RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 NEK1Q96PY6 1258 aa18.97■□□□□ 0.63
SRM-204ENST00000475189 MMP19Q99542 508 aa18.97■□□□□ 0.63
SRM-204ENST00000475189 UBA5Q9GZZ9 404 aa18.97■□□□□ 0.63
SRM-204ENST00000475189 CPVLQ9H3G5 476 aa18.97■□□□□ 0.63
SRM-204ENST00000475189 LY9Q9HBG7 655 aa18.97■□□□□ 0.63
SRM-204ENST00000475189 BAZ2BQ9UIF8 2168 aaKnown RBP18.96■□□□□ 0.63
SRM-204ENST00000475189 SH2B2O14492 632 aaPredicted RBP18.96■□□□□ 0.63
SRM-204ENST00000475189 EPB41L2O43491 1005 aaKnown RBP18.96■□□□□ 0.63
SRM-204ENST00000475189 PARP1P09874 1014 aaKnown RBP18.96■□□□□ 0.63
SRM-204ENST00000475189 KRT32Q14532 448 aa18.96■□□□□ 0.63
SRM-204ENST00000475189 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.96■□□□□ 0.63
SRM-204ENST00000475189 DPP9Q86TI2 863 aa18.96■□□□□ 0.63
SRM-204ENST00000475189 CHST13Q8NET6 341 aa18.96■□□□□ 0.63
SRM-204ENST00000475189 USP26Q9BXU7 913 aa18.96■□□□□ 0.63
SRM-204ENST00000475189 FLRT1Q9NZU1 646 aa18.96■□□□□ 0.63
SRM-204ENST00000475189 SNX14Q9Y5W7 946 aa18.96■□□□□ 0.63
SRM-204ENST00000475189 ICAM1P05362 532 aa18.95■□□□□ 0.62
SRM-204ENST00000475189 CCL5P13501 91 aa18.95■□□□□ 0.62
SRM-204ENST00000475189 EXOSC10Q01780 885 aaKnown RBP18.95■□□□□ 0.62
SRM-204ENST00000475189 TROAPQ12815 778 aa18.95■□□□□ 0.62
SRM-204ENST00000475189 KCTD2Q14681 263 aa18.95■□□□□ 0.62
SRM-204ENST00000475189 STAG2Q8N3U4 1231 aa18.95■□□□□ 0.62
SRM-204ENST00000475189 TMEM106CQ9BVX2 250 aa18.95■□□□□ 0.62
SRM-204ENST00000475189 LRRC2Q9BYS8 371 aa18.95■□□□□ 0.62
SRM-204ENST00000475189 UNC93B1Q9H1C4 597 aa18.95■□□□□ 0.62
SRM-204ENST00000475189 MAD2L2Q9UI95 211 aa18.95■□□□□ 0.62
SRM-204ENST00000475189 POTEFA5A3E0 1075 aa18.94■□□□□ 0.62
SRM-204ENST00000475189 PALM3A6NDB9 673 aaPredicted RBP18.94■□□□□ 0.62
SRM-204ENST00000475189 IGHA2P01877 340 aa18.94■□□□□ 0.62
SRM-204ENST00000475189 PGK2P07205 417 aa18.94■□□□□ 0.62
SRM-204ENST00000475189 ALAS1P13196 640 aa18.94■□□□□ 0.62
SRM-204ENST00000475189 LIFRP42702 1097 aa18.94■□□□□ 0.62
SRM-204ENST00000475189 GRM4Q14833 912 aa18.94■□□□□ 0.62
SRM-204ENST00000475189 TKFCQ3LXA3 575 aa18.94■□□□□ 0.62
SRM-204ENST00000475189 CATIPQ7Z7H3 387 aa18.94■□□□□ 0.62
SRM-204ENST00000475189 ADGRF4Q8IZF3 695 aa18.94■□□□□ 0.62
SRM-204ENST00000475189 TMTC2Q8N394 836 aa18.94■□□□□ 0.62
SRM-204ENST00000475189 TRERF1Q96PN7 1200 aa18.94■□□□□ 0.62
SRM-204ENST00000475189 HOMER2Q9NSB8 354 aa18.94■□□□□ 0.62
SRM-204ENST00000475189 RNF146Q9NTX7 359 aa18.94■□□□□ 0.62
SRM-204ENST00000475189 FBXO40Q9UH90 709 aa18.94■□□□□ 0.62
SRM-204ENST00000475189 CCPG1Q9ULG6 757 aa18.94■□□□□ 0.62
SRM-204ENST00000475189 WDR19Q8NEZ3 1342 aa18.94■□□□□ 0.62
SRM-204ENST00000475189 TAL1P17542 331 aaPredicted RBP18.93■□□□□ 0.62
SRM-204ENST00000475189 MLLT1Q03111 559 aaPredicted RBP18.93■□□□□ 0.62
SRM-204ENST00000475189 MAP3K21Q5TCX8 1036 aa18.93■□□□□ 0.62
SRM-204ENST00000475189 DHX32Q7L7V1 743 aaKnown RBP18.93■□□□□ 0.62
SRM-204ENST00000475189 RNF208Q9H0X6 261 aa18.93■□□□□ 0.62
SRM-204ENST00000475189 ACAD9Q9H845 621 aa18.93■□□□□ 0.62
SRM-204ENST00000475189 SLC5A4Q9NY91 659 aa18.93■□□□□ 0.62
SRM-204ENST00000475189 KLRF2D3W0D1 207 aa18.92■□□□□ 0.62
SRM-204ENST00000475189 CACNB2Q08289 660 aaPredicted RBP18.92■□□□□ 0.62
SRM-204ENST00000475189 ZNF792Q3KQV3 632 aa18.92■□□□□ 0.62
SRM-204ENST00000475189 MUM1L1Q5H9M0 696 aa18.92■□□□□ 0.62
SRM-204ENST00000475189 OLFML2BQ68BL8 750 aa18.92■□□□□ 0.62
SRM-204ENST00000475189 NFXL1Q6ZNB6 911 aa18.92■□□□□ 0.62
SRM-204ENST00000475189 ZNF654Q8IZM8 581 aa18.92■□□□□ 0.62
SRM-204ENST00000475189 DDX11Q96FC9 970 aa18.92■□□□□ 0.62
SRM-204ENST00000475189 MAML3Q96JK9 1138 aa18.92■□□□□ 0.62
SRM-204ENST00000475189 TCEANC2Q96MN5 208 aa18.92■□□□□ 0.62
SRM-204ENST00000475189 MAP3K14Q99558 947 aa18.92■□□□□ 0.62
SRM-204ENST00000475189 JMJD4Q9H9V9 463 aa18.92■□□□□ 0.62
SRM-204ENST00000475189 DNAJC25-GNG10A0A024R161 153 aa18.91■□□□□ 0.62
SRM-204ENST00000475189 CCDC69A6NI79 296 aa18.91■□□□□ 0.62
SRM-204ENST00000475189 DDAH1O94760 285 aa18.91■□□□□ 0.62
SRM-204ENST00000475189 HMGB1P09429 215 aaKnown RBP18.91■□□□□ 0.62
SRM-204ENST00000475189 PRKAR2AP13861 404 aaKnown RBP18.91■□□□□ 0.62
SRM-204ENST00000475189 CPA1P15085 419 aa18.91■□□□□ 0.62
SRM-204ENST00000475189 MFSD14CQ5VZR4 134 aa18.91■□□□□ 0.62
SRM-204ENST00000475189 ANKRD35Q8N283 1001 aa18.91■□□□□ 0.62
SRM-204ENST00000475189 JAKMIP1Q96N16 626 aaKnown RBP18.91■□□□□ 0.62
SRM-204ENST00000475189 MYL10Q9BUA6 226 aa18.91■□□□□ 0.62
SRM-204ENST00000475189 VAT1LQ9HCJ6 419 aa18.91■□□□□ 0.62
SRM-204ENST00000475189 DIS3Q9Y2L1 958 aaKnown RBP18.91■□□□□ 0.62
SRM-204ENST00000475189 MCM3APO60318 1980 aa18.91■□□□□ 0.62
SRM-204ENST00000475189 RPTORQ8N122 1335 aa18.91■□□□□ 0.62
SRM-204ENST00000475189 LCTP09848 1927 aa18.9■□□□□ 0.62
SRM-204ENST00000475189 GJB1P08034 283 aa18.9■□□□□ 0.62
SRM-204ENST00000475189 EN2P19622 333 aaPredicted RBP18.9■□□□□ 0.62
SRM-204ENST00000475189 CDC37Q16543 378 aaPredicted RBP18.9■□□□□ 0.62
SRM-204ENST00000475189 SLC35G1Q2M3R5 365 aa18.9■□□□□ 0.62
SRM-204ENST00000475189 SGMS1Q86VZ5 419 aa18.9■□□□□ 0.62
SRM-204ENST00000475189 NUP133Q8WUM0 1156 aa18.9■□□□□ 0.62
SRM-204ENST00000475189 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.9■□□□□ 0.625e-16■■■■■ 90.1
SRM-204ENST00000475189 HMX1Q9NP08 348 aaPredicted RBP18.9■□□□□ 0.62
SRM-204ENST00000475189 A1CFQ9NQ94 594 aaKnown RBP18.9■□□□□ 0.62
SRM-204ENST00000475189 PAK6Q9NQU5 681 aaPredicted RBP18.9■□□□□ 0.62
SRM-204ENST00000475189 PNMA2Q9UL42 364 aa18.9■□□□□ 0.62
SRM-204ENST00000475189 DHX16O60231 1041 aaKnown RBP18.89■□□□□ 0.61
SRM-204ENST00000475189 CYP2C19P33261 490 aa18.89■□□□□ 0.61
SRM-204ENST00000475189 QRICH1Q2TAL8 776 aa18.89■□□□□ 0.61
SRM-204ENST00000475189 MTMR8Q96EF0 704 aa18.89■□□□□ 0.61
SRM-204ENST00000475189 RIOX1Q9H6W3 641 aa18.89■□□□□ 0.61
SRM-204ENST00000475189 BRCA2P51587 3418 aa18.88■□□□□ 0.61
SRM-204ENST00000475189 CCND3P30281 292 aaPredicted RBP18.88■□□□□ 0.61
SRM-204ENST00000475189 GJA8P48165 433 aa18.88■□□□□ 0.61
SRM-204ENST00000475189 BLOC1S2Q6QNY1 142 aa18.88■□□□□ 0.61
SRM-204ENST00000475189 CTCFLQ8NI51 663 aaPredicted RBP18.88■□□□□ 0.61
SRM-204ENST00000475189 CLEC4DQ8WXI8 215 aa18.88■□□□□ 0.61
SRM-204ENST00000475189 SLC12A7Q9Y666 1083 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms