RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 IRX5P78411 483 aaPredicted RBP29.63■■■□□ 2.33
TMEM54-205ENST00000475208 ARMCX2Q7L311 632 aa29.63■■■□□ 2.33
TMEM54-205ENST00000475208 FSD1Q9BTV5 496 aa29.63■■■□□ 2.33
TMEM54-205ENST00000475208 COL25A1Q9BXS0 654 aaPredicted RBP29.63■■■□□ 2.33
TMEM54-205ENST00000475208 NAPBQ9H115 298 aa29.63■■■□□ 2.33
TMEM54-205ENST00000475208 ABHD16BQ9H3Z7 469 aa29.63■■■□□ 2.33
TMEM54-205ENST00000475208 MCM3APO60318 1980 aa29.63■■■□□ 2.33
TMEM54-205ENST00000475208 ERC2O15083 957 aa29.62■■■□□ 2.33
TMEM54-205ENST00000475208 SLC3A2P08195 630 aaKnown RBP29.62■■■□□ 2.33
TMEM54-205ENST00000475208 C6orf222P0C671 652 aaPredicted RBP29.62■■■□□ 2.33
TMEM54-205ENST00000475208 TFAP4Q01664 338 aa29.62■■■□□ 2.33
TMEM54-205ENST00000475208 CCDC144BQ3MJ40 725 aa29.62■■■□□ 2.33
TMEM54-205ENST00000475208 PI4K2BQ8TCG2 481 aa29.62■■■□□ 2.33
TMEM54-205ENST00000475208 GLT1D1Q96MS3 346 aa29.62■■■□□ 2.33
TMEM54-205ENST00000475208 HOMER2Q9NSB8 354 aa29.62■■■□□ 2.33
TMEM54-205ENST00000475208 EYSQ5T1H1 3165 aa29.61■■■□□ 2.33
TMEM54-205ENST00000475208 TMEM232C9JQI7 657 aa29.61■■■□□ 2.33
TMEM54-205ENST00000475208 PPARAQ07869 468 aa29.61■■■□□ 2.33
TMEM54-205ENST00000475208 OTUD7AQ8TE49 926 aaPredicted RBP29.61■■■□□ 2.33
TMEM54-205ENST00000475208 MYLIPQ8WY64 445 aa29.61■■■□□ 2.33
TMEM54-205ENST00000475208 SPC25Q9HBM1 224 aa29.61■■■□□ 2.33
TMEM54-205ENST00000475208 ASGR1P07306 291 aa29.6■■■□□ 2.33
TMEM54-205ENST00000475208 FDX1P10109 184 aa29.6■■■□□ 2.33
TMEM54-205ENST00000475208 STAT2P52630 851 aa29.6■■■□□ 2.33
TMEM54-205ENST00000475208 ZMYM1Q5SVZ6 1142 aa29.6■■■□□ 2.33
TMEM54-205ENST00000475208 PCSK9Q8NBP7 692 aaKnown RBP29.6■■■□□ 2.33
TMEM54-205ENST00000475208 MAFAQ8NHW3 353 aaPredicted RBP29.6■■■□□ 2.33
TMEM54-205ENST00000475208 UPF3AQ9H1J1 476 aaKnown RBP29.6■■■□□ 2.33
TMEM54-205ENST00000475208 ACAD9Q9H845 621 aa29.6■■■□□ 2.33
TMEM54-205ENST00000475208 ELP1O95163 1332 aa29.6■■■□□ 2.33
TMEM54-205ENST00000475208 GJA9P57773 515 aa29.59■■■□□ 2.33
TMEM54-205ENST00000475208 CNTN2Q02246 1040 aa29.59■■■□□ 2.33
TMEM54-205ENST00000475208 CCDC144CPQ8IYA2 1237 aa29.59■■■□□ 2.33
TMEM54-205ENST00000475208 CHMP4CQ96CF2 233 aa29.59■■■□□ 2.33
TMEM54-205ENST00000475208 TBX21Q9UL17 535 aa29.59■■■□□ 2.33
TMEM54-205ENST00000475208 MROH7Q68CQ1 1323 aa29.59■■■□□ 2.33
TMEM54-205ENST00000475208 CDH23Q9H251 3354 aa29.58■■■□□ 2.33
TMEM54-205ENST00000475208 TIMP1P01033 207 aa29.58■■■□□ 2.33
TMEM54-205ENST00000475208 IKQ13123 557 aaPredicted RBP29.58■■■□□ 2.33
TMEM54-205ENST00000475208 FAM160B2Q86V87 743 aa29.58■■■□□ 2.33
TMEM54-205ENST00000475208 GMCL1Q96IK5 515 aa29.58■■■□□ 2.33
TMEM54-205ENST00000475208 KATNBL1Q9H079 304 aa29.58■■■□□ 2.33
TMEM54-205ENST00000475208 PCDHB15Q9Y5E8 787 aa29.58■■■□□ 2.33
TMEM54-205ENST00000475208 TMEM265A0A087WTH1 108 aa29.57■■■□□ 2.32
TMEM54-205ENST00000475208 SLC1A4P43007 532 aa29.57■■■□□ 2.32
TMEM54-205ENST00000475208 FAM133AQ8N9E0 248 aa29.57■■■□□ 2.32
TMEM54-205ENST00000475208 CHURC1Q8WUH1 139 aa29.57■■■□□ 2.32
TMEM54-205ENST00000475208 STAG1Q8WVM7 1258 aa29.57■■■□□ 2.32
TMEM54-205ENST00000475208 VTI1AQ96AJ9 217 aa29.57■■■□□ 2.32
TMEM54-205ENST00000475208 AGBL1Q96MI9 1066 aa29.57■■■□□ 2.32
TMEM54-205ENST00000475208 RNF146Q9NTX7 359 aa29.57■■■□□ 2.32
TMEM54-205ENST00000475208 ZNF536O15090 1300 aa29.56■■■□□ 2.32
TMEM54-205ENST00000475208 FOSL2P15408 326 aa29.56■■■□□ 2.32
TMEM54-205ENST00000475208 CDK7P50613 346 aa29.56■■■□□ 2.32
TMEM54-205ENST00000475208 GNASQ5JWF2 1037 aa29.56■■■□□ 2.32
TMEM54-205ENST00000475208 A1CFQ9NQ94 594 aaKnown RBP29.56■■■□□ 2.32
TMEM54-205ENST00000475208 A0A0U1RQG5 324 aaPredicted RBP29.55■■■□□ 2.32
TMEM54-205ENST00000475208 MCCP23508 829 aa29.55■■■□□ 2.32
TMEM54-205ENST00000475208 PPP4R3BQ5MIZ7 849 aa29.55■■■□□ 2.32
TMEM54-205ENST00000475208 STX8Q9UNK0 236 aa29.55■■■□□ 2.32
TMEM54-205ENST00000475208 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.55■■■□□ 2.32
TMEM54-205ENST00000475208 TSPY2A6NKD2 308 aa29.54■■■□□ 2.32
TMEM54-205ENST00000475208 ARVCFO00192 962 aa29.54■■■□□ 2.32
TMEM54-205ENST00000475208 MX1P20591 662 aa29.54■■■□□ 2.32
TMEM54-205ENST00000475208 MFSD5Q6N075 450 aa29.54■■■□□ 2.32
TMEM54-205ENST00000475208 CCDC129Q6ZRS4 1044 aa29.54■■■□□ 2.32
TMEM54-205ENST00000475208 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.53■■■□□ 2.32
TMEM54-205ENST00000475208 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.53■■■□□ 2.32
TMEM54-205ENST00000475208 SOWAHBA6NEL2 793 aa29.53■■■□□ 2.32
TMEM54-205ENST00000475208 CTAGE5O15320 804 aa29.53■■■□□ 2.32
TMEM54-205ENST00000475208 FOXP2O15409 715 aa29.53■■■□□ 2.32
TMEM54-205ENST00000475208 CTDSPL2Q05D32 466 aa29.53■■■□□ 2.32
TMEM54-205ENST00000475208 TKFCQ3LXA3 575 aa29.53■■■□□ 2.32
TMEM54-205ENST00000475208 KCTD1Q719H9 257 aa29.53■■■□□ 2.32
TMEM54-205ENST00000475208 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.53■■■□□ 2.32
TMEM54-205ENST00000475208 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.52■■■□□ 2.32
TMEM54-205ENST00000475208 ALAS1P13196 640 aa29.52■■■□□ 2.32
TMEM54-205ENST00000475208 DNAJB2P25686 324 aa29.52■■■□□ 2.32
TMEM54-205ENST00000475208 BEX3Q00994 111 aa29.52■■■□□ 2.32
TMEM54-205ENST00000475208 TNFAIP2Q03169 654 aa29.52■■■□□ 2.32
TMEM54-205ENST00000475208 PPIGQ13427 754 aaKnown RBP eCLIP29.52■■■□□ 2.32
TMEM54-205ENST00000475208 CCDC174Q6PII3 467 aa29.52■■■□□ 2.32
TMEM54-205ENST00000475208 NOL8Q76FK4 1167 aaKnown RBP29.52■■■□□ 2.32
TMEM54-205ENST00000475208 RASGRP2Q7LDG7 609 aa29.52■■■□□ 2.32
TMEM54-205ENST00000475208 FAM126BQ8IXS8 530 aa29.52■■■□□ 2.32
TMEM54-205ENST00000475208 TRERF1Q96PN7 1200 aa29.52■■■□□ 2.32
TMEM54-205ENST00000475208 INCENPQ9NQS7 918 aa29.52■■■□□ 2.32
TMEM54-205ENST00000475208 ASB14A6NK59 587 aa29.51■■■□□ 2.31
TMEM54-205ENST00000475208 NMT2O60551 498 aa29.51■■■□□ 2.31
TMEM54-205ENST00000475208 PLA2G6O60733 806 aa29.51■■■□□ 2.31
TMEM54-205ENST00000475208 SNAP25P60880 206 aa29.51■■■□□ 2.31
TMEM54-205ENST00000475208 NKX3-2P78367 333 aa29.51■■■□□ 2.31
TMEM54-205ENST00000475208 IL17RBQ9NRM6 502 aa29.51■■■□□ 2.31
TMEM54-205ENST00000475208 LRRC37A2A6NM11 1700 aa29.51■■■□□ 2.31
TMEM54-205ENST00000475208 PRUNE2Q8WUY3 3088 aa29.51■■■□□ 2.31
TMEM54-205ENST00000475208 ASTN1O14525 1302 aa29.5■■■□□ 2.31
TMEM54-205ENST00000475208 TLR3O15455 904 aaKnown RBP29.5■■■□□ 2.31
TMEM54-205ENST00000475208 RCSD1Q6JBY9 416 aa29.5■■■□□ 2.31
TMEM54-205ENST00000475208 PPP1R12CQ9BZL4 782 aa29.5■■■□□ 2.31
TMEM54-205ENST00000475208 PRR12Q9ULL5 1215 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms