RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 DPYDQ12882 1025 aa24.66■■□□□ 1.54
CCM2-206ENST00000474617 CCDC96Q2M329 555 aa24.66■■□□□ 1.54
CCM2-206ENST00000474617 CCDC186Q7Z3E2 898 aa24.66■■□□□ 1.54
CCM2-206ENST00000474617 NIM1KQ8IY84 436 aa24.66■■□□□ 1.54
CCM2-206ENST00000474617 ADGRF4Q8IZF3 695 aa24.66■■□□□ 1.54
CCM2-206ENST00000474617 FAM151AQ8WW52 585 aa24.66■■□□□ 1.54
CCM2-206ENST00000474617 UBA5Q9GZZ9 404 aa24.66■■□□□ 1.54
CCM2-206ENST00000474617 TTC12Q9H892 705 aaPredicted RBP24.66■■□□□ 1.54
CCM2-206ENST00000474617 JMJD4Q9H9V9 463 aa24.66■■□□□ 1.54
CCM2-206ENST00000474617 PIM2Q9P1W9 311 aa24.66■■□□□ 1.54
CCM2-206ENST00000474617 DPEP1P16444 411 aa24.65■■□□□ 1.54
CCM2-206ENST00000474617 HOXA7P31268 230 aaPredicted RBP24.65■■□□□ 1.54
CCM2-206ENST00000474617 ICA1Q05084 483 aa24.65■■□□□ 1.54
CCM2-206ENST00000474617 TCP10Q12799 353 aa24.65■■□□□ 1.54
CCM2-206ENST00000474617 DLGAP5Q15398 846 aa24.65■■□□□ 1.54
CCM2-206ENST00000474617 RBM26Q5T8P6 1007 aaKnown RBP24.65■■□□□ 1.54
CCM2-206ENST00000474617 SH3BP5LQ7L8J4 393 aa24.65■■□□□ 1.54
CCM2-206ENST00000474617 ZFPM1Q8IX07 1006 aa24.65■■□□□ 1.54
CCM2-206ENST00000474617 KIAA1524Q8TCG1 905 aa24.65■■□□□ 1.54
CCM2-206ENST00000474617 CUL5Q93034 780 aa24.65■■□□□ 1.54
CCM2-206ENST00000474617 VAT1LQ9HCJ6 419 aa24.65■■□□□ 1.54
CCM2-206ENST00000474617 NRDCO43847 1150 aa24.64■■□□□ 1.53
CCM2-206ENST00000474617 POLD1P28340 1107 aa24.64■■□□□ 1.53
CCM2-206ENST00000474617 UBA7P41226 1012 aa24.64■■□□□ 1.53
CCM2-206ENST00000474617 SLC1A4P43007 532 aa24.64■■□□□ 1.53
CCM2-206ENST00000474617 RASGRP4Q8TDF6 673 aa24.64■■□□□ 1.53
CCM2-206ENST00000474617 RAB34Q9BZG1 259 aa24.64■■□□□ 1.53
CCM2-206ENST00000474617 TDRD3Q9H7E2 651 aaKnown RBP24.64■■□□□ 1.53
CCM2-206ENST00000474617 GPCPD1Q9NPB8 672 aa24.64■■□□□ 1.53
CCM2-206ENST00000474617 DISC1Q9NRI5 854 aa24.64■■□□□ 1.53
CCM2-206ENST00000474617 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.63■■□□□ 1.53
CCM2-206ENST00000474617 EEF2P13639 858 aaKnown RBP24.63■■□□□ 1.53
CCM2-206ENST00000474617 GCFC2P16383 781 aaKnown RBP24.63■■□□□ 1.53
CCM2-206ENST00000474617 PDXDC2PQ6P474 469 aa24.63■■□□□ 1.53
CCM2-206ENST00000474617 FAM83AQ86UY5 434 aa24.63■■□□□ 1.53
CCM2-206ENST00000474617 CCDC150Q8NCX0 1101 aa24.63■■□□□ 1.53
CCM2-206ENST00000474617 PRMT6Q96LA8 375 aaPredicted RBP24.63■■□□□ 1.53
CCM2-206ENST00000474617 A0A087X0B3 334 aa24.62■■□□□ 1.53
CCM2-206ENST00000474617 TBC1D12O60347 775 aa24.62■■□□□ 1.53
CCM2-206ENST00000474617 PTGS1P23219 599 aa24.62■■□□□ 1.53
CCM2-206ENST00000474617 EIF6P56537 245 aaKnown RBP24.62■■□□□ 1.53
CCM2-206ENST00000474617 NOLC1Q14978 699 aaKnown RBP eCLIP24.62■■□□□ 1.53
CCM2-206ENST00000474617 IL17AQ16552 155 aa24.62■■□□□ 1.53
CCM2-206ENST00000474617 SLFN13Q68D06 897 aa24.62■■□□□ 1.53
CCM2-206ENST00000474617 CSRNP1Q96S65 589 aa24.62■■□□□ 1.53
CCM2-206ENST00000474617 A0A087WWV3 80 aa24.61■■□□□ 1.53
CCM2-206ENST00000474617 FOXN1O15353 648 aa24.61■■□□□ 1.53
CCM2-206ENST00000474617 SLC26A4O43511 780 aa24.61■■□□□ 1.53
CCM2-206ENST00000474617 CCNT1O60563 726 aaKnown RBP24.61■■□□□ 1.53
CCM2-206ENST00000474617 PRR29P0C7W0 189 aa24.61■■□□□ 1.53
CCM2-206ENST00000474617 STAT6P42226 847 aa24.61■■□□□ 1.53
CCM2-206ENST00000474617 FANCCQ00597 558 aa24.61■■□□□ 1.53
CCM2-206ENST00000474617 ATP2B2Q01814 1243 aa24.61■■□□□ 1.53
CCM2-206ENST00000474617 SPDYE2Q495Y8 402 aa24.61■■□□□ 1.53
CCM2-206ENST00000474617 PPP4R3AQ6IN85 833 aa24.61■■□□□ 1.53
CCM2-206ENST00000474617 DEFB132Q7Z7B7 95 aa24.61■■□□□ 1.53
CCM2-206ENST00000474617 TBCKQ8TEA7 893 aa24.61■■□□□ 1.53
CCM2-206ENST00000474617 PSMD14O00487 310 aa24.61■■□□□ 1.53
CCM2-206ENST00000474617 BMP6P22004 513 aa24.61■■□□□ 1.53
CCM2-206ENST00000474617 CACNB3P54284 484 aa24.61■■□□□ 1.53
CCM2-206ENST00000474617 TMEM266Q2M3C6 531 aa24.61■■□□□ 1.53
CCM2-206ENST00000474617 RRAGBQ5VZM2 374 aa24.61■■□□□ 1.53
CCM2-206ENST00000474617 CPVLQ9H3G5 476 aa24.61■■□□□ 1.53
CCM2-206ENST00000474617 KCNF1Q9H3M0 494 aa24.61■■□□□ 1.53
CCM2-206ENST00000474617 CLK2P49760 499 aaKnown RBP24.6■■□□□ 1.53
CCM2-206ENST00000474617 LETM2Q2VYF4 491 aa24.6■■□□□ 1.53
CCM2-206ENST00000474617 ARHGEF10LQ9HCE6 1279 aa24.6■■□□□ 1.53
CCM2-206ENST00000474617 IFNKQ9P0W0 207 aa24.6■■□□□ 1.53
CCM2-206ENST00000474617 ZNF70Q9UC06 446 aaPredicted RBP24.6■■□□□ 1.53
CCM2-206ENST00000474617 ADAMTS3O15072 1205 aa24.59■■□□□ 1.53
CCM2-206ENST00000474617 PPP1R2P41236 205 aa24.59■■□□□ 1.53
CCM2-206ENST00000474617 FXR2P51116 673 aaKnown RBP eCLIP24.59■■□□□ 1.53
CCM2-206ENST00000474617 PDIA5Q14554 519 aa24.59■■□□□ 1.53
CCM2-206ENST00000474617 DALRD3Q5D0E6 543 aaKnown RBP24.59■■□□□ 1.53
CCM2-206ENST00000474617 BTNL9Q6UXG8 535 aa24.59■■□□□ 1.53
CCM2-206ENST00000474617 RASGRP2Q7LDG7 609 aa24.59■■□□□ 1.53
CCM2-206ENST00000474617 LRRC8AQ8IWT6 810 aa24.59■■□□□ 1.53
CCM2-206ENST00000474617 XPO4Q9C0E2 1151 aaKnown RBP24.59■■□□□ 1.53
CCM2-206ENST00000474617 MTFR1LQ9H019 292 aa24.59■■□□□ 1.53
CCM2-206ENST00000474617 SERPINC1P01008 464 aa24.58■■□□□ 1.53
CCM2-206ENST00000474617 LMOD1P29536 600 aaPredicted RBP24.58■■□□□ 1.53
CCM2-206ENST00000474617 AFMP43652 599 aa24.58■■□□□ 1.53
CCM2-206ENST00000474617 AMPD3Q01432 767 aa24.58■■□□□ 1.53
CCM2-206ENST00000474617 AP3B2Q13367 1082 aa24.58■■□□□ 1.53
CCM2-206ENST00000474617 KCNB1Q14721 858 aa24.58■■□□□ 1.53
CCM2-206ENST00000474617 SEPT2Q15019 361 aa24.58■■□□□ 1.53
CCM2-206ENST00000474617 ISM2Q6H9L7 571 aa24.58■■□□□ 1.53
CCM2-206ENST00000474617 CCDC47Q96A33 483 aaKnown RBP24.58■■□□□ 1.53
CCM2-206ENST00000474617 ZNF830Q96NB3 372 aaPredicted RBP24.58■■□□□ 1.53
CCM2-206ENST00000474617 HSD3B7Q9H2F3 369 aa24.58■■□□□ 1.53
CCM2-206ENST00000474617 TMEM60Q9H2L4 133 aa24.58■■□□□ 1.53
CCM2-206ENST00000474617 SH2D4AQ9H788 454 aa24.58■■□□□ 1.53
CCM2-206ENST00000474617 PSTPIP2Q9H939 334 aa24.58■■□□□ 1.53
CCM2-206ENST00000474617 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.58■■□□□ 1.53
CCM2-206ENST00000474617 ZNF277Q9NRM2 450 aaPredicted RBP24.58■■□□□ 1.53
CCM2-206ENST00000474617 PCDHAC2Q9Y5I4 1007 aa24.58■■□□□ 1.53
CCM2-206ENST00000474617 ARFGEF1Q9Y6D6 1849 aa24.58■■□□□ 1.53
CCM2-206ENST00000474617 F5H6K3 240 aa24.57■■□□□ 1.52
CCM2-206ENST00000474617 ZNF18P17022 549 aa24.57■■□□□ 1.52
CCM2-206ENST00000474617 RPS12P25398 132 aaKnown RBP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms