RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 AKAP11Q9UKA4 1901 aa17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 NDUFAB1O14561 156 aa17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 PROM2Q8N271 834 aa17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 FERMT2Q96AC1 680 aa17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 PAGE5Q96GU1 130 aa17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 PUS3Q9BZE2 481 aaKnown RBP17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 TSGA10Q9BZW7 698 aa17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 CSRNP2Q9H175 543 aa17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 SEC31BQ9NQW1 1179 aa17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 SUFUQ9UMX1 484 aa17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 BTBD18B2RXH4 712 aa17.05■□□□□ 0.32
CLSTN1-205ENST00000477264 HSF2BPO75031 334 aa17.05■□□□□ 0.32
CLSTN1-205ENST00000477264 CCT6AP40227 531 aaKnown RBP17.05■□□□□ 0.32
CLSTN1-205ENST00000477264 RCAN1P53805 252 aa17.05■□□□□ 0.32
CLSTN1-205ENST00000477264 FKBP4Q02790 459 aaKnown RBP eCLIP17.05■□□□□ 0.32
CLSTN1-205ENST00000477264 TTF1Q15361 905 aaPredicted RBP17.05■□□□□ 0.32
CLSTN1-205ENST00000477264 NBPF5PQ86XG9 351 aaPredicted RBP17.05■□□□□ 0.32
CLSTN1-205ENST00000477264 CAVIN3Q969G5 261 aa17.05■□□□□ 0.32
CLSTN1-205ENST00000477264 LY9Q9HBG7 655 aa17.05■□□□□ 0.32
CLSTN1-205ENST00000477264 CNNM1Q9NRU3 951 aa17.05■□□□□ 0.32
CLSTN1-205ENST00000477264 FAM217BQ9NTX9 383 aaPredicted RBP17.05■□□□□ 0.32
CLSTN1-205ENST00000477264 IPO7O95373 1038 aaKnown RBP17.05■□□□□ 0.32
CLSTN1-205ENST00000477264 ERFEQ4G0M1 354 aa17.05■□□□□ 0.32
CLSTN1-205ENST00000477264 TCP11X2Q5H9J9 407 aa17.05■□□□□ 0.32
CLSTN1-205ENST00000477264 TPTE2Q6XPS3 522 aa17.05■□□□□ 0.32
CLSTN1-205ENST00000477264 KIAA1328Q86T90 577 aa17.05■□□□□ 0.32
CLSTN1-205ENST00000477264 TBC1D10CQ8IV04 446 aa17.05■□□□□ 0.32
CLSTN1-205ENST00000477264 IGDCC4Q8TDY8 1250 aa17.05■□□□□ 0.32
CLSTN1-205ENST00000477264 DEXIO95424 95 aa17.04■□□□□ 0.32
CLSTN1-205ENST00000477264 HERVK_113P62684 666 aa17.04■□□□□ 0.32
CLSTN1-205ENST00000477264 PAK1Q13153 545 aa17.04■□□□□ 0.32
CLSTN1-205ENST00000477264 SND1Q7KZF4 910 aaKnown RBP eCLIP17.04■□□□□ 0.322e-7■■■□□ 15.6
CLSTN1-205ENST00000477264 PURBQ96QR8 312 aaKnown RBP17.04■□□□□ 0.32
CLSTN1-205ENST00000477264 PCDHB6Q9Y5E3 794 aa17.04■□□□□ 0.32
CLSTN1-205ENST00000477264 COL24A1Q17RW2 1714 aa17.04■□□□□ 0.32
CLSTN1-205ENST00000477264 KCNJ18B7U540 433 aa17.04■□□□□ 0.32
CLSTN1-205ENST00000477264 MYBL2P10244 700 aa17.04■□□□□ 0.32
CLSTN1-205ENST00000477264 KCNJ12Q14500 433 aa17.04■□□□□ 0.32
CLSTN1-205ENST00000477264 MEA1Q16626 185 aa17.04■□□□□ 0.32
CLSTN1-205ENST00000477264 TMEM67Q5HYA8 995 aa17.04■□□□□ 0.32
CLSTN1-205ENST00000477264 EMC10Q5UCC4 262 aa17.04■□□□□ 0.32
CLSTN1-205ENST00000477264 CCDC170Q8IYT3 715 aa17.04■□□□□ 0.32
CLSTN1-205ENST00000477264 PUS7LQ9H0K6 701 aaKnown RBP17.04■□□□□ 0.32
CLSTN1-205ENST00000477264 HDAC6Q9UBN7 1215 aa17.04■□□□□ 0.32
CLSTN1-205ENST00000477264 LUC7L2Q9Y383 392 aaKnown RBP17.04■□□□□ 0.32
CLSTN1-205ENST00000477264 SLC12A7Q9Y666 1083 aa17.04■□□□□ 0.32
CLSTN1-205ENST00000477264 ENC1O14682 589 aa17.03■□□□□ 0.32
CLSTN1-205ENST00000477264 PRLRP16471 622 aa17.03■□□□□ 0.32
CLSTN1-205ENST00000477264 PREPLQ4J6C6 727 aaPredicted RBP17.03■□□□□ 0.32
CLSTN1-205ENST00000477264 KDM7AQ6ZMT4 941 aa17.03■□□□□ 0.32
CLSTN1-205ENST00000477264 C1orf131Q8NDD1 294 aaKnown RBP17.03■□□□□ 0.32
CLSTN1-205ENST00000477264 MTA3Q9BTC8 594 aa17.03■□□□□ 0.32
CLSTN1-205ENST00000477264 RMND1Q9NWS8 449 aa17.03■□□□□ 0.32
CLSTN1-205ENST00000477264 TFCP2L1Q9NZI6 479 aa17.03■□□□□ 0.32
CLSTN1-205ENST00000477264 CAPN11Q9UMQ6 739 aa17.03■□□□□ 0.32
CLSTN1-205ENST00000477264 TNS1Q9HBL0 1735 aaKnown RBP17.03■□□□□ 0.32
CLSTN1-205ENST00000477264 TRIM75PA6NK02 468 aa17.02■□□□□ 0.32
CLSTN1-205ENST00000477264 RXRAP19793 462 aa17.02■□□□□ 0.32
CLSTN1-205ENST00000477264 METTL24Q5JXM2 366 aa17.02■□□□□ 0.32
CLSTN1-205ENST00000477264 CAPZA3Q96KX2 299 aa17.02■□□□□ 0.32
CLSTN1-205ENST00000477264 TRIM10Q9UDY6 481 aa17.02■□□□□ 0.32
CLSTN1-205ENST00000477264 AFMP43652 599 aa17.02■□□□□ 0.31
CLSTN1-205ENST00000477264 SMTNP53814 917 aa17.02■□□□□ 0.31
CLSTN1-205ENST00000477264 CCDC50Q8IVM0 306 aa17.02■□□□□ 0.31
CLSTN1-205ENST00000477264 GSPT2Q8IYD1 628 aaKnown RBP17.02■□□□□ 0.31
CLSTN1-205ENST00000477264 CHP1Q99653 195 aa17.02■□□□□ 0.31
CLSTN1-205ENST00000477264 VPS16Q9H269 839 aa17.02■□□□□ 0.31
CLSTN1-205ENST00000477264 VCPKMTQ9H867 229 aa17.02■□□□□ 0.31
CLSTN1-205ENST00000477264 CNNM2Q9H8M5 875 aa17.02■□□□□ 0.31
CLSTN1-205ENST00000477264 TAB2Q9NYJ8 693 aa17.02■□□□□ 0.31
CLSTN1-205ENST00000477264 MCM8Q9UJA3 840 aa17.02■□□□□ 0.31
CLSTN1-205ENST00000477264 RTL9Q8NET4 1388 aa17.01■□□□□ 0.31
CLSTN1-205ENST00000477264 LGALS16A8MUM7 142 aa17.01■□□□□ 0.31
CLSTN1-205ENST00000477264 ALX1Q15699 326 aa17.01■□□□□ 0.31
CLSTN1-205ENST00000477264 RETREG2Q8NC44 543 aa17.01■□□□□ 0.31
CLSTN1-205ENST00000477264 EPN3Q9H201 632 aa17.01■□□□□ 0.31
CLSTN1-205ENST00000477264 ACTR5Q9H9F9 607 aaPredicted RBP17.01■□□□□ 0.31
CLSTN1-205ENST00000477264 RIPOR2Q9Y4F9 1068 aa17.01■□□□□ 0.31
CLSTN1-205ENST00000477264 B4E1Z4 1266 aa17.01■□□□□ 0.31
CLSTN1-205ENST00000477264 H7C1D1 291 aa17.01■□□□□ 0.31
CLSTN1-205ENST00000477264 IDEP14735 1019 aa17.01■□□□□ 0.31
CLSTN1-205ENST00000477264 ADD2P35612 726 aa17.01■□□□□ 0.31
CLSTN1-205ENST00000477264 IGHMBP2P38935 993 aaKnown RBP17.01■□□□□ 0.31
CLSTN1-205ENST00000477264 NAP1L1P55209 391 aaKnown RBP17.01■□□□□ 0.31
CLSTN1-205ENST00000477264 UBXN1Q04323 297 aa17.01■□□□□ 0.31
CLSTN1-205ENST00000477264 RTN1Q16799 776 aa17.01■□□□□ 0.31
CLSTN1-205ENST00000477264 SKIDA1Q1XH10 827 aa17.01■□□□□ 0.31
CLSTN1-205ENST00000477264 SLC10A5Q5PT55 438 aa17.01■□□□□ 0.31
CLSTN1-205ENST00000477264 TRIM58Q8NG06 486 aa17.01■□□□□ 0.31
CLSTN1-205ENST00000477264 IQCDQ96DY2 449 aa17.01■□□□□ 0.31
CLSTN1-205ENST00000477264 NUP58Q9BVL2 599 aa17.01■□□□□ 0.31
CLSTN1-205ENST00000477264 ZNHIT6Q9NWK9 470 aaKnown RBP17.01■□□□□ 0.31
CLSTN1-205ENST00000477264 RGPD3A6NKT7 1758 aaPredicted RBP17■□□□□ 0.31
CLSTN1-205ENST00000477264 RGPD4Q7Z3J3 1758 aa17■□□□□ 0.31
CLSTN1-205ENST00000477264 PDS5AQ29RF7 1337 aaKnown RBP17■□□□□ 0.31
CLSTN1-205ENST00000477264 RNF225M0QZC1 329 aaPredicted RBP17■□□□□ 0.31
CLSTN1-205ENST00000477264 GTPBP6O43824 516 aaPredicted RBP17■□□□□ 0.31
CLSTN1-205ENST00000477264 EEF1GP26641 437 aaKnown RBP17■□□□□ 0.31
CLSTN1-205ENST00000477264 ELF1P32519 619 aa17■□□□□ 0.31
CLSTN1-205ENST00000477264 C2orf54Q08AI8 447 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms