RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 ACAD9Q9H845 621 aa18.65■□□□□ 0.58
CDPF1-205ENST00000474256 PRR12Q9ULL5 1215 aa18.65■□□□□ 0.58
CDPF1-205ENST00000474256 SOX1O00570 391 aaPredicted RBP18.64■□□□□ 0.57
CDPF1-205ENST00000474256 MYCNP04198 464 aaPredicted RBP18.64■□□□□ 0.57
CDPF1-205ENST00000474256 TOP1P11387 765 aaKnown RBP18.64■□□□□ 0.57
CDPF1-205ENST00000474256 ADCYAP1R1P41586 468 aa18.64■□□□□ 0.57
CDPF1-205ENST00000474256 TKFCQ3LXA3 575 aa18.64■□□□□ 0.57
CDPF1-205ENST00000474256 C1orf53Q5VUE5 145 aa18.64■□□□□ 0.57
CDPF1-205ENST00000474256 CWC27Q6UX04 472 aaKnown RBP18.64■□□□□ 0.57
CDPF1-205ENST00000474256 MFSD6Q6ZSS7 791 aa18.64■□□□□ 0.57
CDPF1-205ENST00000474256 TMEM47Q9BQJ4 181 aa18.64■□□□□ 0.57
CDPF1-205ENST00000474256 HOMER2Q9NSB8 354 aa18.64■□□□□ 0.57
CDPF1-205ENST00000474256 PHF24Q9UPV7 400 aa18.64■□□□□ 0.57
CDPF1-205ENST00000474256 ZNFX1Q9P2E3 1918 aaKnown RBP18.63■□□□□ 0.57
CDPF1-205ENST00000474256 HIP1O00291 1037 aa18.63■□□□□ 0.57
CDPF1-205ENST00000474256 ADAMTS4O75173 837 aa18.63■□□□□ 0.57
CDPF1-205ENST00000474256 PGK1P00558 417 aa18.63■□□□□ 0.57
CDPF1-205ENST00000474256 BTNL9Q6UXG8 535 aa18.63■□□□□ 0.57
CDPF1-205ENST00000474256 RNF180Q86T96 592 aa18.63■□□□□ 0.57
CDPF1-205ENST00000474256 TBC1D10CQ8IV04 446 aa18.63■□□□□ 0.57
CDPF1-205ENST00000474256 FAM133AQ8N9E0 248 aa18.63■□□□□ 0.57
CDPF1-205ENST00000474256 TTC14Q96N46 770 aa18.63■□□□□ 0.57
CDPF1-205ENST00000474256 UBE2OQ9C0C9 1292 aaKnown RBP18.63■□□□□ 0.57
CDPF1-205ENST00000474256 A1CFQ9NQ94 594 aaKnown RBP18.63■□□□□ 0.57
CDPF1-205ENST00000474256 DIAPH3Q9NSV4 1193 aa18.63■□□□□ 0.57
CDPF1-205ENST00000474256 RNF146Q9NTX7 359 aa18.63■□□□□ 0.57
CDPF1-205ENST00000474256 FAM184BQ9ULE4 1060 aa18.63■□□□□ 0.57
CDPF1-205ENST00000474256 LAMA3Q16787 3333 aa18.62■□□□□ 0.57
CDPF1-205ENST00000474256 SNAP25P60880 206 aa18.62■□□□□ 0.57
CDPF1-205ENST00000474256 CNTN2Q02246 1040 aa18.62■□□□□ 0.57
CDPF1-205ENST00000474256 ACVR2BQ13705 512 aa18.62■□□□□ 0.57
CDPF1-205ENST00000474256 CCDC96Q2M329 555 aa18.62■□□□□ 0.57
CDPF1-205ENST00000474256 TDHQ8IZJ6 230 aa18.62■□□□□ 0.57
CDPF1-205ENST00000474256 FERMT2Q96AC1 680 aa18.62■□□□□ 0.57
CDPF1-205ENST00000474256 LENG1Q96BZ8 264 aaPredicted RBP18.62■□□□□ 0.57
CDPF1-205ENST00000474256 TRERF1Q96PN7 1200 aa18.62■□□□□ 0.57
CDPF1-205ENST00000474256 ABHD16BQ9H3Z7 469 aa18.62■□□□□ 0.57
CDPF1-205ENST00000474256 RNF41Q9H4P4 317 aaPredicted RBP18.62■□□□□ 0.57
CDPF1-205ENST00000474256 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.62■□□□□ 0.57
CDPF1-205ENST00000474256 ZHX1Q9UKY1 873 aaPredicted RBP18.62■□□□□ 0.57
CDPF1-205ENST00000474256 MTMR7Q9Y216 660 aa18.62■□□□□ 0.57
CDPF1-205ENST00000474256 ATP11BQ9Y2G3 1177 aa18.62■□□□□ 0.57
CDPF1-205ENST00000474256 POTEB2H3BUK9 544 aa18.61■□□□□ 0.57
CDPF1-205ENST00000474256 ZNF213O14771 459 aa18.61■□□□□ 0.57
CDPF1-205ENST00000474256 ALAS1P13196 640 aa18.61■□□□□ 0.57
CDPF1-205ENST00000474256 NT5C2P49902 561 aa18.61■□□□□ 0.57
CDPF1-205ENST00000474256 MDM2Q00987 491 aaPredicted RBP18.61■□□□□ 0.57
CDPF1-205ENST00000474256 LRIT3Q3SXY7 679 aa18.61■□□□□ 0.57
CDPF1-205ENST00000474256 TTBK2Q6IQ55 1244 aa18.61■□□□□ 0.57
CDPF1-205ENST00000474256 CCDC174Q6PII3 467 aa18.61■□□□□ 0.57
CDPF1-205ENST00000474256 ARMCX2Q7L311 632 aa18.61■□□□□ 0.57
CDPF1-205ENST00000474256 CCDC144CPQ8IYA2 1237 aa18.61■□□□□ 0.57
CDPF1-205ENST00000474256 ESR2Q92731 530 aa18.61■□□□□ 0.57
CDPF1-205ENST00000474256 LRCH3Q96II8 777 aa18.61■□□□□ 0.57
CDPF1-205ENST00000474256 RANBP17Q9H2T7 1088 aaKnown RBP18.61■□□□□ 0.57
CDPF1-205ENST00000474256 NEDD4P46934 1319 aa18.6■□□□□ 0.57
CDPF1-205ENST00000474256 DUSP11O75319 330 aaKnown RBP18.6■□□□□ 0.57
CDPF1-205ENST00000474256 ICAM1P05362 532 aa18.6■□□□□ 0.57
CDPF1-205ENST00000474256 PDHBP11177 359 aa18.6■□□□□ 0.57
CDPF1-205ENST00000474256 PDE4AP27815 886 aa18.6■□□□□ 0.57
CDPF1-205ENST00000474256 TRIM60Q495X7 471 aa18.6■□□□□ 0.57
CDPF1-205ENST00000474256 KLHDC9Q8NEP7 349 aa18.6■□□□□ 0.57
CDPF1-205ENST00000474256 TSEN34Q9BSV6 310 aaKnown RBP18.6■□□□□ 0.57
CDPF1-205ENST00000474256 DSCC1Q9BVC3 393 aa18.6■□□□□ 0.57
CDPF1-205ENST00000474256 KATNBL1Q9H079 304 aa18.6■□□□□ 0.57
CDPF1-205ENST00000474256 PRKAG2Q9UGJ0 569 aa18.6■□□□□ 0.57
CDPF1-205ENST00000474256 PLXNA1Q9UIW2 1896 aa18.6■□□□□ 0.57
CDPF1-205ENST00000474256 FRMPD2Q68DX3 1309 aaPredicted RBP18.59■□□□□ 0.57
CDPF1-205ENST00000474256 SYNRGQ9UMZ2 1314 aa18.59■□□□□ 0.57
CDPF1-205ENST00000474256 A0A1W2PQ45 241 aaPredicted RBP18.59■□□□□ 0.57
CDPF1-205ENST00000474256 A0A1W2PQY0 241 aa18.59■□□□□ 0.57
CDPF1-205ENST00000474256 SOWAHBA6NEL2 793 aa18.59■□□□□ 0.57
CDPF1-205ENST00000474256 SNHG28P0DPA3 235 aa18.59■□□□□ 0.57
CDPF1-205ENST00000474256 SLC16A2P36021 539 aa18.59■□□□□ 0.57
CDPF1-205ENST00000474256 MUM1L1Q5H9M0 696 aa18.59■□□□□ 0.57
CDPF1-205ENST00000474256 SYDE2Q5VT97 1194 aa18.59■□□□□ 0.57
CDPF1-205ENST00000474256 CCSAPQ6IQ19 270 aaPredicted RBP18.59■□□□□ 0.57
CDPF1-205ENST00000474256 LBHD1Q9BQE6 289 aaPredicted RBP18.59■□□□□ 0.57
CDPF1-205ENST00000474256 CCPG1Q9ULG6 757 aa18.59■□□□□ 0.57
CDPF1-205ENST00000474256 ADCY6O43306 1168 aa18.58■□□□□ 0.56
CDPF1-205ENST00000474256 GSPT1P15170 499 aaKnown RBP18.58■□□□□ 0.56
CDPF1-205ENST00000474256 CST5P28325 142 aaPredicted RBP18.58■□□□□ 0.56
CDPF1-205ENST00000474256 CCDC144BQ3MJ40 725 aa18.58■□□□□ 0.56
CDPF1-205ENST00000474256 DGKHQ86XP1 1220 aa18.58■□□□□ 0.56
CDPF1-205ENST00000474256 GPCPD1Q9NPB8 672 aa18.58■□□□□ 0.56
CDPF1-205ENST00000474256 CYP39A1Q9NYL5 469 aa18.58■□□□□ 0.56
CDPF1-205ENST00000474256 DNAH12Q6ZR08 3092 aa18.58■□□□□ 0.56
CDPF1-205ENST00000474256 ASTN1O14525 1302 aa18.57■□□□□ 0.56
CDPF1-205ENST00000474256 MOXD2PA6NHM9 499 aa18.57■□□□□ 0.56
CDPF1-205ENST00000474256 ASB14A6NK59 587 aa18.57■□□□□ 0.56
CDPF1-205ENST00000474256 ACLYP53396 1101 aa18.57■□□□□ 0.56
CDPF1-205ENST00000474256 TLE2Q04725 743 aa18.57■□□□□ 0.56
CDPF1-205ENST00000474256 ZNF543Q08ER8 600 aa18.57■□□□□ 0.56
CDPF1-205ENST00000474256 GPR153Q6NV75 609 aa18.57■□□□□ 0.56
CDPF1-205ENST00000474256 IL25Q9H293 177 aa18.57■□□□□ 0.56
CDPF1-205ENST00000474256 PDLIM7Q9NR12 457 aa18.57■□□□□ 0.56
CDPF1-205ENST00000474256 SMCHD1A6NHR9 2005 aa18.56■□□□□ 0.56
CDPF1-205ENST00000474256 MYADML2A6NDP7 307 aa18.56■□□□□ 0.56
CDPF1-205ENST00000474256 KDM4AO75164 1064 aa18.56■□□□□ 0.56
CDPF1-205ENST00000474256 GJA9P57773 515 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms