RNA–Protein interactions for RNA: ENST00000476531.1

PGK1-203, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 2

Gene PGK1, Length 960 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-203ENST00000476531 RNF39Q9H2S5 420 aa12.47□□□□□ -0.41
PGK1-203ENST00000476531 ANO2Q9NQ90 1003 aa12.47□□□□□ -0.41
PGK1-203ENST00000476531 CNPY2Q9Y2B0 182 aa12.47□□□□□ -0.41
PGK1-203ENST00000476531 RIPK3Q9Y572 518 aa12.47□□□□□ -0.41
PGK1-203ENST00000476531 GREB1LQ9C091 1923 aaPredicted RBP12.47□□□□□ -0.41
PGK1-203ENST00000476531 PLXNA1Q9UIW2 1896 aa12.46□□□□□ -0.41
PGK1-203ENST00000476531 SYNGAP1Q96PV0 1343 aa12.46□□□□□ -0.41
PGK1-203ENST00000476531 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.46□□□□□ -0.41
PGK1-203ENST00000476531 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.46□□□□□ -0.41
PGK1-203ENST00000476531 MYADML2A6NDP7 307 aa12.46□□□□□ -0.41
PGK1-203ENST00000476531 MOXD2PA6NHM9 499 aa12.46□□□□□ -0.41
PGK1-203ENST00000476531 HIP1O00291 1037 aa12.46□□□□□ -0.41
PGK1-203ENST00000476531 FOXP2O15409 715 aa12.46□□□□□ -0.41
PGK1-203ENST00000476531 RAD21O60216 631 aa12.46□□□□□ -0.41
PGK1-203ENST00000476531 RASA1P20936 1047 aa12.46□□□□□ -0.41
PGK1-203ENST00000476531 IRX5P78411 483 aaPredicted RBP12.46□□□□□ -0.41
PGK1-203ENST00000476531 KCNA10Q16322 511 aa12.46□□□□□ -0.41
PGK1-203ENST00000476531 VPS53Q5VIR6 699 aa12.46□□□□□ -0.41
PGK1-203ENST00000476531 SNRNP48Q6IEG0 339 aaKnown RBP12.46□□□□□ -0.41
PGK1-203ENST00000476531 MAMDC4Q6UXC1 1216 aa12.46□□□□□ -0.41
PGK1-203ENST00000476531 USP38Q8NB14 1042 aa12.46□□□□□ -0.41
PGK1-203ENST00000476531 TEX13BQ9BXU2 312 aa12.46□□□□□ -0.41
PGK1-203ENST00000476531 USP26Q9BXU7 913 aa12.46□□□□□ -0.41
PGK1-203ENST00000476531 STARD7Q9NQZ5 370 aa12.46□□□□□ -0.41
PGK1-203ENST00000476531 TBX21Q9UL17 535 aa12.46□□□□□ -0.41
PGK1-203ENST00000476531 FAM184BQ9ULE4 1060 aa12.46□□□□□ -0.41
PGK1-203ENST00000476531 RBM19Q9Y4C8 960 aaKnown RBP12.46□□□□□ -0.41
PGK1-203ENST00000476531 TTC28Q96AY4 2481 aa12.46□□□□□ -0.42
PGK1-203ENST00000476531 CCDC171Q6TFL3 1326 aa12.45□□□□□ -0.42
PGK1-203ENST00000476531 RAD50Q92878 1312 aa12.45□□□□□ -0.42
PGK1-203ENST00000476531 DCDC2CA8MYV0 355 aa12.45□□□□□ -0.42
PGK1-203ENST00000476531 ADCY6O43306 1168 aa12.45□□□□□ -0.42
PGK1-203ENST00000476531 TIMP1P01033 207 aa12.45□□□□□ -0.42
PGK1-203ENST00000476531 DNAJB2P25686 324 aa12.45□□□□□ -0.42
PGK1-203ENST00000476531 CST5P28325 142 aaPredicted RBP12.45□□□□□ -0.42
PGK1-203ENST00000476531 CDK7P50613 346 aa12.45□□□□□ -0.42
PGK1-203ENST00000476531 MCMDC2Q4G0Z9 681 aa12.45□□□□□ -0.42
PGK1-203ENST00000476531 SBK1Q52WX2 424 aa12.45□□□□□ -0.42
PGK1-203ENST00000476531 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.45□□□□□ -0.42
PGK1-203ENST00000476531 C16orf59Q7L2K0 433 aa12.45□□□□□ -0.42
PGK1-203ENST00000476531 NUP133Q8WUM0 1156 aa12.45□□□□□ -0.42
PGK1-203ENST00000476531 APPBP2Q92624 585 aa12.45□□□□□ -0.42
PGK1-203ENST00000476531 DDRGK1Q96HY6 314 aa12.45□□□□□ -0.42
PGK1-203ENST00000476531 FGD4Q96M96 766 aa12.45□□□□□ -0.42
PGK1-203ENST00000476531 TBC1D32Q96NH3 1257 aa12.45□□□□□ -0.42
PGK1-203ENST00000476531 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.45□□□□□ -0.424e-39■■■■■ 32.7
PGK1-203ENST00000476531 HELLSQ9NRZ9 838 aa12.45□□□□□ -0.42
PGK1-203ENST00000476531 NYAP2Q9P242 653 aa12.45□□□□□ -0.42
PGK1-203ENST00000476531 ARPP21Q9UBL0 812 aaPredicted RBP12.45□□□□□ -0.42
PGK1-203ENST00000476531 ZHX1Q9UKY1 873 aaPredicted RBP12.45□□□□□ -0.42
PGK1-203ENST00000476531 IGKV6D-41A0A0C4DH26 115 aa12.44□□□□□ -0.42
PGK1-203ENST00000476531 F5H6K3 240 aa12.44□□□□□ -0.42
PGK1-203ENST00000476531 ATP2A1O14983 1001 aa12.44□□□□□ -0.42
PGK1-203ENST00000476531 DUSP11O75319 330 aaKnown RBP12.44□□□□□ -0.42
PGK1-203ENST00000476531 NDUFB10O96000 172 aa12.44□□□□□ -0.42
PGK1-203ENST00000476531 ZFYP08048 801 aaPredicted RBP12.44□□□□□ -0.42
PGK1-203ENST00000476531 KLRC3Q07444 240 aa12.44□□□□□ -0.42
PGK1-203ENST00000476531 RASIP1Q5U651 963 aa12.44□□□□□ -0.42
PGK1-203ENST00000476531 ZNF467Q7Z7K2 595 aaPredicted RBP12.44□□□□□ -0.42
PGK1-203ENST00000476531 RUFY2Q8WXA3 655 aa12.44□□□□□ -0.42
PGK1-203ENST00000476531 STRBPQ96SI9 672 aaKnown RBP12.44□□□□□ -0.42
PGK1-203ENST00000476531 C22orf23Q9BZE7 217 aa12.44□□□□□ -0.42
PGK1-203ENST00000476531 UPF3AQ9H1J1 476 aaKnown RBP12.44□□□□□ -0.42
PGK1-203ENST00000476531 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.44□□□□□ -0.42
PGK1-203ENST00000476531 ELP1O95163 1332 aa12.43□□□□□ -0.42
PGK1-203ENST00000476531 GSG1L2A8MUP6 293 aa12.43□□□□□ -0.42
PGK1-203ENST00000476531 GPAA1O43292 621 aa12.43□□□□□ -0.42
PGK1-203ENST00000476531 ACVR2BQ13705 512 aa12.43□□□□□ -0.42
PGK1-203ENST00000476531 TMEM240Q5SV17 173 aa12.43□□□□□ -0.42
PGK1-203ENST00000476531 MFSD5Q6N075 450 aa12.43□□□□□ -0.42
PGK1-203ENST00000476531 ZSCAN25Q6NSZ9 544 aa12.43□□□□□ -0.42
PGK1-203ENST00000476531 PRPF38AQ8NAV1 312 aaKnown RBP12.43□□□□□ -0.42
PGK1-203ENST00000476531 TIFAQ96CG3 184 aa12.43□□□□□ -0.42
PGK1-203ENST00000476531 DDX11Q96FC9 970 aa12.43□□□□□ -0.42
PGK1-203ENST00000476531 ZNF576Q9H609 170 aa12.43□□□□□ -0.42
PGK1-203ENST00000476531 TAF6LQ9Y6J9 622 aa12.43□□□□□ -0.42
PGK1-203ENST00000476531 GRXCR1A8MXD5 290 aa12.42□□□□□ -0.42
PGK1-203ENST00000476531 TNFRSF10AO00220 468 aa12.42□□□□□ -0.42
PGK1-203ENST00000476531 CTAGE5O15320 804 aa12.42□□□□□ -0.42
PGK1-203ENST00000476531 ZBED4O75132 1171 aa12.42□□□□□ -0.42
PGK1-203ENST00000476531 REC8O95072 547 aa12.42□□□□□ -0.42
PGK1-203ENST00000476531 ASGR1P07306 291 aa12.42□□□□□ -0.42
PGK1-203ENST00000476531 C6orf222P0C671 652 aaPredicted RBP12.42□□□□□ -0.42
PGK1-203ENST00000476531 PBX2P40425 430 aa12.42□□□□□ -0.42
PGK1-203ENST00000476531 GJA9P57773 515 aa12.42□□□□□ -0.42
PGK1-203ENST00000476531 PPIGQ13427 754 aaKnown RBP eCLIP12.42□□□□□ -0.42
PGK1-203ENST00000476531 CCDC144BQ3MJ40 725 aa12.42□□□□□ -0.42
PGK1-203ENST00000476531 CPXCR1Q8N123 301 aa12.42□□□□□ -0.42
PGK1-203ENST00000476531 STK11IPQ8N1F8 1099 aa12.42□□□□□ -0.42
PGK1-203ENST00000476531 GLT1D1Q96MS3 346 aa12.42□□□□□ -0.42
PGK1-203ENST00000476531 KIF2CQ99661 725 aa12.42□□□□□ -0.42
PGK1-203ENST00000476531 KATNBL1Q9H079 304 aa12.42□□□□□ -0.42
PGK1-203ENST00000476531 SLC38A10Q9HBR0 1119 aa12.42□□□□□ -0.42
PGK1-203ENST00000476531 RAVER2Q9HCJ3 691 aaKnown RBP12.42□□□□□ -0.42
PGK1-203ENST00000476531 CLIP2Q9UDT6 1046 aa12.42□□□□□ -0.42
PGK1-203ENST00000476531 RBM8AQ9Y5S9 174 aaKnown RBP12.42□□□□□ -0.42
PGK1-203ENST00000476531 MROH7Q68CQ1 1323 aa12.41□□□□□ -0.42
PGK1-203ENST00000476531 A0A0U1RQG5 324 aaPredicted RBP12.41□□□□□ -0.42
PGK1-203ENST00000476531 ARVCFO00192 962 aa12.41□□□□□ -0.42
PGK1-203ENST00000476531 CSF2RAP15509 400 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms