RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 CSPP1Q1MSJ5 1256 aa18.64■□□□□ 0.57
SMG5-204ENST00000476954 KATNBL1Q9H079 304 aa18.64■□□□□ 0.57
SMG5-204ENST00000476954 MCM9Q9NXL9 1143 aa18.64■□□□□ 0.57
SMG5-204ENST00000476954 TLR7Q9NYK1 1049 aaKnown RBP18.64■□□□□ 0.57
SMG5-204ENST00000476954 ZDBF2Q9HCK1 2354 aa18.64■□□□□ 0.57
SMG5-204ENST00000476954 FAM83BQ5T0W9 1011 aa18.63■□□□□ 0.57
SMG5-204ENST00000476954 SNRNP48Q6IEG0 339 aaKnown RBP18.63■□□□□ 0.57
SMG5-204ENST00000476954 TET1Q8NFU7 2136 aa18.63■□□□□ 0.57
SMG5-204ENST00000476954 ZNF512BQ96KM6 892 aaPredicted RBP18.63■□□□□ 0.57
SMG5-204ENST00000476954 ABHD16BQ9H3Z7 469 aa18.63■□□□□ 0.57
SMG5-204ENST00000476954 WDFY4Q6ZS81 3184 aa18.63■□□□□ 0.57
SMG5-204ENST00000476954 NKX3-2P78367 333 aa18.62■□□□□ 0.57
SMG5-204ENST00000476954 ARMCX2Q7L311 632 aa18.62■□□□□ 0.57
SMG5-204ENST00000476954 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.62■□□□□ 0.57
SMG5-204ENST00000476954 GDPD5Q8WTR4 605 aa18.62■□□□□ 0.57
SMG5-204ENST00000476954 UBE2ZQ9H832 354 aaPredicted RBP18.62■□□□□ 0.57
SMG5-204ENST00000476954 DBNLQ9UJU6 430 aaKnown RBP18.62■□□□□ 0.57
SMG5-204ENST00000476954 BAZ2AQ9UIF9 1905 aaKnown RBP18.61■□□□□ 0.57
SMG5-204ENST00000476954 RAD21O60216 631 aa18.61■□□□□ 0.57
SMG5-204ENST00000476954 GNAI3P08754 354 aa18.61■□□□□ 0.57
SMG5-204ENST00000476954 CYP2C9P11712 490 aa18.61■□□□□ 0.57
SMG5-204ENST00000476954 EEF2P13639 858 aaKnown RBP18.61■□□□□ 0.57
SMG5-204ENST00000476954 COPB2P35606 906 aa18.61■□□□□ 0.57
SMG5-204ENST00000476954 ZNF467Q7Z7K2 595 aaPredicted RBP18.61■□□□□ 0.57
SMG5-204ENST00000476954 CERS3Q8IU89 383 aa18.61■□□□□ 0.57
SMG5-204ENST00000476954 SDR42E1Q8WUS8 393 aa18.61■□□□□ 0.57
SMG5-204ENST00000476954 NUP88Q99567 741 aaPredicted RBP18.61■□□□□ 0.57
SMG5-204ENST00000476954 API5Q9BZZ5 524 aaKnown RBP18.61■□□□□ 0.57
SMG5-204ENST00000476954 SH2D4AQ9H788 454 aa18.61■□□□□ 0.57
SMG5-204ENST00000476954 GPR108Q9NPR9 543 aa18.61■□□□□ 0.57
SMG5-204ENST00000476954 DDX49Q9Y6V7 483 aaKnown RBP18.61■□□□□ 0.57
SMG5-204ENST00000476954 SPTBN4Q9H254 2564 aa18.61■□□□□ 0.57
SMG5-204ENST00000476954 LCHNA4D1U4 455 aa18.6■□□□□ 0.57
SMG5-204ENST00000476954 IGSF3O75054 1194 aa18.6■□□□□ 0.57
SMG5-204ENST00000476954 ALADP13716 330 aa18.6■□□□□ 0.57
SMG5-204ENST00000476954 TMEM63BQ5T3F8 832 aa18.6■□□□□ 0.57
SMG5-204ENST00000476954 NOL8Q76FK4 1167 aaKnown RBP18.6■□□□□ 0.57
SMG5-204ENST00000476954 HERC6Q8IVU3 1022 aa18.6■□□□□ 0.57
SMG5-204ENST00000476954 CCDC144CPQ8IYA2 1237 aa18.6■□□□□ 0.57
SMG5-204ENST00000476954 FAM9BQ8IZU0 186 aa18.6■□□□□ 0.57
SMG5-204ENST00000476954 TEX13BQ9BXU2 312 aa18.6■□□□□ 0.57
SMG5-204ENST00000476954 CCDC8Q9H0W5 538 aaPredicted RBP18.6■□□□□ 0.57
SMG5-204ENST00000476954 TRMT13Q9NUP7 481 aaKnown RBP18.6■□□□□ 0.57
SMG5-204ENST00000476954 MAGEB6P1A0A0J9YX57 407 aa18.59■□□□□ 0.57
SMG5-204ENST00000476954 RBAK-RBAKDNI3L0D1 243 aa18.59■□□□□ 0.57
SMG5-204ENST00000476954 KCNA5P22460 613 aa18.59■□□□□ 0.57
SMG5-204ENST00000476954 TNFAIP2Q03169 654 aa18.59■□□□□ 0.57
SMG5-204ENST00000476954 TMCO2Q7Z6W1 182 aaPredicted RBP18.59■□□□□ 0.57
SMG5-204ENST00000476954 CPXCR1Q8N123 301 aa18.59■□□□□ 0.57
SMG5-204ENST00000476954 SLC9A7Q96T83 725 aa18.59■□□□□ 0.57
SMG5-204ENST00000476954 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.58■□□□□ 0.56
SMG5-204ENST00000476954 CABYRO75952 493 aa18.58■□□□□ 0.56
SMG5-204ENST00000476954 FSCN1Q16658 493 aaKnown RBP18.58■□□□□ 0.56
SMG5-204ENST00000476954 LEXMQ3ZCV2 418 aa18.58■□□□□ 0.56
SMG5-204ENST00000476954 TLK2Q86UE8 772 aa18.58■□□□□ 0.56
SMG5-204ENST00000476954 ALDH8A1Q9H2A2 487 aaPredicted RBP18.58■□□□□ 0.56
SMG5-204ENST00000476954 DCP1AQ9NPI6 582 aaPredicted RBP18.58■□□□□ 0.56
SMG5-204ENST00000476954 GNEQ9Y223 722 aaKnown RBP18.58■□□□□ 0.56
SMG5-204ENST00000476954 TANC1Q9C0D5 1861 aa18.57■□□□□ 0.56
SMG5-204ENST00000476954 CYP2D7A0A087X1C5 515 aa18.57■□□□□ 0.56
SMG5-204ENST00000476954 E9PSI1 815 aa18.57■□□□□ 0.56
SMG5-204ENST00000476954 DCXO43602 365 aa18.57■□□□□ 0.56
SMG5-204ENST00000476954 CNTN2Q02246 1040 aa18.57■□□□□ 0.56
SMG5-204ENST00000476954 SLFN5Q08AF3 891 aa18.57■□□□□ 0.56
SMG5-204ENST00000476954 HFE2Q6ZVN8 426 aa18.57■□□□□ 0.56
SMG5-204ENST00000476954 PPP1R13LQ8WUF5 828 aa18.57■□□□□ 0.56
SMG5-204ENST00000476954 SLF1Q9BQI6 1058 aa18.57■□□□□ 0.56
SMG5-204ENST00000476954 CRNKL1Q9BZJ0 848 aaKnown RBP18.57■□□□□ 0.56
SMG5-204ENST00000476954 KCNH6Q9H252 994 aa18.57■□□□□ 0.56
SMG5-204ENST00000476954 MTUS1Q9ULD2 1270 aa18.57■□□□□ 0.56
SMG5-204ENST00000476954 POTEB3A0JP26 581 aa18.56■□□□□ 0.56
SMG5-204ENST00000476954 DYNC1LI2O43237 492 aaPredicted RBP18.56■□□□□ 0.56
SMG5-204ENST00000476954 PFKMP08237 780 aa18.56■□□□□ 0.56
SMG5-204ENST00000476954 SMPD1P17405 629 aa18.56■□□□□ 0.56
SMG5-204ENST00000476954 OS9Q13438 667 aaPredicted RBP18.56■□□□□ 0.56
SMG5-204ENST00000476954 PTCRAQ6ISU1 281 aaPredicted RBP18.56■□□□□ 0.56
SMG5-204ENST00000476954 POTEBQ6S5H4 581 aa18.56■□□□□ 0.56
SMG5-204ENST00000476954 ANKRD35Q8N283 1001 aa18.56■□□□□ 0.56
SMG5-204ENST00000476954 LCORLQ8N3X6 602 aa18.56■□□□□ 0.56
SMG5-204ENST00000476954 PHOSPHO2Q8TCD6 241 aa18.56■□□□□ 0.56
SMG5-204ENST00000476954 RAVER2Q9HCJ3 691 aaKnown RBP18.56■□□□□ 0.56
SMG5-204ENST00000476954 SWAP70Q9UH65 585 aa18.56■□□□□ 0.56
SMG5-204ENST00000476954 GNAI2P04899 355 aa18.55■□□□□ 0.56
SMG5-204ENST00000476954 ACTN1P12814 892 aa18.55■□□□□ 0.56
SMG5-204ENST00000476954 PDGFCQ9NRA1 345 aa18.55■□□□□ 0.56
SMG5-204ENST00000476954 TNNQ9UQP3 1299 aa18.55■□□□□ 0.56
SMG5-204ENST00000476954 ZFHX2Q9C0A1 2572 aaPredicted RBP18.55■□□□□ 0.56
SMG5-204ENST00000476954 ZNF536O15090 1300 aa18.54■□□□□ 0.56
SMG5-204ENST00000476954 TNKSO95271 1327 aa18.54■□□□□ 0.56
SMG5-204ENST00000476954 GRXCR2A6NFK2 248 aa18.54■□□□□ 0.56
SMG5-204ENST00000476954 KIF28PB7ZC32 967 aa18.54■□□□□ 0.56
SMG5-204ENST00000476954 PRKAB2O43741 272 aa18.54■□□□□ 0.56
SMG5-204ENST00000476954 CDK8P49336 464 aa18.54■□□□□ 0.56
SMG5-204ENST00000476954 EAF2Q96CJ1 260 aaPredicted RBP18.54■□□□□ 0.56
SMG5-204ENST00000476954 AP5M1Q9H0R1 490 aa18.54■□□□□ 0.56
SMG5-204ENST00000476954 SUGCTQ9HAC7 445 aa18.54■□□□□ 0.56
SMG5-204ENST00000476954 GOPCQ9HD26 462 aa18.54■□□□□ 0.56
SMG5-204ENST00000476954 TRIP12Q14669 1992 aaPredicted RBP18.53■□□□□ 0.56
SMG5-204ENST00000476954 PRSS33Q8NF86 280 aa18.53■□□□□ 0.56
SMG5-204ENST00000476954 FTOQ9C0B1 505 aaKnown RBP eCLIP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms