RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 SYNE3Q6ZMZ3 975 aa18.49■□□□□ 0.55
COPS3-207ENST00000477299 CTCFLQ8NI51 663 aaPredicted RBP18.49■□□□□ 0.55
COPS3-207ENST00000477299 TRIM47Q96LD4 638 aa18.49■□□□□ 0.55
COPS3-207ENST00000477299 MAP3K14Q99558 947 aa18.49■□□□□ 0.55
COPS3-207ENST00000477299 SPATC1LQ9H0A9 340 aa18.49■□□□□ 0.55
COPS3-207ENST00000477299 RANBP17Q9H2T7 1088 aaKnown RBP18.49■□□□□ 0.55
COPS3-207ENST00000477299 STAT3P40763 770 aa18.48■□□□□ 0.55
COPS3-207ENST00000477299 FUT2Q10981 343 aa18.48■□□□□ 0.55
COPS3-207ENST00000477299 PIGSQ96S52 555 aa18.48■□□□□ 0.55
COPS3-207ENST00000477299 RIOX1Q9H6W3 641 aa18.48■□□□□ 0.55
COPS3-207ENST00000477299 DHX16O60231 1041 aaKnown RBP18.47■□□□□ 0.55
COPS3-207ENST00000477299 PPP1R11O60927 126 aaPredicted RBP18.47■□□□□ 0.55
COPS3-207ENST00000477299 CALM1P0DP23 149 aa18.47■□□□□ 0.55
COPS3-207ENST00000477299 CALM2P0DP24 149 aa18.47■□□□□ 0.55
COPS3-207ENST00000477299 CALM3P0DP25 149 aa18.47■□□□□ 0.55
COPS3-207ENST00000477299 PSMC4P43686 418 aa18.47■□□□□ 0.55
COPS3-207ENST00000477299 METAP2P50579 478 aaKnown RBP eCLIP18.47■□□□□ 0.55
COPS3-207ENST00000477299 ME3Q16798 604 aa18.47■□□□□ 0.55
COPS3-207ENST00000477299 RTN1Q16799 776 aa18.47■□□□□ 0.55
COPS3-207ENST00000477299 QRICH1Q2TAL8 776 aa18.47■□□□□ 0.55
COPS3-207ENST00000477299 NOM1Q5C9Z4 860 aaKnown RBP18.47■□□□□ 0.55
COPS3-207ENST00000477299 SNRNP48Q6IEG0 339 aaKnown RBP18.47■□□□□ 0.55
COPS3-207ENST00000477299 TMTC3Q6ZXV5 915 aa18.47■□□□□ 0.55
COPS3-207ENST00000477299 MB21D1Q8N884 522 aa18.47■□□□□ 0.55
COPS3-207ENST00000477299 NECAB1Q8N987 351 aa18.47■□□□□ 0.55
COPS3-207ENST00000477299 ERCC3P19447 782 aa18.46■□□□□ 0.55
COPS3-207ENST00000477299 RABEP1Q15276 862 aa18.46■□□□□ 0.55
COPS3-207ENST00000477299 CDC37Q16543 378 aaPredicted RBP18.46■□□□□ 0.55
COPS3-207ENST00000477299 NCAPG2Q86XI2 1143 aa18.46■□□□□ 0.55
COPS3-207ENST00000477299 HOMER1Q86YM7 354 aa18.46■□□□□ 0.55
COPS3-207ENST00000477299 RIOX2Q8IUF8 465 aa18.46■□□□□ 0.55
COPS3-207ENST00000477299 GTF3C2Q8WUA4 911 aaPredicted RBP18.46■□□□□ 0.55
COPS3-207ENST00000477299 MTMR8Q96EF0 704 aa18.46■□□□□ 0.55
COPS3-207ENST00000477299 ZNF274Q96GC6 653 aaPredicted RBP18.46■□□□□ 0.55
COPS3-207ENST00000477299 HOMER2Q9NSB8 354 aa18.46■□□□□ 0.55
COPS3-207ENST00000477299 GABRQQ9UN88 632 aa18.46■□□□□ 0.55
COPS3-207ENST00000477299 LCTP09848 1927 aa18.45■□□□□ 0.54
COPS3-207ENST00000477299 KIF5BP33176 963 aa18.45■□□□□ 0.54
COPS3-207ENST00000477299 ST3GAL1Q11201 340 aa18.45■□□□□ 0.54
COPS3-207ENST00000477299 NTRK3Q16288 839 aa18.45■□□□□ 0.54
COPS3-207ENST00000477299 MUM1L1Q5H9M0 696 aa18.45■□□□□ 0.54
COPS3-207ENST00000477299 WDR78Q5VTH9 848 aa18.45■□□□□ 0.54
COPS3-207ENST00000477299 CTDP1Q9Y5B0 961 aaPredicted RBP18.45■□□□□ 0.54
COPS3-207ENST00000477299 PLXNA1Q9UIW2 1896 aa18.45■□□□□ 0.54
COPS3-207ENST00000477299 CNTNAP5Q8WYK1 1306 aa18.45■□□□□ 0.54
COPS3-207ENST00000477299 ATP2A1O14983 1001 aa18.44■□□□□ 0.54
COPS3-207ENST00000477299 FMNL1O95466 1100 aaPredicted RBP18.44■□□□□ 0.54
COPS3-207ENST00000477299 ALAS1P13196 640 aa18.44■□□□□ 0.54
COPS3-207ENST00000477299 SCRN1Q12765 414 aa18.44■□□□□ 0.54
COPS3-207ENST00000477299 USH1GQ495M9 461 aa18.44■□□□□ 0.54
COPS3-207ENST00000477299 COL13A1Q5TAT6 717 aaPredicted RBP18.44■□□□□ 0.54
COPS3-207ENST00000477299 GPR142Q7Z601 462 aa18.44■□□□□ 0.54
COPS3-207ENST00000477299 PHKBQ93100 1093 aa18.44■□□□□ 0.54
COPS3-207ENST00000477299 SPZ1Q9BXG8 430 aa18.44■□□□□ 0.54
COPS3-207ENST00000477299 TEX13BQ9BXU2 312 aa18.44■□□□□ 0.54
COPS3-207ENST00000477299 CCPG1Q9ULG6 757 aa18.44■□□□□ 0.54
COPS3-207ENST00000477299 NID2Q14112 1375 aa18.43■□□□□ 0.54
COPS3-207ENST00000477299 PFKFB2O60825 505 aa18.43■□□□□ 0.54
COPS3-207ENST00000477299 ICAM1P05362 532 aa18.43■□□□□ 0.54
COPS3-207ENST00000477299 OTOP1Q7RTM1 612 aa18.43■□□□□ 0.54
COPS3-207ENST00000477299 TBC1D5Q92609 795 aa18.43■□□□□ 0.54
COPS3-207ENST00000477299 COA7Q96BR5 231 aa18.43■□□□□ 0.54
COPS3-207ENST00000477299 ERO1AQ96HE7 468 aa18.43■□□□□ 0.54
COPS3-207ENST00000477299 GJD2Q9UKL4 321 aa18.43■□□□□ 0.54
COPS3-207ENST00000477299 V9GY48 417 aaPredicted RBP18.43■□□□□ 0.54
COPS3-207ENST00000477299 TNPO2O14787 897 aaKnown RBP18.42■□□□□ 0.54
COPS3-207ENST00000477299 ZBTB5O15062 677 aa18.42■□□□□ 0.54
COPS3-207ENST00000477299 CTDNEP1O95476 244 aa18.42■□□□□ 0.54
COPS3-207ENST00000477299 FDX1P10109 184 aa18.42■□□□□ 0.54
COPS3-207ENST00000477299 RCAN1P53805 252 aa18.42■□□□□ 0.54
COPS3-207ENST00000477299 ANKRD1Q15327 319 aa18.42■□□□□ 0.54
COPS3-207ENST00000477299 TRERF1Q96PN7 1200 aa18.42■□□□□ 0.54
COPS3-207ENST00000477299 LZTS2Q9BRK4 669 aa18.42■□□□□ 0.54
COPS3-207ENST00000477299 RBM28Q9NW13 759 aaKnown RBP18.42■□□□□ 0.54
COPS3-207ENST00000477299 TRIM17Q9Y577 477 aa18.42■□□□□ 0.54
COPS3-207ENST00000477299 MCM3APO60318 1980 aa18.41■□□□□ 0.54
COPS3-207ENST00000477299 NFIBO00712 420 aa18.41■□□□□ 0.54
COPS3-207ENST00000477299 SMARCA1P28370 1054 aa18.41■□□□□ 0.54
COPS3-207ENST00000477299 GNAQP50148 359 aa18.41■□□□□ 0.54
COPS3-207ENST00000477299 OAZ1P54368 228 aa18.41■□□□□ 0.54
COPS3-207ENST00000477299 FCGRTP55899 365 aa18.41■□□□□ 0.54
COPS3-207ENST00000477299 CCNA1P78396 465 aa18.41■□□□□ 0.54
COPS3-207ENST00000477299 PLEKHH3Q7Z736 793 aa18.41■□□□□ 0.54
COPS3-207ENST00000477299 SHCBP1Q8NEM2 672 aa18.41■□□□□ 0.54
COPS3-207ENST00000477299 CLEC4DQ8WXI8 215 aa18.41■□□□□ 0.54
COPS3-207ENST00000477299 PURBQ96QR8 312 aaKnown RBP18.41■□□□□ 0.54
COPS3-207ENST00000477299 SLKQ9H2G2 1235 aaPredicted RBP18.41■□□□□ 0.54
COPS3-207ENST00000477299 RNF146Q9NTX7 359 aa18.41■□□□□ 0.54
COPS3-207ENST00000477299 LIMCH1Q9UPQ0 1083 aa18.41■□□□□ 0.54
COPS3-207ENST00000477299 PNMA6FA0A0J9YX94 578 aa18.4■□□□□ 0.54
COPS3-207ENST00000477299 PGK2P07205 417 aa18.4■□□□□ 0.54
COPS3-207ENST00000477299 PTPREP23469 700 aa18.4■□□□□ 0.54
COPS3-207ENST00000477299 MAPK4P31152 587 aa18.4■□□□□ 0.54
COPS3-207ENST00000477299 PRKCZQ05513 592 aa18.4■□□□□ 0.54
COPS3-207ENST00000477299 KIF22Q14807 665 aa18.4■□□□□ 0.54
COPS3-207ENST00000477299 MORN1Q5T089 497 aa18.4■□□□□ 0.54
COPS3-207ENST00000477299 FBXO11Q86XK2 927 aa18.4■□□□□ 0.54
COPS3-207ENST00000477299 CCAR1Q8IX12 1150 aaKnown RBP18.4■□□□□ 0.54
COPS3-207ENST00000477299 GPKOWQ92917 476 aaPredicted RBP eCLIP18.4■□□□□ 0.54
COPS3-207ENST00000477299 MROH8Q9H579 483 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms