RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 PLA2G6O60733 806 aa13.42□□□□□ -0.26
NUDCD3-206ENST00000475952 COBLO75128 1261 aa13.42□□□□□ -0.26
NUDCD3-206ENST00000475952 TOP1P11387 765 aaKnown RBP13.42□□□□□ -0.26
NUDCD3-206ENST00000475952 CYBAP13498 195 aa13.42□□□□□ -0.26
NUDCD3-206ENST00000475952 MCCP23508 829 aa13.42□□□□□ -0.26
NUDCD3-206ENST00000475952 CNGA1P29973 690 aa13.42□□□□□ -0.26
NUDCD3-206ENST00000475952 NOVP48745 357 aa13.42□□□□□ -0.26
NUDCD3-206ENST00000475952 IMMTQ16891 758 aaKnown RBP13.42□□□□□ -0.26
NUDCD3-206ENST00000475952 LRRC26Q2I0M4 334 aa13.42□□□□□ -0.26
NUDCD3-206ENST00000475952 CCDC96Q2M329 555 aa13.42□□□□□ -0.26
NUDCD3-206ENST00000475952 KCTD1Q719H9 257 aa13.42□□□□□ -0.26
NUDCD3-206ENST00000475952 DCAF4Q8WV16 495 aa13.42□□□□□ -0.26
NUDCD3-206ENST00000475952 RUFY2Q8WXA3 655 aa13.42□□□□□ -0.26
NUDCD3-206ENST00000475952 PRDM6Q9NQX0 595 aa13.42□□□□□ -0.26
NUDCD3-206ENST00000475952 FBXO40Q9UH90 709 aa13.42□□□□□ -0.26
NUDCD3-206ENST00000475952 DDX20Q9UHI6 824 aaKnown RBP13.42□□□□□ -0.26
NUDCD3-206ENST00000475952 CTNNA3Q9UI47 895 aa13.42□□□□□ -0.26
NUDCD3-206ENST00000475952 MTMR7Q9Y216 660 aa13.42□□□□□ -0.26
NUDCD3-206ENST00000475952 NEDD4P46934 1319 aa13.41□□□□□ -0.26
NUDCD3-206ENST00000475952 BDP1A6H8Y1 2624 aa13.41□□□□□ -0.26
NUDCD3-206ENST00000475952 PGK2P07205 417 aa13.41□□□□□ -0.26
NUDCD3-206ENST00000475952 SLC4A3P48751 1232 aa13.41□□□□□ -0.26
NUDCD3-206ENST00000475952 RCSD1Q6JBY9 416 aa13.41□□□□□ -0.26
NUDCD3-206ENST00000475952 TMEM47Q9BQJ4 181 aa13.41□□□□□ -0.26
NUDCD3-206ENST00000475952 RAVER2Q9HCJ3 691 aaKnown RBP13.41□□□□□ -0.26
NUDCD3-206ENST00000475952 DIS3Q9Y2L1 958 aaKnown RBP13.41□□□□□ -0.26
NUDCD3-206ENST00000475952 IGHA2P01877 340 aa13.4□□□□□ -0.26
NUDCD3-206ENST00000475952 ZNF792Q3KQV3 632 aa13.4□□□□□ -0.26
NUDCD3-206ENST00000475952 CCDC178Q5BJE1 867 aa13.4□□□□□ -0.26
NUDCD3-206ENST00000475952 LHX8Q68G74 356 aa13.4□□□□□ -0.26
NUDCD3-206ENST00000475952 IQCA1Q86XH1 822 aa13.4□□□□□ -0.26
NUDCD3-206ENST00000475952 CHST13Q8NET6 341 aa13.4□□□□□ -0.26
NUDCD3-206ENST00000475952 CHMP4CQ96CF2 233 aa13.4□□□□□ -0.26
NUDCD3-206ENST00000475952 DDX11Q96FC9 970 aa13.4□□□□□ -0.26
NUDCD3-206ENST00000475952 TTC14Q96N46 770 aa13.4□□□□□ -0.26
NUDCD3-206ENST00000475952 TINF2Q9BSI4 451 aa13.4□□□□□ -0.26
NUDCD3-206ENST00000475952 RIPK3Q9Y572 518 aa13.4□□□□□ -0.26
NUDCD3-206ENST00000475952 KIAA1217Q5T5P2 1943 aa13.4□□□□□ -0.26
NUDCD3-206ENST00000475952 BAZ2BQ9UIF8 2168 aaKnown RBP13.39□□□□□ -0.27
NUDCD3-206ENST00000475952 NCOR1O75376 2440 aa13.39□□□□□ -0.27
NUDCD3-206ENST00000475952 SEPT4O43236 478 aa13.39□□□□□ -0.27
NUDCD3-206ENST00000475952 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.39□□□□□ -0.27
NUDCD3-206ENST00000475952 RASGRP2Q7LDG7 609 aa13.39□□□□□ -0.27
NUDCD3-206ENST00000475952 ANKRD35Q8N283 1001 aa13.39□□□□□ -0.27
NUDCD3-206ENST00000475952 MSL3Q8N5Y2 521 aaKnown RBP13.39□□□□□ -0.27
NUDCD3-206ENST00000475952 TRPV1Q8NER1 839 aa13.39□□□□□ -0.27
NUDCD3-206ENST00000475952 ACAD9Q9H845 621 aa13.39□□□□□ -0.27
NUDCD3-206ENST00000475952 CNNM2Q9H8M5 875 aa13.39□□□□□ -0.27
NUDCD3-206ENST00000475952 NRBP1Q9UHY1 535 aa13.39□□□□□ -0.27
NUDCD3-206ENST00000475952 PRR12Q9ULL5 1215 aa13.39□□□□□ -0.27
NUDCD3-206ENST00000475952 KDM4AO75164 1064 aa13.38□□□□□ -0.27
NUDCD3-206ENST00000475952 CHMLP26374 656 aa13.38□□□□□ -0.27
NUDCD3-206ENST00000475952 TKFCQ3LXA3 575 aa13.38□□□□□ -0.27
NUDCD3-206ENST00000475952 ZNF697Q5TEC3 545 aa13.38□□□□□ -0.27
NUDCD3-206ENST00000475952 MAFAQ8NHW3 353 aaPredicted RBP13.38□□□□□ -0.27
NUDCD3-206ENST00000475952 CDX2Q99626 313 aaPredicted RBP13.38□□□□□ -0.27
NUDCD3-206ENST00000475952 KRT23Q9C075 422 aa13.38□□□□□ -0.27
NUDCD3-206ENST00000475952 IL25Q9H293 177 aa13.38□□□□□ -0.27
NUDCD3-206ENST00000475952 HOMER2Q9NSB8 354 aa13.38□□□□□ -0.27
NUDCD3-206ENST00000475952 RNF146Q9NTX7 359 aa13.38□□□□□ -0.27
NUDCD3-206ENST00000475952 CNPY2Q9Y2B0 182 aa13.38□□□□□ -0.27
NUDCD3-206ENST00000475952 REV3LO60673 3130 aa13.38□□□□□ -0.27
NUDCD3-206ENST00000475952 ZNF536O15090 1300 aa13.38□□□□□ -0.27
NUDCD3-206ENST00000475952 FRMPD2Q68DX3 1309 aaPredicted RBP13.38□□□□□ -0.27
NUDCD3-206ENST00000475952 SYNGAP1Q96PV0 1343 aa13.38□□□□□ -0.27
NUDCD3-206ENST00000475952 CHD9Q3L8U1 2897 aa13.38□□□□□ -0.27
NUDCD3-206ENST00000475952 DNAJC25-GNG10A0A024R161 153 aa13.37□□□□□ -0.27
NUDCD3-206ENST00000475952 B4E1Z4 1266 aa13.37□□□□□ -0.27
NUDCD3-206ENST00000475952 DNM1LO00429 736 aa13.37□□□□□ -0.27
NUDCD3-206ENST00000475952 PDHBP11177 359 aa13.37□□□□□ -0.27
NUDCD3-206ENST00000475952 SYDE2Q5VT97 1194 aa13.37□□□□□ -0.27
NUDCD3-206ENST00000475952 CCDC174Q6PII3 467 aa13.37□□□□□ -0.27
NUDCD3-206ENST00000475952 CENPQQ7L2Z9 268 aaPredicted RBP13.37□□□□□ -0.27
NUDCD3-206ENST00000475952 ZNF467Q7Z7K2 595 aaPredicted RBP13.37□□□□□ -0.27
NUDCD3-206ENST00000475952 DGKHQ86XP1 1220 aa13.37□□□□□ -0.27
NUDCD3-206ENST00000475952 ZKSCAN3Q9BRR0 538 aa13.37□□□□□ -0.27
NUDCD3-206ENST00000475952 RANBP17Q9H2T7 1088 aaKnown RBP13.37□□□□□ -0.27
NUDCD3-206ENST00000475952 KBTBD13C9JR72 458 aa13.36□□□□□ -0.27
NUDCD3-206ENST00000475952 ICAM1P05362 532 aa13.36□□□□□ -0.27
NUDCD3-206ENST00000475952 SNHG28P0DPA3 235 aa13.36□□□□□ -0.27
NUDCD3-206ENST00000475952 RARBP10826 455 aa13.36□□□□□ -0.27
NUDCD3-206ENST00000475952 ALAS1P13196 640 aa13.36□□□□□ -0.27
NUDCD3-206ENST00000475952 TRDNQ13061 729 aa13.36□□□□□ -0.27
NUDCD3-206ENST00000475952 PRAMEF19Q5SWL8 479 aa13.36□□□□□ -0.27
NUDCD3-206ENST00000475952 GPATCH4Q5T3I0 446 aaKnown RBP13.36□□□□□ -0.27
NUDCD3-206ENST00000475952 BTNL9Q6UXG8 535 aa13.36□□□□□ -0.27
NUDCD3-206ENST00000475952 ARRDC4Q8NCT1 418 aa13.36□□□□□ -0.27
NUDCD3-206ENST00000475952 AGBL1Q96MI9 1066 aa13.36□□□□□ -0.27
NUDCD3-206ENST00000475952 TRERF1Q96PN7 1200 aa13.36□□□□□ -0.27
NUDCD3-206ENST00000475952 ZSCAN10Q96SZ4 725 aaPredicted RBP13.36□□□□□ -0.27
NUDCD3-206ENST00000475952 UBAC1Q9BSL1 405 aa13.36□□□□□ -0.27
NUDCD3-206ENST00000475952 KAT14Q9H8E8 782 aa13.36□□□□□ -0.27
NUDCD3-206ENST00000475952 PNMA2Q9UL42 364 aa13.36□□□□□ -0.27
NUDCD3-206ENST00000475952 CCPG1Q9ULG6 757 aa13.36□□□□□ -0.27
NUDCD3-206ENST00000475952 MYH7BA7E2Y1 1941 aa13.36□□□□□ -0.27
NUDCD3-206ENST00000475952 TNKSO95271 1327 aa13.36□□□□□ -0.27
NUDCD3-206ENST00000475952 SGSM2O43147 1006 aa13.35□□□□□ -0.27
NUDCD3-206ENST00000475952 AKR1A1P14550 325 aa13.35□□□□□ -0.27
NUDCD3-206ENST00000475952 SLC16A2P36021 539 aa13.35□□□□□ -0.27
NUDCD3-206ENST00000475952 ZNF543Q08ER8 600 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms