RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-210ENST00000477625 SNHG28P0DPA3 235 aa14.38□□□□□ -0.11
PTPN7-210ENST00000477625 SLC16A2P36021 539 aa14.38□□□□□ -0.11
PTPN7-210ENST00000477625 SNAP25P60880 206 aa14.38□□□□□ -0.11
PTPN7-210ENST00000477625 PTH1RQ03431 593 aa14.38□□□□□ -0.11
PTPN7-210ENST00000477625 CCDC174Q6PII3 467 aa14.38□□□□□ -0.11
PTPN7-210ENST00000477625 MSL3Q8N5Y2 521 aaKnown RBP14.38□□□□□ -0.11
PTPN7-210ENST00000477625 ACAD9Q9H845 621 aa14.38□□□□□ -0.11
PTPN7-210ENST00000477625 HOMER2Q9NSB8 354 aa14.38□□□□□ -0.11
PTPN7-210ENST00000477625 U3KPZ7 1027 aaPredicted RBP14.38□□□□□ -0.11
PTPN7-210ENST00000477625 ICAM1P05362 532 aa14.37□□□□□ -0.11
PTPN7-210ENST00000477625 COL6A1P12109 1028 aa14.37□□□□□ -0.11
PTPN7-210ENST00000477625 ALAS1P13196 640 aa14.37□□□□□ -0.11
PTPN7-210ENST00000477625 ZNF543Q08ER8 600 aa14.37□□□□□ -0.11
PTPN7-210ENST00000477625 SYDE2Q5VT97 1194 aa14.37□□□□□ -0.11
PTPN7-210ENST00000477625 MAMDC4Q6UXC1 1216 aa14.37□□□□□ -0.11
PTPN7-210ENST00000477625 ZNF467Q7Z7K2 595 aaPredicted RBP14.37□□□□□ -0.11
PTPN7-210ENST00000477625 ENAHQ8N8S7 591 aaPredicted RBP14.37□□□□□ -0.11
PTPN7-210ENST00000477625 TRERF1Q96PN7 1200 aa14.37□□□□□ -0.11
PTPN7-210ENST00000477625 RANBP17Q9H2T7 1088 aaKnown RBP14.37□□□□□ -0.11
PTPN7-210ENST00000477625 KAT14Q9H8E8 782 aa14.37□□□□□ -0.11
PTPN7-210ENST00000477625 RNF146Q9NTX7 359 aa14.37□□□□□ -0.11
PTPN7-210ENST00000477625 LAMA4Q16363 1823 aa14.36□□□□□ -0.11
PTPN7-210ENST00000477625 CYP21A2P08686 494 aa14.36□□□□□ -0.11
PTPN7-210ENST00000477625 TRDNQ13061 729 aa14.36□□□□□ -0.11
PTPN7-210ENST00000477625 GPATCH4Q5T3I0 446 aaKnown RBP14.36□□□□□ -0.11
PTPN7-210ENST00000477625 ARRDC4Q8NCT1 418 aa14.36□□□□□ -0.11
PTPN7-210ENST00000477625 PNMA1Q8ND90 353 aa14.36□□□□□ -0.11
PTPN7-210ENST00000477625 MAP4K1Q92918 833 aa14.36□□□□□ -0.11
PTPN7-210ENST00000477625 UBAC1Q9BSL1 405 aa14.36□□□□□ -0.11
PTPN7-210ENST00000477625 CCPG1Q9ULG6 757 aa14.36□□□□□ -0.11
PTPN7-210ENST00000477625 CNPY2Q9Y2B0 182 aa14.36□□□□□ -0.11
PTPN7-210ENST00000477625 CEP290O15078 2479 aa14.36□□□□□ -0.11
PTPN7-210ENST00000477625 TNKSO95271 1327 aa14.36□□□□□ -0.11
PTPN7-210ENST00000477625 SYNGAP1Q96PV0 1343 aa14.36□□□□□ -0.11
PTPN7-210ENST00000477625 POTEB2H3BUK9 544 aa14.35□□□□□ -0.11
PTPN7-210ENST00000477625 DNM1LO00429 736 aa14.35□□□□□ -0.11
PTPN7-210ENST00000477625 SNAI1O95863 264 aaPredicted RBP14.35□□□□□ -0.11
PTPN7-210ENST00000477625 ZNF865P0CJ78 1059 aaPredicted RBP14.35□□□□□ -0.11
PTPN7-210ENST00000477625 TAL1P17542 331 aaPredicted RBP14.35□□□□□ -0.11
PTPN7-210ENST00000477625 ANO1Q5XXA6 986 aa14.35□□□□□ -0.11
PTPN7-210ENST00000477625 A1CFQ9NQ94 594 aaKnown RBP14.35□□□□□ -0.11
PTPN7-210ENST00000477625 PFASO15067 1338 aa14.35□□□□□ -0.11
PTPN7-210ENST00000477625 GOLGA8HP0CJ92 632 aa14.34□□□□□ -0.11
PTPN7-210ENST00000477625 RARBP10826 455 aa14.34□□□□□ -0.11
PTPN7-210ENST00000477625 CNTN2Q02246 1040 aa14.34□□□□□ -0.11
PTPN7-210ENST00000477625 BMP2KLQ5H9B9 411 aa14.34□□□□□ -0.11
PTPN7-210ENST00000477625 MUM1L1Q5H9M0 696 aa14.34□□□□□ -0.11
PTPN7-210ENST00000477625 GJC2Q5T442 439 aaPredicted RBP14.34□□□□□ -0.11
PTPN7-210ENST00000477625 IFIT1BQ5T764 474 aaKnown RBP14.34□□□□□ -0.11
PTPN7-210ENST00000477625 KIAA1211Q6ZU35 1233 aa14.34□□□□□ -0.11
PTPN7-210ENST00000477625 CYB5R4Q7L1T6 521 aa14.34□□□□□ -0.11
PTPN7-210ENST00000477625 SKAP1Q86WV1 359 aa14.34□□□□□ -0.11
PTPN7-210ENST00000477625 FAM133AQ8N9E0 248 aa14.34□□□□□ -0.11
PTPN7-210ENST00000477625 FGD4Q96M96 766 aa14.34□□□□□ -0.11
PTPN7-210ENST00000477625 PNMA2Q9UL42 364 aa14.34□□□□□ -0.11
PTPN7-210ENST00000477625 PLXNA1Q9UIW2 1896 aa14.33□□□□□ -0.11
PTPN7-210ENST00000477625 E7EWF7 191 aa14.33□□□□□ -0.12
PTPN7-210ENST00000477625 AKR1A1P14550 325 aa14.33□□□□□ -0.12
PTPN7-210ENST00000477625 SEC23AQ15436 765 aa14.33□□□□□ -0.12
PTPN7-210ENST00000477625 CCDC136Q96JN2 1154 aa14.33□□□□□ -0.12
PTPN7-210ENST00000477625 ESYT1Q9BSJ8 1104 aa14.33□□□□□ -0.12
PTPN7-210ENST00000477625 SENP6Q9GZR1 1112 aaPredicted RBP14.33□□□□□ -0.12
PTPN7-210ENST00000477625 UBA5Q9GZZ9 404 aa14.33□□□□□ -0.12
PTPN7-210ENST00000477625 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.33□□□□□ -0.12
PTPN7-210ENST00000477625 CYP39A1Q9NYL5 469 aa14.33□□□□□ -0.12
PTPN7-210ENST00000477625 FAM184BQ9ULE4 1060 aa14.33□□□□□ -0.12
PTPN7-210ENST00000477625 COLQQ9Y215 455 aaPredicted RBP14.33□□□□□ -0.12
PTPN7-210ENST00000477625 SOWAHBA6NEL2 793 aa14.32□□□□□ -0.12
PTPN7-210ENST00000477625 KBTBD13C9JR72 458 aa14.32□□□□□ -0.12
PTPN7-210ENST00000477625 MYCNP04198 464 aaPredicted RBP14.32□□□□□ -0.12
PTPN7-210ENST00000477625 PARP1P09874 1014 aaKnown RBP14.32□□□□□ -0.12
PTPN7-210ENST00000477625 ACVR2BQ13705 512 aa14.32□□□□□ -0.12
PTPN7-210ENST00000477625 ASPRV1Q53RT3 343 aa14.32□□□□□ -0.12
PTPN7-210ENST00000477625 ARMCX2Q7L311 632 aa14.32□□□□□ -0.12
PTPN7-210ENST00000477625 RALYLQ86SE5 291 aaKnown RBP14.32□□□□□ -0.12
PTPN7-210ENST00000477625 CCDC144CPQ8IYA2 1237 aa14.32□□□□□ -0.12
PTPN7-210ENST00000477625 C7orf61Q8IZ16 206 aa14.32□□□□□ -0.12
PTPN7-210ENST00000477625 NCOA7Q8NI08 942 aa14.32□□□□□ -0.12
PTPN7-210ENST00000477625 LSG1Q9H089 658 aaKnown RBP14.32□□□□□ -0.12
PTPN7-210ENST00000477625 ABHD16BQ9H3Z7 469 aa14.32□□□□□ -0.12
PTPN7-210ENST00000477625 XPNPEP3Q9NQH7 507 aa14.32□□□□□ -0.12
PTPN7-210ENST00000477625 RBM8AQ9Y5S9 174 aaKnown RBP14.32□□□□□ -0.12
PTPN7-210ENST00000477625 TAF6LQ9Y6J9 622 aa14.32□□□□□ -0.12
PTPN7-210ENST00000477625 ASB14A6NK59 587 aa14.31□□□□□ -0.12
PTPN7-210ENST00000477625 LRRC41Q15345 812 aa14.31□□□□□ -0.12
PTPN7-210ENST00000477625 LRRC26Q2I0M4 334 aa14.31□□□□□ -0.12
PTPN7-210ENST00000477625 HABP4Q5JVS0 413 aaKnown RBP14.31□□□□□ -0.12
PTPN7-210ENST00000477625 NSMFQ6X4W1 530 aa14.31□□□□□ -0.12
PTPN7-210ENST00000477625 STOX1Q6ZVD7 989 aa14.31□□□□□ -0.12
PTPN7-210ENST00000477625 RNF180Q86T96 592 aa14.31□□□□□ -0.12
PTPN7-210ENST00000477625 ADGRF4Q8IZF3 695 aa14.31□□□□□ -0.12
PTPN7-210ENST00000477625 CPVLQ9H3G5 476 aa14.31□□□□□ -0.12
PTPN7-210ENST00000477625 ZHX1Q9UKY1 873 aaPredicted RBP14.31□□□□□ -0.12
PTPN7-210ENST00000477625 WDR19Q8NEZ3 1342 aa14.31□□□□□ -0.12
PTPN7-210ENST00000477625 FRMPD3Q5JV73 1810 aa14.3□□□□□ -0.12
PTPN7-210ENST00000477625 ERICH2A1L162 156 aa14.3□□□□□ -0.12
PTPN7-210ENST00000477625 NFIBO00712 420 aa14.3□□□□□ -0.12
PTPN7-210ENST00000477625 IFIT3O14879 490 aaKnown RBP14.3□□□□□ -0.12
PTPN7-210ENST00000477625 PGK1P00558 417 aa14.3□□□□□ -0.12
PTPN7-210ENST00000477625 BAATQ14032 418 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms