Q68DX3 1309 aaPredicted RBP16.18■□□□□ 0.18
RCC1-211ENST00000478232 SYNRGQ9UMZ2 1314 aa16.18■□□□□ 0.18
RCC1-211ENST00000478232 A0A1W2PQ45 241 aaPredicted RBP16.17■□□□□ 0.18
RCC1-211ENST00000478232 A0A1W2PQY0 241 aa16.17■□□□□ 0.18
RCC1-211ENST00000478232 SNHG28P0DPA3 235 aa16.17■□□□□ 0.18
RCC1-211ENST00000478232 PDE4AP27815 886 aa16.17■□□□□ 0.18
RCC1-211ENST00000478232 CST5P28325 142 aaPredicted RBP16.17■□□□□ 0.18
RCC1-211ENST00000478232 GJA9P57773 515 aa16.17■□□□□ 0.18
RCC1-211ENST00000478232 GPATCH4Q5T3I0 446 aaKnown RBP16.17■□□□□ 0.18
RCC1-211ENST00000478232 CCSAPQ6IQ19 270 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms