RNA–Protein interactions for RNA: ENST00000477529.1

SRRT-210, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-210ENST00000477529 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.52■□□□□ 0.24
SRRT-210ENST00000477529 KAT14Q9H8E8 782 aa16.52■□□□□ 0.24
SRRT-210ENST00000477529 RPTORQ8N122 1335 aa16.51■□□□□ 0.23
SRRT-210ENST00000477529 COL9A3Q14050 684 aaPredicted RBP16.51■□□□□ 0.23
SRRT-210ENST00000477529 IFIT1BQ5T764 474 aaKnown RBP16.51■□□□□ 0.23
SRRT-210ENST00000477529 SYDE2Q5VT97 1194 aa16.51■□□□□ 0.23
SRRT-210ENST00000477529 CREB3L3Q68CJ9 461 aa16.51■□□□□ 0.23
SRRT-210ENST00000477529 DPP9Q86TI2 863 aa16.51■□□□□ 0.23
SRRT-210ENST00000477529 RANBP17Q9H2T7 1088 aaKnown RBP16.51■□□□□ 0.23
SRRT-210ENST00000477529 GPCPD1Q9NPB8 672 aa16.51■□□□□ 0.23
SRRT-210ENST00000477529 CTDP1Q9Y5B0 961 aaPredicted RBP16.51■□□□□ 0.23
SRRT-210ENST00000477529 TAL1P17542 331 aaPredicted RBP16.5■□□□□ 0.23
SRRT-210ENST00000477529 GJA8P48165 433 aa16.5■□□□□ 0.23
SRRT-210ENST00000477529 SNAP25P60880 206 aa16.5■□□□□ 0.23
SRRT-210ENST00000477529 CACNB2Q08289 660 aaPredicted RBP16.5■□□□□ 0.23
SRRT-210ENST00000477529 CHST3Q7LGC8 479 aa16.5■□□□□ 0.23
SRRT-210ENST00000477529 AGBL1Q96MI9 1066 aa16.5■□□□□ 0.23
SRRT-210ENST00000477529 SENP2Q9HC62 589 aa16.5■□□□□ 0.23
SRRT-210ENST00000477529 PGK2P07205 417 aa16.49■□□□□ 0.23
SRRT-210ENST00000477529 GOLGA8HP0CJ92 632 aa16.49■□□□□ 0.23
SRRT-210ENST00000477529 SLC4A3P48751 1232 aa16.49■□□□□ 0.23
SRRT-210ENST00000477529 KCTD2Q14681 263 aa16.49■□□□□ 0.23
SRRT-210ENST00000477529 ASPRV1Q53RT3 343 aa16.49■□□□□ 0.23
SRRT-210ENST00000477529 GPATCH4Q5T3I0 446 aaKnown RBP16.49■□□□□ 0.23
SRRT-210ENST00000477529 OLFML2BQ68BL8 750 aa16.49■□□□□ 0.23
SRRT-210ENST00000477529 CCDC174Q6PII3 467 aa16.49■□□□□ 0.23
SRRT-210ENST00000477529 CHST13Q8NET6 341 aa16.49■□□□□ 0.23
SRRT-210ENST00000477529 U2AF1L4Q8WU68 220 aaKnown RBP16.49■□□□□ 0.23
SRRT-210ENST00000477529 MAML3Q96JK9 1138 aa16.49■□□□□ 0.23
SRRT-210ENST00000477529 DEFB118Q96PH6 123 aa16.49■□□□□ 0.23
SRRT-210ENST00000477529 CPVLQ9H3G5 476 aa16.49■□□□□ 0.23
SRRT-210ENST00000477529 HMX1Q9NP08 348 aaPredicted RBP16.49■□□□□ 0.23
SRRT-210ENST00000477529 HOMER2Q9NSB8 354 aa16.49■□□□□ 0.23
SRRT-210ENST00000477529 LOXHD1Q8IVV2 1947 aa16.49■□□□□ 0.23
SRRT-210ENST00000477529 SCN10AQ9Y5Y9 1956 aa16.48■□□□□ 0.23
SRRT-210ENST00000477529 DNAJC25-GNG10A0A024R161 153 aa16.48■□□□□ 0.23
SRRT-210ENST00000477529 ICAM1P05362 532 aa16.48■□□□□ 0.23
SRRT-210ENST00000477529 CCND3P30281 292 aaPredicted RBP16.48■□□□□ 0.23
SRRT-210ENST00000477529 CYP2C19P33261 490 aa16.48■□□□□ 0.23
SRRT-210ENST00000477529 ZNF792Q3KQV3 632 aa16.48■□□□□ 0.23
SRRT-210ENST00000477529 CRISPLD2Q9H0B8 497 aa16.48■□□□□ 0.23
SRRT-210ENST00000477529 ACAD9Q9H845 621 aa16.48■□□□□ 0.23
SRRT-210ENST00000477529 RNF146Q9NTX7 359 aa16.48■□□□□ 0.23
SRRT-210ENST00000477529 TRIOBPQ9H2D6 2365 aa16.48■□□□□ 0.23
SRRT-210ENST00000477529 IFIT3O14879 490 aaKnown RBP16.47■□□□□ 0.23
SRRT-210ENST00000477529 SGPL1O95470 568 aa16.47■□□□□ 0.23
SRRT-210ENST00000477529 PARP1P09874 1014 aaKnown RBP16.47■□□□□ 0.23
SRRT-210ENST00000477529 ALAS1P13196 640 aa16.47■□□□□ 0.23
SRRT-210ENST00000477529 CYBAP13498 195 aa16.47■□□□□ 0.23
SRRT-210ENST00000477529 WTAPQ15007 396 aa16.47■□□□□ 0.23
SRRT-210ENST00000477529 SART3Q15020 963 aaKnown RBP16.47■□□□□ 0.23
SRRT-210ENST00000477529 MFSD14CQ5VZR4 134 aa16.47■□□□□ 0.23
SRRT-210ENST00000477529 SLC5A4Q9NY91 659 aa16.47■□□□□ 0.23
SRRT-210ENST00000477529 FBXO40Q9UH90 709 aa16.47■□□□□ 0.23
SRRT-210ENST00000477529 CCPG1Q9ULG6 757 aa16.47■□□□□ 0.23
SRRT-210ENST00000477529 DIS3Q9Y2L1 958 aaKnown RBP16.47■□□□□ 0.23
SRRT-210ENST00000477529 ERICH2A1L162 156 aa16.46■□□□□ 0.23
SRRT-210ENST00000477529 MCM5P33992 734 aa16.46■□□□□ 0.23
SRRT-210ENST00000477529 TKFCQ3LXA3 575 aa16.46■□□□□ 0.23
SRRT-210ENST00000477529 MUM1L1Q5H9M0 696 aa16.46■□□□□ 0.23
SRRT-210ENST00000477529 RNF20Q5VTR2 975 aa16.46■□□□□ 0.23
SRRT-210ENST00000477529 UBE2Q1Q7Z7E8 422 aa16.46■□□□□ 0.23
SRRT-210ENST00000477529 RASEFQ8IZ41 740 aa16.46■□□□□ 0.23
SRRT-210ENST00000477529 STAG2Q8N3U4 1231 aa16.46■□□□□ 0.23
SRRT-210ENST00000477529 TRPV1Q8NER1 839 aa16.46■□□□□ 0.23
SRRT-210ENST00000477529 IGDCC4Q8TDY8 1250 aa16.46■□□□□ 0.23
SRRT-210ENST00000477529 FGD4Q96M96 766 aa16.46■□□□□ 0.23
SRRT-210ENST00000477529 LY9Q9HBG7 655 aa16.46■□□□□ 0.23
SRRT-210ENST00000477529 A1CFQ9NQ94 594 aaKnown RBP16.46■□□□□ 0.23
SRRT-210ENST00000477529 WDR19Q8NEZ3 1342 aa16.45■□□□□ 0.22
SRRT-210ENST00000477529 PRC1O43663 620 aa16.45■□□□□ 0.22
SRRT-210ENST00000477529 TROAPQ12815 778 aa16.45■□□□□ 0.22
SRRT-210ENST00000477529 GRM4Q14833 912 aa16.45■□□□□ 0.22
SRRT-210ENST00000477529 CDC37Q16543 378 aaPredicted RBP16.45■□□□□ 0.22
SRRT-210ENST00000477529 TMEM67Q5HYA8 995 aa16.45■□□□□ 0.22
SRRT-210ENST00000477529 ANKRD35Q8N283 1001 aa16.45■□□□□ 0.22
SRRT-210ENST00000477529 TRERF1Q96PN7 1200 aa16.45■□□□□ 0.22
SRRT-210ENST00000477529 MTA3Q9BTC8 594 aa16.45■□□□□ 0.22
SRRT-210ENST00000477529 UBA5Q9GZZ9 404 aa16.45■□□□□ 0.22
SRRT-210ENST00000477529 GPHNQ9NQX3 736 aaPredicted RBP16.45■□□□□ 0.22
SRRT-210ENST00000477529 MAD2L2Q9UI95 211 aa16.45■□□□□ 0.22
SRRT-210ENST00000477529 GBF1Q92538 1859 aa16.45■□□□□ 0.22
SRRT-210ENST00000477529 PFASO15067 1338 aa16.45■□□□□ 0.22
SRRT-210ENST00000477529 RANBP2P49792 3224 aaKnown RBP16.44■□□□□ 0.22
SRRT-210ENST00000477529 PALM3A6NDB9 673 aaPredicted RBP16.44■□□□□ 0.22
SRRT-210ENST00000477529 SH2B2O14492 632 aaPredicted RBP16.44■□□□□ 0.22
SRRT-210ENST00000477529 TSGA10IPQ3SY00 556 aa16.44■□□□□ 0.22
SRRT-210ENST00000477529 ADGRF4Q8IZF3 695 aa16.44■□□□□ 0.22
SRRT-210ENST00000477529 FAM133AQ8N9E0 248 aa16.44■□□□□ 0.22
SRRT-210ENST00000477529 DDX11Q96FC9 970 aa16.44■□□□□ 0.22
SRRT-210ENST00000477529 TINF2Q9BSI4 451 aa16.44■□□□□ 0.22
SRRT-210ENST00000477529 TANC1Q9C0D5 1861 aa16.44■□□□□ 0.22
SRRT-210ENST00000477529 ASTN1O14525 1302 aa16.44■□□□□ 0.22
SRRT-210ENST00000477529 NFIBO00712 420 aa16.43■□□□□ 0.22
SRRT-210ENST00000477529 FARP2O94887 1054 aaPredicted RBP16.43■□□□□ 0.22
SRRT-210ENST00000477529 HSPA4P34932 840 aa16.43■□□□□ 0.22
SRRT-210ENST00000477529 ADCK5Q3MIX3 580 aa16.43■□□□□ 0.22
SRRT-210ENST00000477529 LHX8Q68G74 356 aa16.43■□□□□ 0.22
SRRT-210ENST00000477529 MAMDC4Q6UXC1 1216 aa16.43■□□□□ 0.22
SRRT-210ENST00000477529 ZNF467Q7Z7K2 595 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms