RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, human

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-223	ENST00000476135	APBB1	O00213	710 aa		8.91	□□□□□ -0.98
HDAC9-223	ENST00000476135	RFXAP	O00287	272 aa		8.91	□□□□□ -0.98
HDAC9-223	ENST00000476135	APAF1	O14727	1248 aa		8.91	□□□□□ -0.98
HDAC9-223	ENST00000476135	COBL	O75128	1261 aa		8.91	□□□□□ -0.98
HDAC9-223	ENST00000476135	CDK7	P50613	346 aa		8.91	□□□□□ -0.98
HDAC9-223	ENST00000476135	MMP16	P51512	607 aa		8.91	□□□□□ -0.98
HDAC9-223	ENST00000476135	ACLY	P53396	1101 aa		8.91	□□□□□ -0.98
HDAC9-223	ENST00000476135	RABGGTB	P53611	331 aa		8.91	□□□□□ -0.98
HDAC9-223	ENST00000476135	JAG1	P78504	1218 aa		8.91	□□□□□ -0.98
HDAC9-223	ENST00000476135	SPTY2D1	Q68D10	685 aa	Predicted RBP	8.91	□□□□□ -0.98
HDAC9-223	ENST00000476135	SHCBP1	Q8NEM2	672 aa		8.91	□□□□□ -0.98
HDAC9-223	ENST00000476135	TSR2	Q969E8	191 aa	Known RBP	8.91	□□□□□ -0.98
HDAC9-223	ENST00000476135	ZNF775	Q96BV0	537 aa	Predicted RBP	8.91	□□□□□ -0.98
HDAC9-223	ENST00000476135	ZDBF2	Q9HCK1	2354 aa		8.91	□□□□□ -0.98
HDAC9-223	ENST00000476135	USP34	Q70CQ2	3546 aa		8.9	□□□□□ -0.98
HDAC9-223	ENST00000476135	ELP1	O95163	1332 aa		8.9	□□□□□ -0.98
HDAC9-223	ENST00000476135	PDS5A	Q29RF7	1337 aa	Known RBP	8.9	□□□□□ -0.98
HDAC9-223	ENST00000476135	ST8SIA5	O15466	376 aa		8.9	□□□□□ -0.98
HDAC9-223	ENST00000476135	ZBTB24	O43167	697 aa	Predicted RBP	8.9	□□□□□ -0.98
HDAC9-223	ENST00000476135	DCX	O43602	365 aa		8.9	□□□□□ -0.98
HDAC9-223	ENST00000476135	ADAMTS4	O75173	837 aa		8.9	□□□□□ -0.98
HDAC9-223	ENST00000476135	MYOG	P15173	224 aa		8.9	□□□□□ -0.98
HDAC9-223	ENST00000476135	USP46	P62068	366 aa		8.9	□□□□□ -0.98
HDAC9-223	ENST00000476135	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	8.9	□□□□□ -0.98
HDAC9-223	ENST00000476135	METTL16	Q86W50	562 aa	Known RBP	8.9	□□□□□ -0.98
HDAC9-223	ENST00000476135	ABRA	Q8N0Z2	381 aa		8.9	□□□□□ -0.98
HDAC9-223	ENST00000476135	MAML3	Q96JK9	1138 aa		8.9	□□□□□ -0.98
HDAC9-223	ENST00000476135	MFSD14A	Q96MC6	490 aa		8.9	□□□□□ -0.98
HDAC9-223	ENST00000476135	USB1	Q9BQ65	265 aa	Known RBP	8.9	□□□□□ -0.98
HDAC9-223	ENST00000476135	PPP1R12C	Q9BZL4	782 aa		8.9	□□□□□ -0.98
HDAC9-223	ENST00000476135	SRCIN1	Q9C0H9	1055 aa		8.9	□□□□□ -0.98
HDAC9-223	ENST00000476135	DHX36	Q9H2U1	1008 aa	Known RBP	8.9	□□□□□ -0.98
HDAC9-223	ENST00000476135	BICC1	Q9H694	974 aa	Known RBP	8.9	□□□□□ -0.98
HDAC9-223	ENST00000476135	GPCPD1	Q9NPB8	672 aa		8.9	□□□□□ -0.98
HDAC9-223	ENST00000476135	AAAS	Q9NRG9	546 aa		8.9	□□□□□ -0.98
HDAC9-223	ENST00000476135	TOR4A	Q9NXH8	423 aa		8.9	□□□□□ -0.98
HDAC9-223	ENST00000476135	ZBTB21	Q9ULJ3	1066 aa		8.9	□□□□□ -0.98
HDAC9-223	ENST00000476135	SLC4A7	Q9Y6M7	1214 aa		8.9	□□□□□ -0.98
HDAC9-223	ENST00000476135	ZNFX1	Q9P2E3	1918 aa	Known RBP	8.9	□□□□□ -0.99
HDAC9-223	ENST00000476135	CFAP54	Q96N23	3096 aa		8.89	□□□□□ -0.99
HDAC9-223	ENST00000476135	EYA2	O00167	538 aa		8.89	□□□□□ -0.99
HDAC9-223	ENST00000476135	TLR3	O15455	904 aa	Known RBP	8.89	□□□□□ -0.99
HDAC9-223	ENST00000476135	HOXA2	O43364	376 aa		8.89	□□□□□ -0.99
HDAC9-223	ENST00000476135	NBPF7	P0C2Y1	421 aa	Predicted RBP	8.89	□□□□□ -0.99
HDAC9-223	ENST00000476135	AKR1A1	P14550	325 aa		8.89	□□□□□ -0.99
HDAC9-223	ENST00000476135	SSTR3	P32745	418 aa	Predicted RBP	8.89	□□□□□ -0.99
HDAC9-223	ENST00000476135	USP14	P54578	494 aa		8.89	□□□□□ -0.99
HDAC9-223	ENST00000476135	TMEM67	Q5HYA8	995 aa		8.89	□□□□□ -0.99
HDAC9-223	ENST00000476135	KRT40	Q6A162	431 aa		8.89	□□□□□ -0.99
HDAC9-223	ENST00000476135	OTOP2	Q7RTS6	562 aa		8.89	□□□□□ -0.99
HDAC9-223	ENST00000476135	FOXP4	Q8IVH2	680 aa	Predicted RBP	8.89	□□□□□ -0.99
HDAC9-223	ENST00000476135	ANKRD44	Q8N8A2	993 aa		8.89	□□□□□ -0.99
HDAC9-223	ENST00000476135	KLHDC9	Q8NEP7	349 aa		8.89	□□□□□ -0.99
HDAC9-223	ENST00000476135	KLHDC4	Q8TBB5	520 aa		8.89	□□□□□ -0.99
HDAC9-223	ENST00000476135	MOV10L1	Q9BXT6	1211 aa	Known RBP	8.89	□□□□□ -0.99
HDAC9-223	ENST00000476135	FAM217B	Q9NTX9	383 aa	Predicted RBP	8.89	□□□□□ -0.99
HDAC9-223	ENST00000476135	ABCF2	Q9UG63	623 aa		8.89	□□□□□ -0.99
HDAC9-223	ENST00000476135	EPOP	A6NHQ4	379 aa		8.88	□□□□□ -0.99
HDAC9-223	ENST00000476135	ARVCF	O00192	962 aa		8.88	□□□□□ -0.99
HDAC9-223	ENST00000476135	GDF11	O95390	407 aa		8.88	□□□□□ -0.99
HDAC9-223	ENST00000476135	LDHC	P07864	332 aa		8.88	□□□□□ -0.99
HDAC9-223	ENST00000476135	ATP2A2	P16615	1042 aa	Known RBP	8.88	□□□□□ -0.99
HDAC9-223	ENST00000476135	CYP2C18	P33260	490 aa		8.88	□□□□□ -0.99
HDAC9-223	ENST00000476135	CLCN1	P35523	988 aa		8.88	□□□□□ -0.99
HDAC9-223	ENST00000476135	PHKA1	P46020	1223 aa		8.88	□□□□□ -0.99
HDAC9-223	ENST00000476135	MECOM	Q03112	1051 aa		8.88	□□□□□ -0.99
HDAC9-223	ENST00000476135	KCNA10	Q16322	511 aa		8.88	□□□□□ -0.99
HDAC9-223	ENST00000476135	ATP2B3	Q16720	1220 aa		8.88	□□□□□ -0.99
HDAC9-223	ENST00000476135	SHROOM1	Q2M3G4	852 aa	Predicted RBP	8.88	□□□□□ -0.99
HDAC9-223	ENST00000476135	LEXM	Q3ZCV2	418 aa		8.88	□□□□□ -0.99
HDAC9-223	ENST00000476135	CCSAP	Q6IQ19	270 aa	Predicted RBP	8.88	□□□□□ -0.99
HDAC9-223	ENST00000476135	ERMP1	Q7Z2K6	904 aa		8.88	□□□□□ -0.99
HDAC9-223	ENST00000476135	FAM126B	Q8IXS8	530 aa		8.88	□□□□□ -0.99
HDAC9-223	ENST00000476135	RPUSD2	Q8IZ73	545 aa	Known RBP	8.88	□□□□□ -0.99
HDAC9-223	ENST00000476135	CYP4X1	Q8N118	509 aa		8.88	□□□□□ -0.99
HDAC9-223	ENST00000476135	GLT1D1	Q96MS3	346 aa		8.88	□□□□□ -0.99
HDAC9-223	ENST00000476135	SPATC1L	Q9H0A9	340 aa		8.88	□□□□□ -0.99
HDAC9-223	ENST00000476135	MROH8	Q9H579	483 aa		8.88	□□□□□ -0.99
HDAC9-223	ENST00000476135	DNAJC18	Q9H819	358 aa		8.88	□□□□□ -0.99
HDAC9-223	ENST00000476135	LMCD1	Q9NZU5	365 aa		8.88	□□□□□ -0.99
HDAC9-223	ENST00000476135	BRWD1	Q9NSI6	2320 aa		8.87	□□□□□ -0.99
HDAC9-223	ENST00000476135	SYNRG	Q9UMZ2	1314 aa		8.87	□□□□□ -0.99
HDAC9-223	ENST00000476135	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	8.87	□□□□□ -0.99
HDAC9-223	ENST00000476135		A0A0U1RQG5	324 aa	Predicted RBP	8.87	□□□□□ -0.99
HDAC9-223	ENST00000476135	VAMP4	O75379	141 aa		8.87	□□□□□ -0.99
HDAC9-223	ENST00000476135	DXO	O77932	396 aa	Known RBP	8.87	□□□□□ -0.99
HDAC9-223	ENST00000476135	CD4	P01730	458 aa		8.87	□□□□□ -0.99
HDAC9-223	ENST00000476135	CA3	P07451	260 aa		8.87	□□□□□ -0.99
HDAC9-223	ENST00000476135	ZNF865	P0CJ78	1059 aa	Predicted RBP	8.87	□□□□□ -0.99
HDAC9-223	ENST00000476135	VCAM1	P19320	739 aa		8.87	□□□□□ -0.99
HDAC9-223	ENST00000476135	ERCC3	P19447	782 aa		8.87	□□□□□ -0.99
HDAC9-223	ENST00000476135	CST5	P28325	142 aa	Predicted RBP	8.87	□□□□□ -0.99
HDAC9-223	ENST00000476135	GSTO1	P78417	241 aa		8.87	□□□□□ -0.99
HDAC9-223	ENST00000476135	GUCA2A	Q02747	115 aa		8.87	□□□□□ -0.99
HDAC9-223	ENST00000476135	HFE2	Q6ZVN8	426 aa		8.87	□□□□□ -0.99
HDAC9-223	ENST00000476135	TEX11	Q8IYF3	940 aa		8.87	□□□□□ -0.99
HDAC9-223	ENST00000476135	PRSS33	Q8NF86	280 aa		8.87	□□□□□ -0.99
HDAC9-223	ENST00000476135	ZNF384	Q8TF68	577 aa		8.87	□□□□□ -0.99
HDAC9-223	ENST00000476135	FEZ1	Q99689	392 aa		8.87	□□□□□ -0.99
HDAC9-223	ENST00000476135	PRRX2	Q99811	253 aa		8.87	□□□□□ -0.99

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