RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 CCDC120Q96HB5 630 aa7.28□□□□□ -1.24
VPS50-214ENST00000477935 ADAMTS10Q9H324 1103 aa7.28□□□□□ -1.24
VPS50-214ENST00000477935 CHST7Q9NS84 486 aa7.28□□□□□ -1.24
VPS50-214ENST00000477935 ABCA8O94911 1581 aa7.28□□□□□ -1.24
VPS50-214ENST00000477935 ZNF335Q9H4Z2 1342 aaPredicted RBP7.27□□□□□ -1.24
VPS50-214ENST00000477935 NCOA1Q15788 1441 aa7.27□□□□□ -1.24
VPS50-214ENST00000477935 TRAPPC8Q9Y2L5 1435 aa7.27□□□□□ -1.24
VPS50-214ENST00000477935 EFCAB5A4FU69 1503 aa7.27□□□□□ -1.25
VPS50-214ENST00000477935 ARHGEF12Q9NZN5 1544 aa7.27□□□□□ -1.25
VPS50-214ENST00000477935 SSBP05455 408 aaKnown RBP eCLIP7.27□□□□□ -1.25
VPS50-214ENST00000477935 TEKQ02763 1124 aa7.27□□□□□ -1.25
VPS50-214ENST00000477935 PHAXQ9H814 394 aaKnown RBP7.27□□□□□ -1.25
VPS50-214ENST00000477935 PRR13Q9NZ81 148 aa7.27□□□□□ -1.25
VPS50-214ENST00000477935 PCDHB10Q9UN67 800 aa7.27□□□□□ -1.25
VPS50-214ENST00000477935 ATP10BO94823 1461 aa7.27□□□□□ -1.25
VPS50-214ENST00000477935 FRMPD1Q5SYB0 1578 aa7.27□□□□□ -1.25
VPS50-214ENST00000477935 ATP10AO60312 1499 aa7.26□□□□□ -1.25
VPS50-214ENST00000477935 MEIS1O00470 390 aa7.26□□□□□ -1.25
VPS50-214ENST00000477935 FGRP09769 529 aa7.26□□□□□ -1.25
VPS50-214ENST00000477935 ARID5AQ03989 594 aa7.26□□□□□ -1.25
VPS50-214ENST00000477935 ANKRD39Q53RE8 183 aa7.26□□□□□ -1.25
VPS50-214ENST00000477935 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.26□□□□□ -1.25
VPS50-214ENST00000477935 FOXP3Q9BZS1 431 aa7.26□□□□□ -1.25
VPS50-214ENST00000477935 TCFL5Q9UL49 500 aa7.26□□□□□ -1.25
VPS50-214ENST00000477935 MRVI1Q9Y6F6 885 aa7.26□□□□□ -1.25
VPS50-214ENST00000477935 ZFYVE16Q7Z3T8 1539 aa7.26□□□□□ -1.25
VPS50-214ENST00000477935 PLEKHD1A6NEE1 506 aa7.25□□□□□ -1.25
VPS50-214ENST00000477935 ZGLP1P0C6A0 271 aa7.25□□□□□ -1.25
VPS50-214ENST00000477935 CD247P20963 164 aa7.25□□□□□ -1.25
VPS50-214ENST00000477935 DNAJA1P31689 397 aaKnown RBP7.25□□□□□ -1.25
VPS50-214ENST00000477935 CTSKP43235 329 aa7.25□□□□□ -1.25
VPS50-214ENST00000477935 HK2P52789 917 aa7.25□□□□□ -1.25
VPS50-214ENST00000477935 PCBP3P57721 371 aaKnown RBP7.25□□□□□ -1.25
VPS50-214ENST00000477935 GNPTABQ3T906 1256 aa7.25□□□□□ -1.25
VPS50-214ENST00000477935 RNF111Q6ZNA4 994 aa7.25□□□□□ -1.25
VPS50-214ENST00000477935 SLC43A3Q8NBI5 491 aa7.25□□□□□ -1.25
VPS50-214ENST00000477935 SYTL4Q96C24 671 aaPredicted RBP7.25□□□□□ -1.25
VPS50-214ENST00000477935 ASIC4Q96FT7 647 aa7.25□□□□□ -1.25
VPS50-214ENST00000477935 GP6Q9HCN6 339 aa7.25□□□□□ -1.25
VPS50-214ENST00000477935 RAPGEF2Q9Y4G8 1499 aa7.24□□□□□ -1.25
VPS50-214ENST00000477935 FER1L4A9Z1Z3 1794 aa7.24□□□□□ -1.25
VPS50-214ENST00000477935 ZMYM4Q5VZL5 1548 aa7.24□□□□□ -1.25
VPS50-214ENST00000477935 PAX4O43316 350 aa7.24□□□□□ -1.25
VPS50-214ENST00000477935 AFMP43652 599 aa7.24□□□□□ -1.25
VPS50-214ENST00000477935 SLC7A5Q01650 507 aa7.24□□□□□ -1.25
VPS50-214ENST00000477935 MCF2L2Q86YR7 1114 aa7.24□□□□□ -1.25
VPS50-214ENST00000477935 LINC00116Q8NCU8 138 aa7.24□□□□□ -1.25
VPS50-214ENST00000477935 FAM168AQ92567 244 aa7.24□□□□□ -1.25
VPS50-214ENST00000477935 HAUS7Q99871 368 aa7.24□□□□□ -1.25
VPS50-214ENST00000477935 DSCC1Q9BVC3 393 aa7.24□□□□□ -1.25
VPS50-214ENST00000477935 RGS17Q9UGC6 210 aaPredicted RBP7.24□□□□□ -1.25
VPS50-214ENST00000477935 ZNF281Q9Y2X9 895 aa7.24□□□□□ -1.25
VPS50-214ENST00000477935 ZNF451Q9Y4E5 1061 aa7.24□□□□□ -1.25
VPS50-214ENST00000477935 SSU72P8A0A1W2PR75 194 aa7.23□□□□□ -1.25
VPS50-214ENST00000477935 TMEM82A0PJX8 343 aa7.23□□□□□ -1.25
VPS50-214ENST00000477935 SMAD7O15105 426 aaKnown RBP7.23□□□□□ -1.25
VPS50-214ENST00000477935 CBFA2T2O43439 604 aa7.23□□□□□ -1.25
VPS50-214ENST00000477935 SYPP08247 313 aa7.23□□□□□ -1.25
VPS50-214ENST00000477935 RPL10P27635 214 aaKnown RBP7.23□□□□□ -1.25
VPS50-214ENST00000477935 ZNF445P59923 1031 aa7.23□□□□□ -1.25
VPS50-214ENST00000477935 ERVFC1P60507 584 aa7.23□□□□□ -1.25
VPS50-214ENST00000477935 ZC3H6P61129 1189 aaKnown RBP7.23□□□□□ -1.25
VPS50-214ENST00000477935 NOL9Q5SY16 702 aaKnown RBP7.23□□□□□ -1.25
VPS50-214ENST00000477935 FYB2Q5VWT5 728 aa7.23□□□□□ -1.25
VPS50-214ENST00000477935 ZSWIM9Q86XI8 627 aa7.23□□□□□ -1.25
VPS50-214ENST00000477935 KLHL6Q8WZ60 621 aa7.23□□□□□ -1.25
VPS50-214ENST00000477935 DHX38Q92620 1227 aaKnown RBP7.23□□□□□ -1.25
VPS50-214ENST00000477935 BRF1Q92994 677 aa7.23□□□□□ -1.25
VPS50-214ENST00000477935 GMLQ99445 158 aa7.23□□□□□ -1.25
VPS50-214ENST00000477935 EBF1Q9UH73 591 aa7.23□□□□□ -1.25
VPS50-214ENST00000477935 C9orf84Q5VXU9 1444 aa7.23□□□□□ -1.25
VPS50-214ENST00000477935 PTPRKQ15262 1439 aa7.22□□□□□ -1.25
VPS50-214ENST00000477935 FKTNO75072 461 aa7.22□□□□□ -1.25
VPS50-214ENST00000477935 HPXP02790 462 aa7.22□□□□□ -1.25
VPS50-214ENST00000477935 GSNP06396 782 aa7.22□□□□□ -1.25
VPS50-214ENST00000477935 ITGA4P13612 1032 aa7.22□□□□□ -1.25
VPS50-214ENST00000477935 BMP8BP34820 402 aa7.22□□□□□ -1.25
VPS50-214ENST00000477935 ETFBP38117 255 aa7.22□□□□□ -1.25
VPS50-214ENST00000477935 TCEAL1Q15170 157 aa7.22□□□□□ -1.25
VPS50-214ENST00000477935 TNNI3KQ59H18 835 aa7.22□□□□□ -1.25
VPS50-214ENST00000477935 VHLLQ6RSH7 139 aa7.22□□□□□ -1.25
VPS50-214ENST00000477935 CRTC3Q6UUV7 619 aa7.22□□□□□ -1.25
VPS50-214ENST00000477935 WAPLQ7Z5K2 1190 aa7.22□□□□□ -1.25
VPS50-214ENST00000477935 PDZD8Q8NEN9 1154 aa7.22□□□□□ -1.25
VPS50-214ENST00000477935 KIRREL1Q96J84 757 aa7.22□□□□□ -1.25
VPS50-214ENST00000477935 ZNF408Q9H9D4 720 aa7.22□□□□□ -1.25
VPS50-214ENST00000477935 RNF114Q9Y508 228 aa7.22□□□□□ -1.25
VPS50-214ENST00000477935 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.22□□□□□ -1.25
VPS50-214ENST00000477935 RAC2P15153 192 aa7.21□□□□□ -1.26
VPS50-214ENST00000477935 DUSP4Q13115 394 aa7.21□□□□□ -1.26
VPS50-214ENST00000477935 KCNMB1Q16558 191 aa7.21□□□□□ -1.26
VPS50-214ENST00000477935 NAALADL2Q58DX5 795 aa7.21□□□□□ -1.26
VPS50-214ENST00000477935 HEATR6Q6AI08 1181 aaKnown RBP7.21□□□□□ -1.26
VPS50-214ENST00000477935 KIAA1211LQ6NV74 962 aa7.21□□□□□ -1.26
VPS50-214ENST00000477935 FIBCD1Q8N539 461 aa7.21□□□□□ -1.26
VPS50-214ENST00000477935 OXR1Q8N573 874 aa7.21□□□□□ -1.26
VPS50-214ENST00000477935 LINC01599Q8WXQ3 324 aa7.21□□□□□ -1.26
VPS50-214ENST00000477935 G6PC3Q9BUM1 346 aa7.21□□□□□ -1.26
VPS50-214ENST00000477935 KLHL25Q9H0H3 589 aa7.21□□□□□ -1.26
VPS50-214ENST00000477935 SP110Q9HB58 689 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms