RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 PLEKHH3Q7Z736 793 aa17.64■□□□□ 0.41
SNX13-207ENST00000475800 SGMS1Q86VZ5 419 aa17.64■□□□□ 0.41
SNX13-207ENST00000475800 CHMP4CQ96CF2 233 aa17.64■□□□□ 0.41
SNX13-207ENST00000475800 PORCNQ9H237 461 aa17.64■□□□□ 0.41
SNX13-207ENST00000475800 STRNO43815 780 aa17.63■□□□□ 0.41
SNX13-207ENST00000475800 GJB1P08034 283 aa17.63■□□□□ 0.41
SNX13-207ENST00000475800 CASTP20810 708 aaKnown RBP17.63■□□□□ 0.41
SNX13-207ENST00000475800 GJA8P48165 433 aa17.63■□□□□ 0.41
SNX13-207ENST00000475800 FGD1P98174 961 aa17.63■□□□□ 0.41
SNX13-207ENST00000475800 TROAPQ12815 778 aa17.63■□□□□ 0.41
SNX13-207ENST00000475800 GRM4Q14833 912 aa17.63■□□□□ 0.41
SNX13-207ENST00000475800 WDR78Q5VTH9 848 aa17.63■□□□□ 0.41
SNX13-207ENST00000475800 TTBK2Q6IQ55 1244 aa17.63■□□□□ 0.41
SNX13-207ENST00000475800 CHRDL2Q6WN34 429 aa17.63■□□□□ 0.41
SNX13-207ENST00000475800 SYNE3Q6ZMZ3 975 aa17.63■□□□□ 0.41
SNX13-207ENST00000475800 ZNF654Q8IZM8 581 aa17.63■□□□□ 0.41
SNX13-207ENST00000475800 U2AF1L4Q8WU68 220 aaKnown RBP17.63■□□□□ 0.41
SNX13-207ENST00000475800 NUDT12Q9BQG2 462 aa17.63■□□□□ 0.41
SNX13-207ENST00000475800 SLC12A7Q9Y666 1083 aa17.63■□□□□ 0.41
SNX13-207ENST00000475800 BAZ2BQ9UIF8 2168 aaKnown RBP17.63■□□□□ 0.41
SNX13-207ENST00000475800 ZNF236Q9UL36 1845 aa17.63■□□□□ 0.41
SNX13-207ENST00000475800 SLC15A5A6NIM6 579 aa17.62■□□□□ 0.41
SNX13-207ENST00000475800 FARP2O94887 1054 aaPredicted RBP17.62■□□□□ 0.41
SNX13-207ENST00000475800 ERCC3P19447 782 aa17.62■□□□□ 0.41
SNX13-207ENST00000475800 RPS6KB1P23443 525 aa17.62■□□□□ 0.41
SNX13-207ENST00000475800 KIF5BP33176 963 aa17.62■□□□□ 0.41
SNX13-207ENST00000475800 SLC16A2P36021 539 aa17.62■□□□□ 0.41
SNX13-207ENST00000475800 IRF5Q13568 498 aa17.62■□□□□ 0.41
SNX13-207ENST00000475800 TKFCQ3LXA3 575 aa17.62■□□□□ 0.41
SNX13-207ENST00000475800 SNRNP48Q6IEG0 339 aaKnown RBP17.62■□□□□ 0.41
SNX13-207ENST00000475800 NCAPG2Q86XI2 1143 aa17.62■□□□□ 0.41
SNX13-207ENST00000475800 ABRAQ8N0Z2 381 aa17.62■□□□□ 0.41
SNX13-207ENST00000475800 CPXCR1Q8N123 301 aa17.62■□□□□ 0.41
SNX13-207ENST00000475800 FBXL16Q8N461 479 aa17.62■□□□□ 0.41
SNX13-207ENST00000475800 CTCFLQ8NI51 663 aaPredicted RBP17.62■□□□□ 0.41
SNX13-207ENST00000475800 DEFB118Q96PH6 123 aa17.62■□□□□ 0.41
SNX13-207ENST00000475800 RANBP17Q9H2T7 1088 aaKnown RBP17.62■□□□□ 0.41
SNX13-207ENST00000475800 SENP2Q9HC62 589 aa17.62■□□□□ 0.41
SNX13-207ENST00000475800 FBXO40Q9UH90 709 aa17.62■□□□□ 0.41
SNX13-207ENST00000475800 CYP46A1Q9Y6A2 500 aa17.62■□□□□ 0.41
SNX13-207ENST00000475800 TRIOBPQ9H2D6 2365 aa17.61■□□□□ 0.41
SNX13-207ENST00000475800 PALM3A6NDB9 673 aaPredicted RBP17.61■□□□□ 0.41
SNX13-207ENST00000475800 KLRF2D3W0D1 207 aa17.61■□□□□ 0.41
SNX13-207ENST00000475800 TFRCP02786 760 aaKnown RBP17.61■□□□□ 0.41
SNX13-207ENST00000475800 GOLGA8HP0CJ92 632 aa17.61■□□□□ 0.41
SNX13-207ENST00000475800 PTPREP23469 700 aa17.61■□□□□ 0.41
SNX13-207ENST00000475800 GNAQP50148 359 aa17.61■□□□□ 0.41
SNX13-207ENST00000475800 RCAN1P53805 252 aa17.61■□□□□ 0.41
SNX13-207ENST00000475800 RUFY3Q7L099 469 aa17.61■□□□□ 0.41
SNX13-207ENST00000475800 CHST13Q8NET6 341 aa17.61■□□□□ 0.41
SNX13-207ENST00000475800 LRRC2Q9BYS8 371 aa17.61■□□□□ 0.41
SNX13-207ENST00000475800 RAVER2Q9HCJ3 691 aaKnown RBP17.61■□□□□ 0.41
SNX13-207ENST00000475800 ZSWIM6Q9HCJ5 1215 aa17.61■□□□□ 0.41
SNX13-207ENST00000475800 MAD2L2Q9UI95 211 aa17.61■□□□□ 0.41
SNX13-207ENST00000475800 ICAM1P05362 532 aa17.6■□□□□ 0.41
SNX13-207ENST00000475800 RGS2P41220 211 aa17.6■□□□□ 0.41
SNX13-207ENST00000475800 FXR1P51114 621 aaKnown RBP eCLIP17.6■□□□□ 0.41
SNX13-207ENST00000475800 COL9A3Q14050 684 aaPredicted RBP17.6■□□□□ 0.41
SNX13-207ENST00000475800 MORN1Q5T089 497 aa17.6■□□□□ 0.41
SNX13-207ENST00000475800 NUP133Q8WUM0 1156 aa17.6■□□□□ 0.41
SNX13-207ENST00000475800 IL17RAQ96F46 866 aa17.6■□□□□ 0.41
SNX13-207ENST00000475800 LZTS2Q9BRK4 669 aa17.6■□□□□ 0.41
SNX13-207ENST00000475800 GPHNQ9NQX3 736 aaPredicted RBP17.6■□□□□ 0.41
SNX13-207ENST00000475800 SLC5A4Q9NY91 659 aa17.6■□□□□ 0.41
SNX13-207ENST00000475800 GJD2Q9UKL4 321 aa17.6■□□□□ 0.41
SNX13-207ENST00000475800 SMCHD1A6NHR9 2005 aa17.6■□□□□ 0.41
SNX13-207ENST00000475800 DHX16O60231 1041 aaKnown RBP17.59■□□□□ 0.41
SNX13-207ENST00000475800 SGPL1O95470 568 aa17.59■□□□□ 0.41
SNX13-207ENST00000475800 SEC24BO95487 1268 aa17.59■□□□□ 0.41
SNX13-207ENST00000475800 FCER1AP12319 257 aa17.59■□□□□ 0.41
SNX13-207ENST00000475800 XRCC5P13010 732 aaKnown RBP17.59■□□□□ 0.41
SNX13-207ENST00000475800 SMARCA1P28370 1054 aa17.59■□□□□ 0.41
SNX13-207ENST00000475800 GRB14Q14449 540 aa17.59■□□□□ 0.41
SNX13-207ENST00000475800 APOA5Q6Q788 366 aa17.59■□□□□ 0.41
SNX13-207ENST00000475800 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.59■□□□□ 0.41
SNX13-207ENST00000475800 TRMT44Q8IYL2 757 aaKnown RBP17.59■□□□□ 0.41
SNX13-207ENST00000475800 ADGRF4Q8IZF3 695 aa17.59■□□□□ 0.41
SNX13-207ENST00000475800 PXYLP1Q8TE99 480 aa17.59■□□□□ 0.41
SNX13-207ENST00000475800 TCEANC2Q96MN5 208 aa17.59■□□□□ 0.41
SNX13-207ENST00000475800 AGXT2Q9BYV1 514 aa17.59■□□□□ 0.41
SNX13-207ENST00000475800 UBA5Q9GZZ9 404 aa17.59■□□□□ 0.41
SNX13-207ENST00000475800 UPF2Q9HAU5 1272 aaKnown RBP17.59■□□□□ 0.41
SNX13-207ENST00000475800 ZNF536O15090 1300 aa17.58■□□□□ 0.4
SNX13-207ENST00000475800 TRIM32Q13049 653 aa17.58■□□□□ 0.4
SNX13-207ENST00000475800 TRAF1Q13077 416 aa17.58■□□□□ 0.4
SNX13-207ENST00000475800 MAP2K5Q13163 448 aa17.58■□□□□ 0.4
SNX13-207ENST00000475800 KCTD2Q14681 263 aa17.58■□□□□ 0.4
SNX13-207ENST00000475800 PPP2R5BQ15173 497 aa17.58■□□□□ 0.4
SNX13-207ENST00000475800 CCDC174Q6PII3 467 aa17.58■□□□□ 0.4
SNX13-207ENST00000475800 Q6ZUG5 572 aa17.58■□□□□ 0.4
SNX13-207ENST00000475800 STAG2Q8N3U4 1231 aa17.58■□□□□ 0.4
SNX13-207ENST00000475800 USP6NLQ92738 828 aa17.58■□□□□ 0.4
SNX13-207ENST00000475800 MMP19Q99542 508 aa17.58■□□□□ 0.4
SNX13-207ENST00000475800 APBA2Q99767 749 aa17.58■□□□□ 0.4
SNX13-207ENST00000475800 HTATIP2Q9BUP3 242 aa17.58■□□□□ 0.4
SNX13-207ENST00000475800 RBM28Q9NW13 759 aaKnown RBP17.58■□□□□ 0.4
SNX13-207ENST00000475800 CCPG1Q9ULG6 757 aa17.58■□□□□ 0.4
SNX13-207ENST00000475800 PLXNA1Q9UIW2 1896 aa17.58■□□□□ 0.4
SNX13-207ENST00000475800 ZBTB43O43298 467 aa17.57■□□□□ 0.4
SNX13-207ENST00000475800 HOXC6P09630 235 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms