RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 GMPRP36959 345 aa8.38□□□□□ -1.07
GPNMB-209ENST00000474157 EIF5P55010 431 aaKnown RBP8.38□□□□□ -1.07
GPNMB-209ENST00000474157 INHBEP58166 350 aa8.38□□□□□ -1.07
GPNMB-209ENST00000474157 DDR1Q08345 913 aa8.38□□□□□ -1.07
GPNMB-209ENST00000474157 TAF7Q15545 349 aaPredicted RBP8.38□□□□□ -1.07
GPNMB-209ENST00000474157 CCDC85BQ15834 202 aaPredicted RBP8.38□□□□□ -1.07
GPNMB-209ENST00000474157 FOXD4L6Q3SYB3 417 aaPredicted RBP8.38□□□□□ -1.07
GPNMB-209ENST00000474157 GORABQ5T7V8 394 aa8.38□□□□□ -1.07
GPNMB-209ENST00000474157 FOXD4L3Q6VB84 417 aaPredicted RBP8.38□□□□□ -1.07
GPNMB-209ENST00000474157 HS2ST1Q7LGA3 356 aa8.38□□□□□ -1.07
GPNMB-209ENST00000474157 GALNT6Q8NCL4 622 aa8.38□□□□□ -1.07
GPNMB-209ENST00000474157 MIPOL1Q8TD10 442 aa8.38□□□□□ -1.07
GPNMB-209ENST00000474157 HDAC7Q8WUI4 952 aa8.38□□□□□ -1.07
GPNMB-209ENST00000474157 C17orf50Q8WW18 174 aa8.38□□□□□ -1.07
GPNMB-209ENST00000474157 EDARADDQ8WWZ3 215 aa8.38□□□□□ -1.07
GPNMB-209ENST00000474157 ZNF396Q96N95 335 aaPredicted RBP8.38□□□□□ -1.07
GPNMB-209ENST00000474157 ZFYVE1Q9HBF4 777 aa8.38□□□□□ -1.07
GPNMB-209ENST00000474157 JPH1Q9HDC5 661 aaPredicted RBP8.38□□□□□ -1.07
GPNMB-209ENST00000474157 GGT7Q9UJ14 662 aa8.38□□□□□ -1.07
GPNMB-209ENST00000474157 SOX13Q9UN79 622 aa8.38□□□□□ -1.07
GPNMB-209ENST00000474157 MYO5BQ9ULV0 1848 aa8.38□□□□□ -1.07
GPNMB-209ENST00000474157 A0A1B0GUA9 196 aa8.37□□□□□ -1.07
GPNMB-209ENST00000474157 EXOC5O00471 708 aa8.37□□□□□ -1.07
GPNMB-209ENST00000474157 CAND2O75155 1236 aa8.37□□□□□ -1.07
GPNMB-209ENST00000474157 WFS1O76024 890 aa8.37□□□□□ -1.07
GPNMB-209ENST00000474157 SASH1O94885 1247 aa8.37□□□□□ -1.07
GPNMB-209ENST00000474157 SNUPNO95149 360 aaKnown RBP8.37□□□□□ -1.07
GPNMB-209ENST00000474157 MBD3O95983 291 aa8.37□□□□□ -1.07
GPNMB-209ENST00000474157 MYBL2P10244 700 aa8.37□□□□□ -1.07
GPNMB-209ENST00000474157 HSPA6P17066 643 aa8.37□□□□□ -1.07
GPNMB-209ENST00000474157 ACTN2P35609 894 aa8.37□□□□□ -1.07
GPNMB-209ENST00000474157 RPS6KA3P51812 740 aa8.37□□□□□ -1.07
GPNMB-209ENST00000474157 MRPL12P52815 198 aaKnown RBP8.37□□□□□ -1.07
GPNMB-209ENST00000474157 NAP1L1P55209 391 aaKnown RBP8.37□□□□□ -1.07
GPNMB-209ENST00000474157 CCDC181Q5TID7 509 aa8.37□□□□□ -1.07
GPNMB-209ENST00000474157 GBP6Q6ZN66 633 aa8.37□□□□□ -1.07
GPNMB-209ENST00000474157 ACRBPQ8NEB7 543 aa8.37□□□□□ -1.07
GPNMB-209ENST00000474157 KIAA1524Q8TCG1 905 aa8.37□□□□□ -1.07
GPNMB-209ENST00000474157 ANKRD24Q8TF21 1146 aa8.37□□□□□ -1.07
GPNMB-209ENST00000474157 TTC9Q92623 222 aa8.37□□□□□ -1.07
GPNMB-209ENST00000474157 ERO1AQ96HE7 468 aa8.37□□□□□ -1.07
GPNMB-209ENST00000474157 ADAM19Q9H013 955 aa8.37□□□□□ -1.07
GPNMB-209ENST00000474157 SH2B1Q9NRF2 756 aaPredicted RBP8.37□□□□□ -1.07
GPNMB-209ENST00000474157 LRRFIP2Q9Y608 721 aaKnown RBP8.37□□□□□ -1.07
GPNMB-209ENST00000474157 ANKRD50Q9ULJ7 1429 aa8.37□□□□□ -1.07
GPNMB-209ENST00000474157 UTRNP46939 3433 aa8.36□□□□□ -1.07
GPNMB-209ENST00000474157 IQGAP3Q86VI3 1631 aa8.36□□□□□ -1.07
GPNMB-209ENST00000474157 FAM177BA6PVY3 158 aa8.36□□□□□ -1.07
GPNMB-209ENST00000474157 OIP5O43482 229 aa8.36□□□□□ -1.07
GPNMB-209ENST00000474157 ERLIN1O75477 346 aa8.36□□□□□ -1.07
GPNMB-209ENST00000474157 ZBTB7AO95365 584 aa8.36□□□□□ -1.07
GPNMB-209ENST00000474157 SLURP2P0DP57 97 aa8.36□□□□□ -1.07
GPNMB-209ENST00000474157 TNNT1P13805 278 aa8.36□□□□□ -1.07
GPNMB-209ENST00000474157 PECAM1P16284 738 aaPredicted RBP8.36□□□□□ -1.07
GPNMB-209ENST00000474157 FAAP100Q0VG06 881 aa8.36□□□□□ -1.07
GPNMB-209ENST00000474157 GPR162Q16538 588 aa8.36□□□□□ -1.07
GPNMB-209ENST00000474157 ZSCAN23Q3MJ62 389 aa8.36□□□□□ -1.07
GPNMB-209ENST00000474157 ZNF394Q53GI3 561 aa8.36□□□□□ -1.07
GPNMB-209ENST00000474157 RPS26P11Q5JNZ5 115 aaPredicted RBP8.36□□□□□ -1.07
GPNMB-209ENST00000474157 KANK3Q6NY19 840 aa8.36□□□□□ -1.07
GPNMB-209ENST00000474157 C20orf204Q6ZNR8 217 aa8.36□□□□□ -1.07
GPNMB-209ENST00000474157 CHSY3Q70JA7 882 aa8.36□□□□□ -1.07
GPNMB-209ENST00000474157 RNF214Q8ND24 703 aa8.36□□□□□ -1.07
GPNMB-209ENST00000474157 CCDC112Q8NEF3 446 aa8.36□□□□□ -1.07
GPNMB-209ENST00000474157 NOC4LQ9BVI4 516 aaKnown RBP8.36□□□□□ -1.07
GPNMB-209ENST00000474157 CLEC4MQ9H2X3 399 aaPredicted RBP8.36□□□□□ -1.07
GPNMB-209ENST00000474157 TMX1Q9H3N1 280 aa8.36□□□□□ -1.07
GPNMB-209ENST00000474157 JADE2Q9NQC1 790 aa8.36□□□□□ -1.07
GPNMB-209ENST00000474157 SEC31BQ9NQW1 1179 aa8.36□□□□□ -1.07
GPNMB-209ENST00000474157 BATF3Q9NR55 127 aa8.36□□□□□ -1.07
GPNMB-209ENST00000474157 ARGLU1Q9NWB6 273 aaPredicted RBP8.36□□□□□ -1.07
GPNMB-209ENST00000474157 CLIP2Q9UDT6 1046 aa8.36□□□□□ -1.07
GPNMB-209ENST00000474157 GPN3Q9UHW5 284 aaPredicted RBP8.36□□□□□ -1.07
GPNMB-209ENST00000474157 PCDHGB7Q9Y5F8 929 aa8.36□□□□□ -1.07
GPNMB-209ENST00000474157 HFM1A2PYH4 1435 aa8.36□□□□□ -1.07
GPNMB-209ENST00000474157 BRD4O60885 1362 aaPredicted RBP8.35□□□□□ -1.07
GPNMB-209ENST00000474157 ROCK1Q13464 1354 aa8.35□□□□□ -1.07
GPNMB-209ENST00000474157 ADGRB2O60241 1585 aa8.35□□□□□ -1.07
GPNMB-209ENST00000474157 RGPD1P0DJD0 1748 aa8.35□□□□□ -1.07
GPNMB-209ENST00000474157 SHISA8B8ZZ34 492 aa8.35□□□□□ -1.07
GPNMB-209ENST00000474157 M0R082 166 aa8.35□□□□□ -1.07
GPNMB-209ENST00000474157 KIF5CO60282 957 aa8.35□□□□□ -1.07
GPNMB-209ENST00000474157 CELA3AP09093 270 aa8.35□□□□□ -1.07
GPNMB-209ENST00000474157 BCRP11274 1271 aa8.35□□□□□ -1.07
GPNMB-209ENST00000474157 EPHA1P21709 976 aa8.35□□□□□ -1.07
GPNMB-209ENST00000474157 CDC27P30260 824 aa8.35□□□□□ -1.07
GPNMB-209ENST00000474157 ELF1P32519 619 aa8.35□□□□□ -1.07
GPNMB-209ENST00000474157 GYS2P54840 703 aa8.35□□□□□ -1.07
GPNMB-209ENST00000474157 MAP3K10Q02779 954 aa8.35□□□□□ -1.07
GPNMB-209ENST00000474157 PCDH1Q08174 1060 aa8.35□□□□□ -1.07
GPNMB-209ENST00000474157 SART3Q15020 963 aaKnown RBP8.35□□□□□ -1.07
GPNMB-209ENST00000474157 VN1R5Q7Z5H4 357 aa8.35□□□□□ -1.07
GPNMB-209ENST00000474157 TDRD7Q8NHU6 1098 aaKnown RBP8.35□□□□□ -1.07
GPNMB-209ENST00000474157 ZNF417Q8TAU3 575 aa8.35□□□□□ -1.07
GPNMB-209ENST00000474157 ZNF587Q96SQ5 575 aaPredicted RBP8.35□□□□□ -1.07
GPNMB-209ENST00000474157 TRIM56Q9BRZ2 755 aaKnown RBP8.35□□□□□ -1.07
GPNMB-209ENST00000474157 CEP44Q9C0F1 390 aa8.35□□□□□ -1.07
GPNMB-209ENST00000474157 TRPV5Q9NQA5 729 aa8.35□□□□□ -1.07
GPNMB-209ENST00000474157 INCENPQ9NQS7 918 aa8.35□□□□□ -1.07
GPNMB-209ENST00000474157 CCDC7Q96M83 1385 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms