RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 DNAJC7Q99615 494 aa20.33■□□□□ 0.85
CCM2-209ENST00000477605 ANKZF1Q9H8Y5 726 aa20.33■□□□□ 0.85
CCM2-209ENST00000477605 KBTBD4Q9NVX7 518 aa20.33■□□□□ 0.85
CCM2-209ENST00000477605 EPN1Q9Y6I3 576 aaPredicted RBP20.33■□□□□ 0.85
CCM2-209ENST00000477605 MAST2Q6P0Q8 1798 aa20.33■□□□□ 0.84
CCM2-209ENST00000477605 NHSQ6T4R5 1651 aa20.33■□□□□ 0.84
CCM2-209ENST00000477605 PSMA7O14818 248 aa20.33■□□□□ 0.84
CCM2-209ENST00000477605 OAS2P29728 719 aaKnown RBP20.33■□□□□ 0.84
CCM2-209ENST00000477605 PRDX5P30044 214 aa20.33■□□□□ 0.84
CCM2-209ENST00000477605 TSR1Q2NL82 804 aaKnown RBP20.33■□□□□ 0.84
CCM2-209ENST00000477605 IRF2BP1Q8IU81 584 aa20.33■□□□□ 0.84
CCM2-209ENST00000477605 AMOTL1Q8IY63 956 aa20.33■□□□□ 0.84
CCM2-209ENST00000477605 HAUS4Q9H6D7 363 aa20.33■□□□□ 0.84
CCM2-209ENST00000477605 GDAQ9Y2T3 454 aa20.33■□□□□ 0.84
CCM2-209ENST00000477605 RGPD3A6NKT7 1758 aaPredicted RBP20.33■□□□□ 0.84
CCM2-209ENST00000477605 RGPD4Q7Z3J3 1758 aa20.33■□□□□ 0.84
CCM2-209ENST00000477605 COL5A3P25940 1745 aaPredicted RBP20.32■□□□□ 0.84
CCM2-209ENST00000477605 FAM205AQ6ZU69 1335 aa20.32■□□□□ 0.84
CCM2-209ENST00000477605 CTAGE15A4D2H0 777 aa20.32■□□□□ 0.84
CCM2-209ENST00000477605 CTAGE8P0CG41 777 aa20.32■□□□□ 0.84
CCM2-209ENST00000477605 VEGFAP15692 232 aaPredicted RBP20.32■□□□□ 0.84
CCM2-209ENST00000477605 KLRK1P26718 216 aa20.32■□□□□ 0.84
CCM2-209ENST00000477605 UBA7P41226 1012 aa20.32■□□□□ 0.84
CCM2-209ENST00000477605 GSTO1P78417 241 aa20.32■□□□□ 0.84
CCM2-209ENST00000477605 NAALADL2Q58DX5 795 aa20.32■□□□□ 0.84
CCM2-209ENST00000477605 HDXQ7Z353 690 aa20.32■□□□□ 0.84
CCM2-209ENST00000477605 CTAGE6Q86UF2 777 aa20.32■□□□□ 0.84
CCM2-209ENST00000477605 DZIP1Q86YF9 867 aaKnown RBP20.32■□□□□ 0.84
CCM2-209ENST00000477605 CTAGE4Q8IX94 777 aa20.32■□□□□ 0.84
CCM2-209ENST00000477605 TXLNBQ8N3L3 684 aa20.32■□□□□ 0.84
CCM2-209ENST00000477605 RETREG2Q8NC44 543 aa20.32■□□□□ 0.84
CCM2-209ENST00000477605 LINC00116Q8NCU8 138 aa20.32■□□□□ 0.84
CCM2-209ENST00000477605 GIMAP8Q8ND71 665 aaPredicted RBP20.32■□□□□ 0.84
CCM2-209ENST00000477605 ZNF507Q8TCN5 953 aa20.32■□□□□ 0.84
CCM2-209ENST00000477605 CCDC47Q96A33 483 aaKnown RBP20.32■□□□□ 0.84
CCM2-209ENST00000477605 IL17RBQ9NRM6 502 aa20.32■□□□□ 0.84
CCM2-209ENST00000477605 CAPN11Q9UMQ6 739 aa20.32■□□□□ 0.84
CCM2-209ENST00000477605 PCDHA6Q9UN73 950 aa20.32■□□□□ 0.84
CCM2-209ENST00000477605 LUC7L2Q9Y383 392 aaKnown RBP20.32■□□□□ 0.84
CCM2-209ENST00000477605 PCDHA8Q9Y5H6 950 aa20.32■□□□□ 0.84
CCM2-209ENST00000477605 KIAA1551Q9HCM1 1747 aa20.32■□□□□ 0.84
CCM2-209ENST00000477605 NDUFA10O95299 355 aa20.31■□□□□ 0.84
CCM2-209ENST00000477605 DNM2P50570 870 aa20.31■□□□□ 0.84
CCM2-209ENST00000477605 CERS3Q8IU89 383 aa20.31■□□□□ 0.84
CCM2-209ENST00000477605 WDR66Q8TBY9 1149 aa20.31■□□□□ 0.84
CCM2-209ENST00000477605 NUP58Q9BVL2 599 aa20.31■□□□□ 0.84
CCM2-209ENST00000477605 BARHL2Q9NY43 387 aa20.31■□□□□ 0.84
CCM2-209ENST00000477605 MAGEC2Q9UBF1 373 aaPredicted RBP20.31■□□□□ 0.84
CCM2-209ENST00000477605 PUF60Q9UHX1 559 aaKnown RBP20.31■□□□□ 0.84
CCM2-209ENST00000477605 MAD2L2Q9UI95 211 aa20.31■□□□□ 0.84
CCM2-209ENST00000477605 A0A0U1RQJ8 604 aa20.31■□□□□ 0.84
CCM2-209ENST00000477605 KLRC4O43908 158 aa20.31■□□□□ 0.84
CCM2-209ENST00000477605 EVX2Q03828 476 aa20.31■□□□□ 0.84
CCM2-209ENST00000477605 BEND6Q5SZJ8 279 aaPredicted RBP20.31■□□□□ 0.84
CCM2-209ENST00000477605 RC3H1Q5TC82 1133 aaKnown RBP20.31■□□□□ 0.84
CCM2-209ENST00000477605 TBC1D9BQ66K14 1250 aa20.31■□□□□ 0.84
CCM2-209ENST00000477605 ATRIPQ8WXE1 791 aa20.31■□□□□ 0.84
CCM2-209ENST00000477605 PSD3Q9NYI0 1048 aa20.31■□□□□ 0.84
CCM2-209ENST00000477605 TFCP2L1Q9NZI6 479 aa20.31■□□□□ 0.84
CCM2-209ENST00000477605 NARFQ9UHQ1 456 aa20.31■□□□□ 0.84
CCM2-209ENST00000477605 RNF225M0QZC1 329 aaPredicted RBP20.3■□□□□ 0.84
CCM2-209ENST00000477605 POLR3GO15318 223 aaPredicted RBP20.3■□□□□ 0.84
CCM2-209ENST00000477605 PPP4CP60510 307 aa20.3■□□□□ 0.84
CCM2-209ENST00000477605 AMPD2Q01433 879 aa20.3■□□□□ 0.84
CCM2-209ENST00000477605 R3HDM1Q15032 1099 aaKnown RBP20.3■□□□□ 0.84
CCM2-209ENST00000477605 IQCDQ96DY2 449 aa20.3■□□□□ 0.84
CCM2-209ENST00000477605 SETDB2Q96T68 719 aa20.3■□□□□ 0.84
CCM2-209ENST00000477605 MYO6Q9UM54 1294 aa20.3■□□□□ 0.84
CCM2-209ENST00000477605 IRS2Q9Y4H2 1338 aa20.3■□□□□ 0.84
CCM2-209ENST00000477605 PSMD14O00487 310 aa20.3■□□□□ 0.84
CCM2-209ENST00000477605 ADAMTS3O15072 1205 aa20.3■□□□□ 0.84
CCM2-209ENST00000477605 EIF3JO75822 258 aaKnown RBP20.3■□□□□ 0.84
CCM2-209ENST00000477605 USP17L8P0C7I0 530 aa20.3■□□□□ 0.84
CCM2-209ENST00000477605 KRT83P78385 493 aa20.3■□□□□ 0.84
CCM2-209ENST00000477605 ORC2Q13416 577 aaPredicted RBP20.3■□□□□ 0.84
CCM2-209ENST00000477605 PROM2Q8N271 834 aa20.3■□□□□ 0.84
CCM2-209ENST00000477605 EHBP1Q8NDI1 1231 aa20.3■□□□□ 0.84
CCM2-209ENST00000477605 SLF1Q9BQI6 1058 aa20.3■□□□□ 0.84
CCM2-209ENST00000477605 ZNF287Q9HBT7 754 aa20.3■□□□□ 0.84
CCM2-209ENST00000477605 TTC26A0AVF1 554 aa20.29■□□□□ 0.84
CCM2-209ENST00000477605 BICDL2A1A5D9 508 aa20.29■□□□□ 0.84
CCM2-209ENST00000477605 PALM3A6NDB9 673 aaPredicted RBP20.29■□□□□ 0.84
CCM2-209ENST00000477605 BAG3O95817 575 aa20.29■□□□□ 0.84
CCM2-209ENST00000477605 CDC25AP30304 524 aa20.29■□□□□ 0.84
CCM2-209ENST00000477605 TPTE2Q6XPS3 522 aa20.29■□□□□ 0.84
CCM2-209ENST00000477605 FAM114A1Q8IWE2 563 aa20.29■□□□□ 0.84
CCM2-209ENST00000477605 RASSF8Q8NHQ8 419 aa20.29■□□□□ 0.84
CCM2-209ENST00000477605 GPKOWQ92917 476 aaPredicted RBP eCLIP20.29■□□□□ 0.84
CCM2-209ENST00000477605 MKNK2Q9HBH9 465 aa20.29■□□□□ 0.84
CCM2-209ENST00000477605 STXBP3O00186 592 aa20.28■□□□□ 0.84
CCM2-209ENST00000477605 COBLO75128 1261 aa20.28■□□□□ 0.84
CCM2-209ENST00000477605 SRGNP10124 158 aa20.28■□□□□ 0.84
CCM2-209ENST00000477605 MEA1Q16626 185 aa20.28■□□□□ 0.84
CCM2-209ENST00000477605 COBLL1Q53SF7 1204 aa20.28■□□□□ 0.84
CCM2-209ENST00000477605 TTI2Q6NXR4 508 aa20.28■□□□□ 0.84
CCM2-209ENST00000477605 KRT25Q7Z3Z0 450 aa20.28■□□□□ 0.84
CCM2-209ENST00000477605 ZNF444Q8N0Y2 327 aaPredicted RBP20.28■□□□□ 0.84
CCM2-209ENST00000477605 STAG2Q8N3U4 1231 aa20.28■□□□□ 0.84
CCM2-209ENST00000477605 ZSWIM4Q9H7M6 989 aa20.28■□□□□ 0.84
CCM2-209ENST00000477605 L1RE1Q9UN81 338 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms