RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 CENPBP07199 599 aaPredicted RBP16.61■□□□□ 0.25
PDE6D-204ENST00000477748 FDX1P10109 184 aa16.61■□□□□ 0.25
PDE6D-204ENST00000477748 KCTD2Q14681 263 aa16.61■□□□□ 0.25
PDE6D-204ENST00000477748 CCDC178Q5BJE1 867 aa16.61■□□□□ 0.25
PDE6D-204ENST00000477748 BMP2KLQ5H9B9 411 aa16.61■□□□□ 0.25
PDE6D-204ENST00000477748 RASGRP2Q7LDG7 609 aa16.61■□□□□ 0.25
PDE6D-204ENST00000477748 TRPV1Q8NER1 839 aa16.61■□□□□ 0.25
PDE6D-204ENST00000477748 MAML3Q96JK9 1138 aa16.61■□□□□ 0.25
PDE6D-204ENST00000477748 CNNM2Q9H8M5 875 aa16.61■□□□□ 0.25
PDE6D-204ENST00000477748 RAVER2Q9HCJ3 691 aaKnown RBP16.61■□□□□ 0.25
PDE6D-204ENST00000477748 ATP2A1O14983 1001 aa16.6■□□□□ 0.25
PDE6D-204ENST00000477748 SEPT4O43236 478 aa16.6■□□□□ 0.25
PDE6D-204ENST00000477748 PLA2G6O60733 806 aa16.6■□□□□ 0.25
PDE6D-204ENST00000477748 BMP8BP34820 402 aa16.6■□□□□ 0.25
PDE6D-204ENST00000477748 KIAA1211Q6ZU35 1233 aa16.6■□□□□ 0.25
PDE6D-204ENST00000477748 DGKHQ86XP1 1220 aa16.6■□□□□ 0.25
PDE6D-204ENST00000477748 ARRDC4Q8NCT1 418 aa16.6■□□□□ 0.25
PDE6D-204ENST00000477748 GDF15Q99988 308 aa16.6■□□□□ 0.25
PDE6D-204ENST00000477748 ZSWIM5Q9P217 1185 aa16.6■□□□□ 0.25
PDE6D-204ENST00000477748 ZMYND8Q9ULU4 1186 aaPredicted RBP16.6■□□□□ 0.25
PDE6D-204ENST00000477748 DIS3Q9Y2L1 958 aaKnown RBP16.6■□□□□ 0.25
PDE6D-204ENST00000477748 RIPK3Q9Y572 518 aa16.6■□□□□ 0.25
PDE6D-204ENST00000477748 PLXNA1Q9UIW2 1896 aa16.59■□□□□ 0.25
PDE6D-204ENST00000477748 CYP21A2P08686 494 aa16.59■□□□□ 0.25
PDE6D-204ENST00000477748 OAZ1P54368 228 aa16.59■□□□□ 0.25
PDE6D-204ENST00000477748 TRDNQ13061 729 aa16.59■□□□□ 0.25
PDE6D-204ENST00000477748 PRR12Q9ULL5 1215 aa16.59■□□□□ 0.25
PDE6D-204ENST00000477748 FRMPD2Q68DX3 1309 aaPredicted RBP16.59■□□□□ 0.25
PDE6D-204ENST00000477748 FRMPD3Q5JV73 1810 aa16.59■□□□□ 0.25
PDE6D-204ENST00000477748 A0A0C4DFX4 3053 aa16.59■□□□□ 0.25
PDE6D-204ENST00000477748 COL6A3P12111 3177 aa16.59■□□□□ 0.25
PDE6D-204ENST00000477748 PGK2P07205 417 aa16.58■□□□□ 0.24
PDE6D-204ENST00000477748 PDHBP11177 359 aa16.58■□□□□ 0.24
PDE6D-204ENST00000477748 LRRC26Q2I0M4 334 aa16.58■□□□□ 0.24
PDE6D-204ENST00000477748 TTBK2Q6IQ55 1244 aa16.58■□□□□ 0.24
PDE6D-204ENST00000477748 MAP4K1Q92918 833 aa16.58■□□□□ 0.24
PDE6D-204ENST00000477748 ZSCAN10Q96SZ4 725 aaPredicted RBP16.58■□□□□ 0.24
PDE6D-204ENST00000477748 ESYT1Q9BSJ8 1104 aa16.58■□□□□ 0.24
PDE6D-204ENST00000477748 UBAC1Q9BSL1 405 aa16.58■□□□□ 0.24
PDE6D-204ENST00000477748 SENP6Q9GZR1 1112 aaPredicted RBP16.58■□□□□ 0.24
PDE6D-204ENST00000477748 GPCPD1Q9NPB8 672 aa16.58■□□□□ 0.24
PDE6D-204ENST00000477748 TNKSO95271 1327 aa16.57■□□□□ 0.24
PDE6D-204ENST00000477748 KBTBD13C9JR72 458 aa16.57■□□□□ 0.24
PDE6D-204ENST00000477748 SLC16A2P36021 539 aa16.57■□□□□ 0.24
PDE6D-204ENST00000477748 SNAP25P60880 206 aa16.57■□□□□ 0.24
PDE6D-204ENST00000477748 ZNF792Q3KQV3 632 aa16.57■□□□□ 0.24
PDE6D-204ENST00000477748 CCDC174Q6PII3 467 aa16.57■□□□□ 0.24
PDE6D-204ENST00000477748 MSL3Q8N5Y2 521 aaKnown RBP16.57■□□□□ 0.24
PDE6D-204ENST00000477748 PNMA1Q8ND90 353 aa16.57■□□□□ 0.24
PDE6D-204ENST00000477748 ANKS1AQ92625 1134 aa16.57■□□□□ 0.24
PDE6D-204ENST00000477748 DDX11Q96FC9 970 aa16.57■□□□□ 0.24
PDE6D-204ENST00000477748 KAT14Q9H8E8 782 aa16.57■□□□□ 0.24
PDE6D-204ENST00000477748 FBXO40Q9UH90 709 aa16.57■□□□□ 0.24
PDE6D-204ENST00000477748 RBM8AQ9Y5S9 174 aaKnown RBP16.57■□□□□ 0.24
PDE6D-204ENST00000477748 SYN1P17600 705 aa16.56■□□□□ 0.24
PDE6D-204ENST00000477748 MAGEA10P43363 369 aaPredicted RBP16.56■□□□□ 0.24
PDE6D-204ENST00000477748 ZNF543Q08ER8 600 aa16.56■□□□□ 0.24
PDE6D-204ENST00000477748 SYDE2Q5VT97 1194 aa16.56■□□□□ 0.24
PDE6D-204ENST00000477748 BTNL9Q6UXG8 535 aa16.56■□□□□ 0.24
PDE6D-204ENST00000477748 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.56■□□□□ 0.24
PDE6D-204ENST00000477748 RALYLQ86SE5 291 aaKnown RBP16.56■□□□□ 0.24
PDE6D-204ENST00000477748 ENAHQ8N8S7 591 aaPredicted RBP16.56■□□□□ 0.24
PDE6D-204ENST00000477748 CHST13Q8NET6 341 aa16.56■□□□□ 0.24
PDE6D-204ENST00000477748 AGBL1Q96MI9 1066 aa16.56■□□□□ 0.24
PDE6D-204ENST00000477748 TINF2Q9BSI4 451 aa16.56■□□□□ 0.24
PDE6D-204ENST00000477748 HOMER2Q9NSB8 354 aa16.56■□□□□ 0.24
PDE6D-204ENST00000477748 ZNF536O15090 1300 aa16.55■□□□□ 0.24
PDE6D-204ENST00000477748 E7EWF7 191 aa16.55■□□□□ 0.24
PDE6D-204ENST00000477748 SNHG28P0DPA3 235 aa16.55■□□□□ 0.24
PDE6D-204ENST00000477748 ALAS1P13196 640 aa16.55■□□□□ 0.24
PDE6D-204ENST00000477748 CASC1Q6TDU7 716 aa16.55■□□□□ 0.24
PDE6D-204ENST00000477748 CYB5R4Q7L1T6 521 aa16.55■□□□□ 0.24
PDE6D-204ENST00000477748 ANKRD35Q8N283 1001 aa16.55■□□□□ 0.24
PDE6D-204ENST00000477748 NCOA7Q8NI08 942 aa16.55■□□□□ 0.24
PDE6D-204ENST00000477748 LSG1Q9H089 658 aaKnown RBP16.55■□□□□ 0.24
PDE6D-204ENST00000477748 ANO2Q9NQ90 1003 aa16.55■□□□□ 0.24
PDE6D-204ENST00000477748 CNPY2Q9Y2B0 182 aa16.55■□□□□ 0.24
PDE6D-204ENST00000477748 SYNGAP1Q96PV0 1343 aa16.54■□□□□ 0.24
PDE6D-204ENST00000477748 CDC45O75419 566 aa16.54■□□□□ 0.24
PDE6D-204ENST00000477748 GOLGA8HP0CJ92 632 aa16.54■□□□□ 0.24
PDE6D-204ENST00000477748 RARBP10826 455 aa16.54■□□□□ 0.24
PDE6D-204ENST00000477748 TKFCQ3LXA3 575 aa16.54■□□□□ 0.24
PDE6D-204ENST00000477748 PRAMEF19Q5SWL8 479 aa16.54■□□□□ 0.24
PDE6D-204ENST00000477748 GPATCH4Q5T3I0 446 aaKnown RBP16.54■□□□□ 0.24
PDE6D-204ENST00000477748 GJC2Q5T442 439 aaPredicted RBP16.54■□□□□ 0.24
PDE6D-204ENST00000477748 IFIT1BQ5T764 474 aaKnown RBP16.54■□□□□ 0.24
PDE6D-204ENST00000477748 RANBP17Q9H2T7 1088 aaKnown RBP16.54■□□□□ 0.24
PDE6D-204ENST00000477748 ACAD9Q9H845 621 aa16.54■□□□□ 0.24
PDE6D-204ENST00000477748 RNF146Q9NTX7 359 aa16.54■□□□□ 0.24
PDE6D-204ENST00000477748 CCPG1Q9ULG6 757 aa16.54■□□□□ 0.24
PDE6D-204ENST00000477748 TAF6LQ9Y6J9 622 aa16.54■□□□□ 0.24
PDE6D-204ENST00000477748 SMCHD1A6NHR9 2005 aa16.53■□□□□ 0.24
PDE6D-204ENST00000477748 AKR1A1P14550 325 aa16.53■□□□□ 0.24
PDE6D-204ENST00000477748 LRRC41Q15345 812 aa16.53■□□□□ 0.24
PDE6D-204ENST00000477748 SEC23AQ15436 765 aa16.53■□□□□ 0.24
PDE6D-204ENST00000477748 ANO1Q5XXA6 986 aa16.53■□□□□ 0.24
PDE6D-204ENST00000477748 STOX1Q6ZVD7 989 aa16.53■□□□□ 0.24
PDE6D-204ENST00000477748 ZNF467Q7Z7K2 595 aaPredicted RBP16.53■□□□□ 0.24
PDE6D-204ENST00000477748 TDHQ8IZJ6 230 aa16.53■□□□□ 0.24
PDE6D-204ENST00000477748 TRERF1Q96PN7 1200 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms