RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 NYXQ9GZU5 481 aa14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 TSPYL2Q9H2G4 693 aaPredicted RBP14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 PICK1Q9NRD5 415 aa14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 NARFQ9UHQ1 456 aa14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 TMEM98Q9Y2Y6 226 aa14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 DDX60Q8IY21 1712 aaKnown RBP14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 SMIM24O75264 130 aa14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 EIF4BP23588 611 aaKnown RBP14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 PRPF4BQ13523 1007 aaKnown RBP14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 RIPK1Q13546 671 aa14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 ADCK5Q3MIX3 580 aa14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 RBM26Q5T8P6 1007 aaKnown RBP14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 TEX9Q8N6V9 391 aa14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 CCDC12Q8WUD4 166 aaPredicted RBP14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 PHF24Q9UPV7 400 aa14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 RTCBQ9Y3I0 505 aaKnown RBP14.09□□□□□ -0.15
RTFDC1-207ENST00000477573 F8VZ95 297 aa14.08□□□□□ -0.16
RTFDC1-207ENST00000477573 M0R2C6 588 aa14.08□□□□□ -0.16
RTFDC1-207ENST00000477573 SMAPO00193 183 aa14.08□□□□□ -0.16
RTFDC1-207ENST00000477573 ATP4AP20648 1035 aa14.08□□□□□ -0.16
RTFDC1-207ENST00000477573 AKNAD1Q5T1N1 836 aa14.08□□□□□ -0.16
RTFDC1-207ENST00000477573 SEPT12Q8IYM1 358 aa14.08□□□□□ -0.16
RTFDC1-207ENST00000477573 TBC1D31Q96DN5 1066 aa14.08□□□□□ -0.16
RTFDC1-207ENST00000477573 SEC62Q99442 399 aaKnown RBP14.08□□□□□ -0.16
RTFDC1-207ENST00000477573 ALDH8A1Q9H2A2 487 aaPredicted RBP14.08□□□□□ -0.16
RTFDC1-207ENST00000477573 ZWILCHQ9H900 591 aa14.08□□□□□ -0.16
RTFDC1-207ENST00000477573 ZFATQ9P243 1243 aa14.08□□□□□ -0.16
RTFDC1-207ENST00000477573 ANKIB1Q9P2G1 1089 aa14.08□□□□□ -0.16
RTFDC1-207ENST00000477573 MYO1AQ9UBC5 1043 aa14.08□□□□□ -0.16
RTFDC1-207ENST00000477573 GNPATO15228 680 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 DESP17661 470 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 CYP11B2P19099 503 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 SESN3P58005 492 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 SLC4A8Q2Y0W8 1093 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 ACCSLQ4AC99 568 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 Q4G0T1 1027 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 RNF187Q5TA31 235 aaPredicted RBP14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 NUGGCQ68CJ6 796 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 C6orf89Q6UWU4 347 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 CCDC129Q6ZRS4 1044 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 PTF1AQ7RTS3 328 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 CCAR1Q8IX12 1150 aaKnown RBP14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 RNF168Q8IYW5 571 aaPredicted RBP14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 LZICQ8WZA0 190 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 CNKSR1Q969H4 720 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 MOV10L1Q9BXT6 1211 aaKnown RBP14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 SCN7AQ01118 1682 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 IPO5O00410 1097 aaKnown RBP14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 PDCP20941 246 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 GJB2P29033 226 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 ZAP70P43403 619 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 KCNQ4P56696 695 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 WHAMMP3Q1A5X7 153 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 ZNF280DQ6N043 979 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 CCDC121Q6ZUS5 278 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 ARMC9Q7Z3E5 817 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 SMYD1Q8NB12 490 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 PHC3Q8NDX5 983 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 KCNV2Q8TDN2 545 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 SETDB2Q96T68 719 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 NUP58Q9BVL2 599 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 EPN3Q9H201 632 aa14.07□□□□□ -0.16
RTFDC1-207ENST00000477573 CTAGE15A4D2H0 777 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 NPTXRO95502 500 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 PENKP01210 267 aaPredicted RBP14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 CTAGE8P0CG41 777 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 FGFR2P21802 821 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 RPS6KB1P23443 525 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 GGCXP38435 758 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 SCNN1BP51168 640 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 MYO1EQ12965 1108 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 KBTBD12Q3ZCT8 623 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 NAA35Q5VZE5 725 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 CTAGE6Q86UF2 777 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 CTAGE4Q8IX94 777 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 AOPEPQ8N6M6 819 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 JAKMIP2Q96AA8 810 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 SEC31BQ9NQW1 1179 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 SBF2Q86WG5 1849 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 LRRC10BA6NIK2 292 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 RASSF10A6NK89 507 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 ATP6V1G2O95670 118 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 EPB41P11171 864 aaKnown RBP14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 CPA1P15085 419 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 SF3B3Q15393 1217 aaKnown RBP14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 WASHC4Q2M389 1173 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 GNPTABQ3T906 1256 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 FAM182BQ5T319 152 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 CCDC102BQ68D86 513 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 POLR3CQ9BUI4 534 aaPredicted RBP14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 NOD2Q9HC29 1040 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 SENP2Q9HC62 589 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 NOP53Q9NZM5 478 aaKnown RBP14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 IFNKQ9P0W0 207 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 LY75O60449 1722 aa14.06□□□□□ -0.16
RTFDC1-207ENST00000477573 MAST3O60307 1309 aa14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 DNAJC8O75937 253 aaPredicted RBP14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 VIL1P09327 827 aaKnown RBP14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 HMGB2P26583 209 aaKnown RBP14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 MCAMP43121 646 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms