RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 PRDM11Q9NQV5 511 aa5.81□□□□□ -1.48
SF3B6-202ENST00000478050 HELLSQ9NRZ9 838 aa5.81□□□□□ -1.48
SF3B6-202ENST00000478050 ATG3Q9NT62 314 aa5.81□□□□□ -1.48
SF3B6-202ENST00000478050 ZKSCAN5Q9Y2L8 839 aa5.81□□□□□ -1.48
SF3B6-202ENST00000478050 PCNTO95613 3336 aa5.81□□□□□ -1.48
SF3B6-202ENST00000478050 AKAP11Q9UKA4 1901 aa5.81□□□□□ -1.48
SF3B6-202ENST00000478050 ABCC12Q96J65 1359 aa5.8□□□□□ -1.48
SF3B6-202ENST00000478050 GOLGB1Q14789 3259 aaKnown RBP5.8□□□□□ -1.48
SF3B6-202ENST00000478050 COL14A1Q05707 1796 aaKnown RBP5.8□□□□□ -1.48
SF3B6-202ENST00000478050 MYO5AQ9Y4I1 1855 aaKnown RBP5.8□□□□□ -1.48
SF3B6-202ENST00000478050 USP17L3A6NCW0 530 aa5.8□□□□□ -1.48
SF3B6-202ENST00000478050 USP17L4A6NCW7 530 aa5.8□□□□□ -1.48
SF3B6-202ENST00000478050 EYA2O00167 538 aa5.8□□□□□ -1.48
SF3B6-202ENST00000478050 PPP1R12BO60237 982 aaPredicted RBP5.8□□□□□ -1.48
SF3B6-202ENST00000478050 IL2RBP14784 551 aa5.8□□□□□ -1.48
SF3B6-202ENST00000478050 PIP4K2AP48426 406 aaPredicted RBP5.8□□□□□ -1.48
SF3B6-202ENST00000478050 TERF1P54274 439 aa5.8□□□□□ -1.48
SF3B6-202ENST00000478050 GP2P55259 537 aaKnown RBP5.8□□□□□ -1.48
SF3B6-202ENST00000478050 DNM1Q05193 864 aaKnown RBP5.8□□□□□ -1.48
SF3B6-202ENST00000478050 TOB2Q14106 344 aaPredicted RBP5.8□□□□□ -1.48
SF3B6-202ENST00000478050 USP17L2Q6R6M4 530 aa5.8□□□□□ -1.48
SF3B6-202ENST00000478050 TTLL7Q6ZT98 887 aa5.8□□□□□ -1.48
SF3B6-202ENST00000478050 SND1Q7KZF4 910 aaKnown RBP eCLIP5.8□□□□□ -1.48
SF3B6-202ENST00000478050 USP17L1Q7RTZ2 530 aa5.8□□□□□ -1.48
SF3B6-202ENST00000478050 ATG9AQ7Z3C6 839 aa5.8□□□□□ -1.48
SF3B6-202ENST00000478050 DEPDC4Q8N2C3 294 aa5.8□□□□□ -1.48
SF3B6-202ENST00000478050 NECAB1Q8N987 351 aa5.8□□□□□ -1.48
SF3B6-202ENST00000478050 RNF214Q8ND24 703 aa5.8□□□□□ -1.48
SF3B6-202ENST00000478050 STK32AQ8WU08 396 aa5.8□□□□□ -1.48
SF3B6-202ENST00000478050 JARID2Q92833 1246 aaPredicted RBP5.8□□□□□ -1.48
SF3B6-202ENST00000478050 GTF3C6Q969F1 213 aa5.8□□□□□ -1.48
SF3B6-202ENST00000478050 DNAJC2Q99543 621 aaKnown RBP5.8□□□□□ -1.48
SF3B6-202ENST00000478050 LLPHQ9BRT6 129 aaKnown RBP5.8□□□□□ -1.48
SF3B6-202ENST00000478050 DSCC1Q9BVC3 393 aa5.8□□□□□ -1.48
SF3B6-202ENST00000478050 SCAND2PQ9GZW5 306 aaPredicted RBP5.8□□□□□ -1.48
SF3B6-202ENST00000478050 PAG1Q9NWQ8 432 aa5.8□□□□□ -1.48
SF3B6-202ENST00000478050 FRRS1LQ9P0K9 344 aa5.8□□□□□ -1.48
SF3B6-202ENST00000478050 NOVA2Q9UNW9 492 aaKnown RBP5.8□□□□□ -1.48
SF3B6-202ENST00000478050 KIF3AQ9Y496 699 aa5.8□□□□□ -1.48
SF3B6-202ENST00000478050 OAS3Q9Y6K5 1087 aaKnown RBP5.8□□□□□ -1.48
SF3B6-202ENST00000478050 KAT6BQ8WYB5 2073 aa5.79□□□□□ -1.48
SF3B6-202ENST00000478050 DOCK2Q92608 1830 aa5.79□□□□□ -1.48
SF3B6-202ENST00000478050 USP17L5A8MUK1 530 aa5.79□□□□□ -1.48
SF3B6-202ENST00000478050 GSC2O15499 205 aa5.79□□□□□ -1.48
SF3B6-202ENST00000478050 PTMAP06454 111 aaKnown RBP5.79□□□□□ -1.48
SF3B6-202ENST00000478050 IFIT1P09914 478 aaKnown RBP5.79□□□□□ -1.48
SF3B6-202ENST00000478050 CCDC192P0DO97 292 aa5.79□□□□□ -1.48
SF3B6-202ENST00000478050 LBX1P52954 281 aa5.79□□□□□ -1.48
SF3B6-202ENST00000478050 TMEM164Q5U3C3 297 aa5.79□□□□□ -1.48
SF3B6-202ENST00000478050 Q6ZUG5 572 aa5.79□□□□□ -1.48
SF3B6-202ENST00000478050 DDX46Q7L014 1031 aaKnown RBP5.79□□□□□ -1.48
SF3B6-202ENST00000478050 CDC37L1Q7L3B6 337 aa5.79□□□□□ -1.48
SF3B6-202ENST00000478050 ALDH16A1Q8IZ83 802 aa5.79□□□□□ -1.48
SF3B6-202ENST00000478050 DDX54Q8TDD1 881 aaKnown RBP5.79□□□□□ -1.48
SF3B6-202ENST00000478050 EDC3Q96F86 508 aaKnown RBP5.79□□□□□ -1.48
SF3B6-202ENST00000478050 NEUROD6Q96NK8 337 aa5.79□□□□□ -1.48
SF3B6-202ENST00000478050 FUCA2Q9BTY2 467 aa5.79□□□□□ -1.48
SF3B6-202ENST00000478050 ISCA1Q9BUE6 129 aa5.79□□□□□ -1.48
SF3B6-202ENST00000478050 PLA2G12BQ9BX93 195 aa5.79□□□□□ -1.48
SF3B6-202ENST00000478050 TEX13AQ9BXU3 409 aaPredicted RBP5.79□□□□□ -1.48
SF3B6-202ENST00000478050 ZSCAN16Q9H4T2 348 aaPredicted RBP5.79□□□□□ -1.48
SF3B6-202ENST00000478050 DDX19AQ9NUU7 478 aaKnown RBP5.79□□□□□ -1.48
SF3B6-202ENST00000478050 ZMIZ1Q9ULJ6 1067 aa5.79□□□□□ -1.48
SF3B6-202ENST00000478050 AKAP2Q9Y2D5 859 aa5.79□□□□□ -1.48
SF3B6-202ENST00000478050 LAMB2P55268 1798 aa5.79□□□□□ -1.48
SF3B6-202ENST00000478050 C4AP0C0L4 1744 aa5.79□□□□□ -1.48
SF3B6-202ENST00000478050 C4BP0C0L5 1744 aa5.79□□□□□ -1.48
SF3B6-202ENST00000478050 ECM29Q5VYK3 1845 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 PITPNM2Q9BZ72 1349 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 GOLGA6L4A6NEF3 574 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 GOLIM4O00461 696 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 RNF113AO15541 343 aaKnown RBP5.78□□□□□ -1.48
SF3B6-202ENST00000478050 PFKFB2O60825 505 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 ALX3O95076 343 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 A1BGP04217 495 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 PCCAP05165 728 aaPredicted RBP5.78□□□□□ -1.48
SF3B6-202ENST00000478050 TPM3P06753 285 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 ZFYP08048 801 aaPredicted RBP5.78□□□□□ -1.48
SF3B6-202ENST00000478050 CYP21A2P08686 494 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 HSP90B1P14625 803 aaKnown RBP5.78□□□□□ -1.48
SF3B6-202ENST00000478050 ATP1A2P50993 1020 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 EVA1CP58658 441 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 HMGN5P82970 282 aaKnown RBP5.78□□□□□ -1.48
SF3B6-202ENST00000478050 RESTQ13127 1097 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 TCIRG1Q13488 830 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 GRIK5Q16478 980 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 MAP3K11Q16584 847 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 HSP90AB3PQ58FF7 597 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 PERM1Q5SV97 790 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 CCDC102BQ68D86 513 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 ATL3Q6DD88 541 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 NAA16Q6N069 864 aaPredicted RBP5.78□□□□□ -1.48
SF3B6-202ENST00000478050 KIF6Q6ZMV9 814 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 CCDC129Q6ZRS4 1044 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 DHX32Q7L7V1 743 aaKnown RBP5.78□□□□□ -1.48
SF3B6-202ENST00000478050 TTC6Q86TZ1 520 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 SMARCC2Q8TAQ2 1214 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 SPATA32Q96LK8 384 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 LPIN3Q9BQK8 851 aa5.78□□□□□ -1.48
SF3B6-202ENST00000478050 AGXT2Q9BYV1 514 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms